# Immunoconjugated Magnetic Graphene for Exosome Capture in SARS-CoV-2 Pseudovirus-Infected Cells

**Authors:** Rosamaria Pennisi, Giulia Neri, Paola Trischitta, Marianna Costa, Claudio Stagno, Giuseppe Roscitano, Maria Teresa Sciortino, Anna Piperno

PMC · DOI: 10.3390/molecules31040612 · Molecules · 2026-02-10

## TL;DR

Researchers developed a new graphene-based method to isolate exosomes from cells infected with a SARS-CoV-2 pseudovirus, which could help study virus-host interactions and improve diagnostics.

## Contribution

The study introduces MAGU-anti-CD9, a novel magnetic graphene-based tool for selective exosome isolation in viral research.

## Key findings

- MAGU-anti-CD9 efficiently isolated CD9+ exosomes with canonical markers like ALIX, CD147, TSG101, and Flotillin-1.
- Exosomes from SARS-CoV-2 pseudovirus-infected cells showed enrichment in CD147, a potential cofactor in viral entry.
- The method supports molecular profiling of exosome subpopulations for virus-host interaction studies and diagnostics.

## Abstract

Graphene-based nanomaterials exhibit exceptional physicochemical properties that facilitate a range of diverse biomedical applications, including liquid biopsy. In this study, graphene-based magnetic units, termed MAGU (MAGnetic Units), were specifically engineered for the selective isolation of exosomes. Total extracellular vesicles were first enriched using ultracentrifugation, followed by immunomagnetic capture of CD9+ exosomes. MAGU functionalized with anti-CD9 antibody (MAGU-anti-CD9) efficiently recovered a CD9-positive exosome subpopulation expressing canonical markers ALIX, CD147, TSG101, and Flotillin-1, thereby confirming selective isolation performance. To investigate viral associated signaling, 293T cells were transduced with SARS-CoV-2 spike pseudovirus. This pseudovirus was engineered to express the SARS-CoV-2 spike protein, enabling simulation of viral entry and assessment of potential alterations in the exosomal profile induced by viral binding. Exosomes released by pseudovirus-transduced 293T cells were analyzed and compared to those from non-transduced controls. The MAGU-anti-CD9 complex selectively isolated a defined subset of CD9-positive vesicles enriched in the multifunctional transmembrane glycoprotein CD147, which has been proposed as a cofactor in SARS-CoV-2 entry. Comprehensive molecular profiling of selectively captured exosome subpopulations is expected to further support the application of MAGU technology in virus–host interaction research and liquid-biopsy-based diagnostics.

## Linked entities

- **Proteins:** CD9 (CD9 molecule), PDCD6IP (programmed cell death 6 interacting protein), BSG (basigin (Ok blood group)), TSG101 (tumor susceptibility 101), flot1.S (flotillin 1 S homeolog)
- **Diseases:** SARS-CoV-2 (MONDO:0100096)

## Full-text entities

- **Genes:** PDCD6IP (programmed cell death 6 interacting protein) [NCBI Gene 10015] {aka AIP1, ALIX, DRIP4, HP95, MCPH29}, BSG (basigin (Ok blood group)) [NCBI Gene 682] {aka 5F7, CD147, EMMPRIN, EMPRIN, HAb18G, OK}, HSPA8 (heat shock protein family A (Hsp70) member 8) [NCBI Gene 3312] {aka HEL-33, HEL-S-72p, HSC54, HSC70, HSC71, HSP71}, TSG101 (tumor susceptibility 101) [NCBI Gene 7251] {aka TSG10, VPS23}, CD81 (CD81 molecule) [NCBI Gene 975] {aka CVID6, S5.7, TAPA1, TSPAN28}, TIMD4 (T cell immunoglobulin and mucin domain containing 4) [NCBI Gene 91937] {aka SMUCKLER, TIM4}, CD9 (CD9 molecule) [NCBI Gene 928] {aka BTCC-1, DRAP-27, MIC3, MRP-1, TSPAN-29, TSPAN29}, CD63 (CD63 molecule) [NCBI Gene 967] {aka AD1, HOP-26, ME491, MLA1, OMA81H, Pltgp40}, FLOT1 (flotillin 1) [NCBI Gene 10211], CD82 (CD82 molecule) [NCBI Gene 3732] {aka 4F9, C33, GR15, IA4, KAI1, R2}, CANX (calnexin) [NCBI Gene 821] {aka CNX, IP90, P90}, S (surface glycoprotein) [NCBI Gene 43740568] {aka spike glycoprotein}, POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}
- **Diseases:** infection (MESH:D007239), COVID-19 (MESH:D000086382), Viral infections (MESH:D014777), coronavirus infections (MESH:D018352), tumor (MESH:D009369), injury to (MESH:D014947), inflammatory (MESH:D007249), acute monocytic leukaemia (MESH:D007948), hypoxic (MESH:D002534)
- **Chemicals:** Lipofectamine (MESH:C086724), amine (MESH:D000588), phosphatidylserine (MESH:D010718), N-(3-Dimethylaminopropyl)-N'-ethylcarbodiimide (MESH:C569779), oil (MESH:D009821), Graphene (MESH:D006108), 5-mC (-), 1-Pyreneacetic acid (MESH:C551339), Copper (II) sulfate (MESH:D019327), 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (MESH:D005022), KCl (MESH:D011189), Tween-20 (MESH:D011136), PBS (MESH:D007854), D-glucose (MESH:D005947), steam (MESH:D013227), Magnesium (MESH:D008274), EDC (MESH:C024565), Calcium (MESH:D002118), CO2 (MESH:D002245), CO (MESH:D002248), NP-40 (MESH:C010615), GO (MESH:C000628730), PEG (MESH:D011092), Coomassie Brilliant Blue (MESH:C004692), FeCl3 (MESH:C024555), carbon (MESH:D002244), methanol (MESH:D000432), sodium deoxycholate (MESH:D003840), NaCl (MESH:D012965), magnetite (MESH:D052203), ammonia (MESH:D000641), iron salt (MESH:C000499), 2-(N-morpholino) ethanesulfonic acid (MESH:C004550), SDS (MESH:D012967), ethanol (MESH:D000431), N-Hydroxysuccinimide (MESH:C001426), 5-methylcytosine (MESH:D044503), water (MESH:D014867), iron (MESH:D007501), TBS (MESH:D013725), carbodiimide (MESH:D002234)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090], Human immunodeficiency virus 1 (no rank) [taxon 11676], Mycoplasma (genus) [taxon 2093], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049]
- **Cell lines:** THP-1 — Homo sapiens (Human), Childhood acute monocytic leukemia, Cancer cell line (CVCL_0006), VERO — Chlorocebus sabaeus (Green monkey), Spontaneously immortalized cell line (CVCL_0059), 293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), BSL-2 — Homo sapiens (Human), Bloom syndrome, Transformed cell line (CVCL_2869)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12942906/full.md

## References

44 references — full list in the complete paper: https://tomesphere.com/paper/PMC12942906/full.md

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Source: https://tomesphere.com/paper/PMC12942906