# Genetic Polymorphism of IL-1A, IL-1B and TNFA Predicting the Presence of Periodontopathogenic Bacteria

**Authors:** Nina Kalajzic, Ajka Pribisalic, Marina Adriana Jezina Buselic, Samra Prentic Bakic, Dunja Petricic, Ferdinand Josip Buselic, Davorka Sutlovic, Sendi Kuret

PMC · DOI: 10.3390/jcm15041646 · Journal of Clinical Medicine · 2026-02-22

## TL;DR

This study finds that genetic variations in IL-1A and IL-1B are linked to the presence of certain bacteria in periodontitis, suggesting a genetic influence on disease progression.

## Contribution

The study identifies specific cytokine gene polymorphisms associated with periodontopathogenic bacteria in a Croatian population.

## Key findings

- The IL-1A CC genotype increases odds of P. gingivalis and T. denticola presence.
- The IL-1B CC genotype is independently associated with T. forsythia presence.
- TNFA polymorphism showed no significant associations with periodontal bacteria.

## Abstract

Background/Objectives: Periodontitis is a chronic inflammatory disease characterized by complex interactions between periodontal pathogens and the host immune response. Pro-inflammatory cytokines, particularly interleukins, may influence bacterial colonization and disease expression, but their association with specific periodontal pathogens remains unclear. This study investigated the associations between single-nucleotide polymorphisms in IL-1A, IL-1B, and TNFA and the presence of key periodontopathogenic bacteria in patients from Croatia. Methods: A cross-sectional study included 63 participants. Genotypes were determined, and subgingival plaque samples were analyzed for Aggregatibacter actinomycetemcomitans, Porphyromonas gingivalis, Prevotella intermedia, Tannerella forsythia, and Treponema denticola using real-time PCR. Multivariable logistic regression models assessed associations between cytokine gene polymorphisms and periodontopathogenic bacteria presence, adjusting for age, gender, smoking status, and the presence of systemic diseases. Results: Among participants (median age 57.0 years, IQR 43.5–67.0; 58.7% female), P. intermedia (87.3%), T. forsythia (85.7%), and T. denticola (69.8%) were the most prevalent pathogens. The IL-1A CC genotype significantly increased the odds of P. gingivalis (OR = 5.54; p = 0.009) and T. denticola (OR = 3.77; p = 0.041) presence. The IL-1B CC genotype was independently associated with T. forsythia (OR = 8.48; p = 0.026). No significant associations were observed for TNFA polymorphism. Model performance ranged from moderate to good (AUC up to 0.89). Conclusions: Genetic variants in IL-1A and IL-1B may influence periodontal bacterial colonization, while demographic and lifestyle factors showed limited impact. Further studies in larger cohorts are warranted.

## Linked entities

- **Genes:** IL1A (interleukin 1 alpha) [NCBI Gene 3552], IL1B (interleukin 1 beta) [NCBI Gene 3553], TNF (tumor necrosis factor) [NCBI Gene 7124]
- **Diseases:** periodontitis (MONDO:0005076)
- **Species:** Aggregatibacter actinomycetemcomitans (taxon 714), Porphyromonas gingivalis (taxon 837), Prevotella intermedia (taxon 28131), Tannerella forsythia (taxon 28112), Treponema denticola (taxon 158)

## Full-text entities

- **Genes:** IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, IL1A (interleukin 1 alpha) [NCBI Gene 3552] {aka IL-1 alpha, IL-1A, IL1, IL1-ALPHA, IL1F1}
- **Diseases:** systemic disease (MESH:D034721), attachment loss (MESH:D017622), bone resorption (MESH:D001862), bleeding (MESH:D006470), dysbiosis (MESH:D064806), diabetes mellitus (MESH:D003920), tooth loss (MESH:D016388), chronic inflammation (MESH:D007249), Periodontitis (MESH:D010518), injury to (MESH:D014947), snoring (MESH:D012913), tissue damage (MESH:D017695), impaired oral function (MESH:D003072), Periodontal disease (MESH:D010510), necrosis (MESH:D009336), hypercholesterolemia (MESH:D006937), chronic periodontitis (MESH:D055113), T. forsythia (MESH:D001260), cardiovascular diseases (MESH:D002318), infection (MESH:D007239), aggressive periodontitis (MESH:D010520), elevated blood pressure (MESH:D006973), rheumatoid arthritis (MESH:D001172)
- **Chemicals:** ethanol (MESH:D000431), water (MESH:D014867), EDTA (MESH:D004492), saline (MESH:D012965), lipopolysaccharides (MESH:D008070), SYBR Green (MESH:C098022)
- **Species:** Prevotella intermedia (species) [taxon 28131], Treponema denticola (species) [taxon 158], Aggregatibacter actinomycetemcomitans (species) [taxon 714], Homo sapiens (human, species) [taxon 9606], Tannerella forsythia (species) [taxon 28112], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Porphyromonas gingivalis (species) [taxon 837]
- **Mutations:** G-174C, rs419598, -857C/T, -238G/A, -863C/A, -889 C, -308 G/A, +3954 T, C/T, -1031T/C

## Full text

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## Figures

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## References

46 references — full list in the complete paper: https://tomesphere.com/paper/PMC12941413/full.md

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Source: https://tomesphere.com/paper/PMC12941413