# Naringin Alleviates Knee Osteoarthritis by Targeting TNF-α and PTGS2: An Integrated Network Pharmacology, Molecular Simulation, and Experimental Validation Study

**Authors:** Haidong Zhou, Junjie Zhou, Yaohong Lu, Hui Luo, Wentao Hu, Jiefei Xie, Xinping Wu, Bo Li, Shaoyong Fan, Yuwen Chen, Fengting Zhang

PMC · DOI: 10.3390/ijms27041812 · International Journal of Molecular Sciences · 2026-02-13

## TL;DR

Naringin, a compound in citrus fruits, reduces knee osteoarthritis inflammation by targeting key proteins TNF-α and PTGS2, as shown through simulations and experiments.

## Contribution

This study reveals naringin's anti-inflammatory mechanism in KOA by integrating network pharmacology, simulations, and experimental validation.

## Key findings

- Naringin targets TNF-α and PTGS2, key inflammatory mediators in knee osteoarthritis.
- Naringin improves chondrocyte viability and reduces TNF-α and PTGS2 expression in vitro.
- Molecular simulations confirm stable interactions between naringin and inflammatory proteins.

## Abstract

Knee osteoarthritis (KOA) is a chronic degenerative joint disorder driven largely by persistent inflammation and progressive cartilage damage. Naringin, a bioactive flavonoid abundant in citrus fruits, has shown potential anti-inflammatory effects; however, its molecular mechanisms in KOA remain unclear. In this study, an integrated approach combining network pharmacology, molecular docking, molecular dynamics (MD) simulations, and in vitro experiments was employed to investigate the anti-inflammatory effects of naringin in KOA. Network pharmacology analysis identified 59 potential KOA-related targets of naringin, among which TNF, PTGS2, TP53, CASP3, and PPARG were recognized as core targets. Functional enrichment indicated these targets were primarily associated with inflammation- and apoptosis-related pathways, especially the TNF and IL-17 signaling pathways. Molecular docking and MD simulations revealed strong binding affinity and stable interactions between naringin and the key inflammatory mediators TNF-α and PTGS2. In an IL-1β-stimulated C28/I2 human chondrocyte model, naringin dose-dependently improved cell viability and significantly suppressed TNF-α and PTGS2 expression at both mRNA and protein levels. These findings provide mechanistic evidence that naringin alleviates KOA-associated chondrocyte inflammation by modulating key inflammatory mediators, supporting its potential as an anti-inflammatory therapeutic candidate for KOA.

## Linked entities

- **Genes:** TNF (tumor necrosis factor) [NCBI Gene 7124], PTGS2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 5743], TP53 (tumor protein p53) [NCBI Gene 7157], CASP3 (caspase 3) [NCBI Gene 836], PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468]
- **Proteins:** TNF (tumor necrosis factor), PTGS2 (prostaglandin-endoperoxide synthase 2)
- **Chemicals:** naringin (PubChem CID 442428)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, PTGS2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 5743] {aka COX-2, COX2, GRIPGHS, PGG/HS, PGHS-2, PHS-2}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, COX2 (cytochrome c oxidase subunit II) [NCBI Gene 4513] {aka COII, MTCO2}, BLNK (B cell linker) [NCBI Gene 29760] {aka AGM4, BASH, BLNK-S, LY57, SLP-65, SLP65}, MMP2 (matrix metallopeptidase 2) [NCBI Gene 4313] {aka CLG4, CLG4A, MMP-2, MMP-II, MONA, TBE-1}, CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, IL1B (interleukin 1 beta) [NCBI Gene 403974] {aka IL-1}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, IL17A (interleukin 17A) [NCBI Gene 3605] {aka CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17}, PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468] {aka CIMT1, FPLD3, GLM1, NR1C3, PPARG1, PPARG2}, ESR1 (estrogen receptor 1) [NCBI Gene 2099] {aka ER, ESR, ESRA, ESTRR, Era, NR3A1}
- **Diseases:** pain (MESH:D010146), Inflammatory (MESH:D007249), degenerative (MESH:D019636), injury to (MESH:D014947), inflammatory damage (MESH:D018746), cancer (MESH:D009369), hypoxia (MESH:D000860), cartilage damage (MESH:D002357), OA (MESH:D010003), metabolic disorders (MESH:D008659), atherosclerosis (MESH:D050197), Cytotoxicity (MESH:D064420), joint dysfunction (MESH:D007592), articular (MESH:D057072), KOA (MESH:D020370), cardiovascular diseases (MESH:D002318), gastrointestinal, cardiovascular, hepatic, and renal toxicity (MESH:D005767), degeneration (MESH:D009410), degradation (MESH:D055959), disability (MESH:D009069), infectious disease (MESH:D003141)
- **Chemicals:** streptomycin (MESH:D013307), estradiol (MESH:D004958), prostaglandin (MESH:D011453), PGE2 (MESH:D015232), TRIzol (MESH:C411644), water (MESH:D014867), CCK-8 (MESH:D012844), SDS (MESH:D012967), Na+ (MESH:D012964), penicillin (MESH:D010406), Naringin (MESH:C005274), CK04 (-), Cl- (MESH:D002713), Celecoxib (MESH:D000068579), PC (MESH:C053518), lipid (MESH:D008055), SYBR Green (MESH:C098022), CO2 (MESH:D002245), flavonoid (MESH:D005419), Hydrogen (MESH:D006859), PVDF (MESH:C024865)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** P0012S
- **Cell lines:** KOA — Homo sapiens (Human), Prostate carcinoma, Cancer cell line (CVCL_6E89), C28/I2 — Homo sapiens (Human), Transformed cell line (CVCL_0187)

## Full text

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## Figures

14 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12941286/full.md

## References

36 references — full list in the complete paper: https://tomesphere.com/paper/PMC12941286/full.md

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Source: https://tomesphere.com/paper/PMC12941286