# Fetal Hemoglobin Modulation in Sickle Cell Disease: βs Haplotypes, Key Polymorphisms Identified by GWAS, and Advances in γ-Globin Editing: An Updated Overview

**Authors:** Yusselfy Márquez-Benitez, Valeria Isabela Osorio-Garzón, Jaime Eduardo Bernal-Villegas, Ignacio Briceño-Balcázar

PMC · DOI: 10.3390/genes17020135 · Genes · 2026-01-27

## TL;DR

This review summarizes how fetal hemoglobin can be modulated to treat sickle cell disease, focusing on genetic factors and new gene-editing techniques.

## Contribution

The paper provides an updated overview of βs haplotypes, GWAS findings, and emerging γ-globin editing strategies for sickle cell disease.

## Key findings

- Key regulatory loci like BCL11A and HBS1L-MYB significantly influence HbF variability.
- Variants in KLF1, NFIX, BACH2, and ZBTB7A are emerging as modulators of HbF in specific populations.
- Prime editing shows promise for introducing multiple HPFH-like mutations in γ-globin promoters.

## Abstract

Fetal hemoglobin (HbF) plays a central role in mitigating the pathophysiological effects of sickle cell disease (SCD). Understanding the genetic determinants influencing HbF expression is essential for identifying the factors contributing to its modulation. This review provides an updated synthesis of evidence on HbF modulation, focusing on βs haplotypes and their molecular characterization through Sanger sequencing, polymorphisms consistently associated with HbF levels in genome-wide association studies (GWAS), and recent advances in gene editing targeting HbF expression. An integrative review (2016–2025) was conducted using PubMed/MEDLINE, Scopus, and Web of Science, encompassing original research, experimental studies, systematic reviews, and genomic analyses. Key regulatory loci such as BCL11A, HBS1L-MYB (HMIP), and the HBB cluster explain a significant proportion of HbF variability across populations. Furthermore, additional variants in KLF1, NFIX, BACH2, and ZBTB7A have emerged as potential modulators in specific cohorts. Regarding advances in γ-globin editing, “prime editing”, although still in the experimental phase, has recently emerged as an innovative approach capable of introducing multiple HPFH-like mutations within γ-globin promoters, expanding future therapeutic possibilities in SCD. This review also provides a comparative overview of prime editing and other gene-editing strategies for HbF modulation, such as CRISPR-Cas9 and Base editing. Collectively, this work outlines the current landscape of HbF modulation and provides an informative basis for future research aimed at advancing precision-oriented therapeutic strategies in sickle cell disease.

## Linked entities

- **Genes:** BCL11A (BCL11 transcription factor A) [NCBI Gene 53335], KLF1 (KLF transcription factor 1) [NCBI Gene 10661], NFIX (nuclear factor I X) [NCBI Gene 4784], BACH2 (BACH transcriptional regulator 2) [NCBI Gene 60468], ZBTB7A (zinc finger and BTB domain containing 7A) [NCBI Gene 51341], HBB (hemoglobin subunit beta) [NCBI Gene 3043]
- **Diseases:** sickle cell disease (MONDO:0011382)

## Full-text entities

- **Genes:** ZBTB7A (zinc finger and BTB domain containing 7A) [NCBI Gene 51341] {aka FBI-1, FBI1, LRF, MNDLFH, TIP21, ZBTB7}, MYB (MYB proto-oncogene, transcription factor) [NCBI Gene 4602] {aka Cmyb, c-myb, c-myb_CDS, efg}, HBG1 (hemoglobin subunit gamma 1) [NCBI Gene 3047] {aka HBG-T2, HBGA, HBGR, HSGGL1, PRO2979}, HBS1L (HBS1 like translational GTPase) [NCBI Gene 10767] {aka EF-1a, ERFS, HBS1, HSPC276, eRF3c}, HBB (hemoglobin subunit beta) [NCBI Gene 3043] {aka CD113t-C, ECYT6, beta-globin}, MIPEP (mitochondrial intermediate peptidase) [NCBI Gene 4285] {aka COXPD31, HMIP, MIP}, NFIX (nuclear factor I X) [NCBI Gene 4784] {aka CTF, MALNS, MRSHSS, NF-I/X, NF1-X, NF1A}, KLF1 (KLF transcription factor 1) [NCBI Gene 10661] {aka CDAN4A, CDAN4B, EKLF, EKLF/KLF1}, BCL11A (BCL11 transcription factor A) [NCBI Gene 53335] {aka CTIP1, DILOS, EVI9, HBFQTL5, SMARCM1, ZNF856}, BACH2 (BACH transcriptional regulator 2) [NCBI Gene 60468] {aka BTBD25, IMD60}
- **Diseases:** cholelithiasis (MESH:D002769), infarction (MESH:D007238), sickle hemoglobin (MESH:D006450), SCD (MESH:D000755), hepatitis (MESH:D056486), infections (MESH:D007239), Hereditary Persistence of Fetal Hemoglobin (OMIM:617101), vaso-occlusion (MESH:D001157), HSPCs (MESH:D019337), ischemia (MESH:D007511), hemolysis (MESH:D006461), hypoxic (MESH:D002534), organ injury (MESH:D009102), beta-thalassemia (MESH:D017086), congenital hemolytic anemia (MESH:D000745), iron overload (MESH:D019190), chronic liver disease (MESH:D008107), injury (MESH:D014947)
- **Chemicals:** oxygen (MESH:D010100)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** Rs7606173, rs6706648, rs766432, rs10195871, C   T, rs7776054, rs7775698, Rs7482144, rs3834466, rs1427407, rs9399137, rs4671393, c.20 A > T

## Full text

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## References

60 references — full list in the complete paper: https://tomesphere.com/paper/PMC12941278/full.md

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Source: https://tomesphere.com/paper/PMC12941278