# Characterisation of a Missense Variant of the Alström Syndrome Centrosome and Basal Body Associated Protein (ALMS1) Gene Associated with Cardiomyopathy Using Induced Pluripotent Stem Cells

**Authors:** Tanushri Dargar, Alexandre Janin, Valérie Risson, Estèle Lafont, Camille Valla, Vincent Gache, Marie Abitbol

PMC · DOI: 10.3390/genes17020227 · Genes · 2026-02-11

## TL;DR

This study uses stem cells to investigate how a specific genetic variant in the ALMS1 gene affects heart cell development and function in a model of Alström syndrome.

## Contribution

The first hiPSC line based on a missense variant of ALMS1 is characterized, focusing on its impact on cardiomyocyte differentiation.

## Key findings

- The ALMS1:c.10004G>C variant reduces cardiomyocyte differentiation efficiency in hiPSCs.
- The variant does not affect contractile frequency or structural properties of formed cardiomyocytes.
- The study supports avoiding the use of the ALMS1:c.7384G>C variant in cat breeding until its pathogenicity is confirmed.

## Abstract

Background/Objectives: Human induced pluripotent stem cell (hiPSC) models provide a unique platform for testing the effect of genomic variants identified in patients with inherited diseases. In Alström syndrome, a rare multisystem disorder mainly caused by nonsense mutations in the ALMS1 gene, patients often present with infantile cardiomyopathy, retinal dystrophy, type 2 diabetes, and hearing loss in addition to obesity. These diverse clinical manifestations highlight the pleiotropic functions of ALMS1 in cellular processes such as ciliary signalling, cell cycle regulation, and tissue homeostasis. In cats, the ALMS1:c.7384G>C missense variant has been associated with cardiomyopathy in the absence of other symptoms of Alström syndrome, raising questions regarding the impact of this variant on cardiac pathology. Methods: To answer these questions, we generated an hiPSC line carrying the human ALMS1:c.10004G>C missense variant, homologous to the ALMS1:c.7384G>C feline variant, as well as an isogenic control, to investigate the impact of this variant on cardiomyocyte differentiation and function. Results: The introduction of the ALMS1:c.10004G>C variant in the homozygous state in hiPSCs resulted in a significant reduction in cardiomyocyte differentiation efficiency. However, the variant did not affect contractile frequency, sarcomere organisation, sarcomere length, or cardiomyocyte cell size. Together, these results suggest that while the ALMS1:c.10004G>C variant impairs cardiomyocyte differentiation, it does not disrupt the structural or functional properties of the hiPSC-derived cardiomyocytes that do form. Conclusions: We have generated and initiated the characterisation of the third ALMS1 mutant hiPSC line and the first line based on a missense variant, but further research is needed on its relevance in modelling ALMS1-related changes. Our results also support the previous recommendation not to use ALMS1:c.7384G>C for the selection of breeding cats until further data confirm its intrinsic pathogenicity.

## Linked entities

- **Genes:** ALMS1 (ALMS1 centrosome and basal body associated protein) [NCBI Gene 7840]
- **Diseases:** Alström syndrome (MONDO:0008763), cardiomyopathy (MONDO:0004994), retinal dystrophy (MONDO:0019118), type 2 diabetes (MONDO:0005148), hearing loss (MONDO:0005365)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** KLF4 (KLF transcription factor 4) [NCBI Gene 9314] {aka EZF, GKLF}, ALMS1 (ALMS1 centrosome and basal body associated protein) [NCBI Gene 7840] {aka ALSS}, HPRT1 (hypoxanthine phosphoribosyltransferase 1) [NCBI Gene 3251] {aka HGPRT, HPRT}, INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, PLSCR4 (phospholipid scramblase 4) [NCBI Gene 57088] {aka TRA1}, ACTN1 (actinin alpha 1) [NCBI Gene 87] {aka BDPLT15}, MRAP (melanocortin 2 receptor accessory protein) [NCBI Gene 56246] {aka B27, C21orf61, FALP, GCCD2, MRAP1}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, SOX2 (SRY-box transcription factor 2) [NCBI Gene 6657] {aka ANOP3, MCOPS3}, TNNT2 (troponin T2, cardiac type) [NCBI Gene 7139] {aka CMD1D, CMH2, CMPD2, LVNC6, RCM3, TnTC}, POU5F1 (POU class 5 homeobox 1) [NCBI Gene 5460] {aka OCT3, OCT4, OCT4Borf1, OTF-3, OTF3, OTF4}, MYL7 (myosin light chain 7) [NCBI Gene 58498] {aka MYL2A, MYLC2A}, ALB (albumin) [NCBI Gene 213] {aka FDAHT, HSA, PRO0883, PRO0903, PRO1341}, TTN (titin) [NCBI Gene 7273] {aka CMD1G, CMH9, CMPD4, CMYO5, CMYP5, EOMFC}, TBP (TATA-box binding protein) [NCBI Gene 6908] {aka GTF2D, GTF2D1, HDL4, SCA17, TBP1, TFIID}, MYL3 (myosin light chain 3) [NCBI Gene 4634] {aka CMH8, MLC-lV/sb, MLC1SB, MLC1V, VLC1, VLCl}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}
- **Diseases:** fibrosis (MESH:D005355), injury to (MESH:D014947), Alstrom Syndrome (MESH:D056769), hereditary disorders (MESH:D009386), inherited diseases (MESH:D030342), hearing loss (MESH:D034381), ciliopathy (MESH:D000072661), obesity (MESH:D009765), multisystem disorder (MESH:D019578), Cardiomyopathy (MESH:D009202), dilated cardiomyopathy (MESH:D002311), retinal dystrophy (MESH:D058499), mycoplasma (MESH:D009175), type 2 diabetes (MESH:D003924), cardiac, renal, and hepatic dysfunction (MESH:D006331), hypertrophic cardiomyopathy (MESH:D002312)
- **Chemicals:** nitrogen (MESH:D009584), Triton X-100 (MESH:D017830), doxycycline (MESH:D004318), isopropanol (MESH:D019840), ethanol (MESH:D000431), water (MESH:D014867), TRIzol (MESH:C411644), Y-27632 (MESH:C108830), GCDR (-), puromycin (MESH:D011691), calcium (MESH:D002118), 4',6-diamidino-2-phenylindole (MESH:C007293), SYBR  Green (MESH:C098022), CO2 (MESH:D002245), paraformaldehyde (MESH:C003043), sucrose (MESH:D013395), chloroform (MESH:D002725)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606], Felis catus (cat, species) [taxon 9685]
- **Mutations:** c.10003G>C, p.(G2462R), c.10004G>C, p.(S1301X), p.(G3335R), C for 24-48, c.6436C > T, c.7384G>C, C in 0, c.10004G>C, c.7384G>C
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), AG08 — Homo sapiens (Human), Melanoma, Cancer cell line (CVCL_C6NJ)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12940813/full.md

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12940813/full.md

## References

29 references — full list in the complete paper: https://tomesphere.com/paper/PMC12940813/full.md

---
Source: https://tomesphere.com/paper/PMC12940813