# Diagnostic Value of Karyotype, Microarray, RASopathy Gene Testing and Ultrasound in Fetuses with Nuchal Translucency 3.0–3.4 mm: A Single-Center Cohort Retrospective Study

**Authors:** Silvia Andrietti, Giuseppe Gullo, Diliana Beleva, Alessia Maccarrone, Lina De Paola, Chiara Roberta Gaggero, Chiara Calcagno, Maria Lucia Furnari, Pierangela De Biasio

PMC · DOI: 10.3390/genes17020234 · Genes · 2026-02-12

## TL;DR

This study shows that fetuses with a nuchal translucency of 3.0–3.4 mm have a high risk of genetic issues and birth defects, suggesting the need for detailed genetic and ultrasound testing.

## Contribution

The study demonstrates the added diagnostic value of advanced genetic testing and detailed ultrasound in fetuses with mildly increased nuchal translucency.

## Key findings

- Genetic abnormalities were detected in 28.9% of cases, with five rare anomalies identified only through advanced testing.
- Major structural malformations occurred in 17.5% of cases, with nearly 60% linked to genetic abnormalities.
- Advanced genetic testing provided an additional diagnostic yield of 3.1% in the cohort.

## Abstract

Background: Increased nuchal translucency (NT) is associated with an elevated risk of genetic abnormalities and structural malformations. The clinical utility of invasive testing and the optimal diagnostic approach in mildly increased NT (3.0–3.4 mm) is debated. This study aimed to evaluate genetic and ultrasound findings in this subgroup and to assess the diagnostic yield of advanced genetic testing. Methods: We retrospectively included a total of 107 fetuses with NT between 3.0 and 3.4 mm from a single fetal medicine unit. Complete outcome data were available for 97 pregnancies. Invasive prenatal testing with standard karyotype, chromosomal microarray analysis (CMA) and RASopathy panel testing were offered. All patients underwent detailed ultrasound examination to detect structural abnormalities at 16 and 20 weeks, regardless of whether invasive testing was performed. Results: Invasive prenatal testing, amniocentesis or chorionic villus sampling, (CVS), was performed in 77/97 cases (79.4%). Genetic abnormalities were detected in 28/97 (28.9%). Overall, five rare genetic anomalies were identified; none would have been detected by quantitative fluorescent polymerase chain reaction (QF-PCR) or non-invasive prenatal testing (NIPT). Two anomalies were detectable by standard karyotype, two exclusively by CMA and one exclusively by RASopathy panel. When considering all cases undergoing advanced genetic testing (CMA or RASopathy panel, n = 35) the overall diagnostic yield was 8.5% (3/35). When calculated across the entire cohort with complete follow-up, the additional diagnostic yield was 3.1% (3/97). Major structural malformations were identified in 17/97 cases (17.5%), of which 10 (58.8%) were associated with genetic abnormalities. Conclusions: Fetuses with NT measurements between 3.0 and 3.4 mm show a substantially increased risk of genetic abnormalities and structural malformations. These findings support a comprehensive prenatal evaluation, including invasive testing with advanced genetic analysis and detailed ultrasound assessment, to optimize diagnosis and counseling.

## Full-text entities

- **Genes:** KRAS (KRAS proto-oncogene, GTPase) [NCBI Gene 3845] {aka 'C-K-RAS, C-K-RAS, CFC2, K-RAS2A, K-RAS2B, K-RAS4A}, CBL (Cbl proto-oncogene) [NCBI Gene 867] {aka C-CBL, CBL2, FRA11B, NSLL, RNF55}, CGB5 (chorionic gonadotropin subunit beta 5) [NCBI Gene 93659] {aka CGB, HCG}, ERF (ETS2 repressor factor) [NCBI Gene 2077] {aka CHYTS, CRS4, PE-2, PE2}, MRAS (muscle RAS oncogene homolog) [NCBI Gene 22808] {aka M-RAs, NS11, R-RAS3, RRAS3}, SHOC2 (SHOC2 leucine rich repeat scaffold protein) [NCBI Gene 8036] {aka NSLH1, SIAA0862, SOC2, SUR8}, RRAS (RAS related) [NCBI Gene 6237] {aka R-Ras, RRAS1}, PTPN11 (protein tyrosine phosphatase non-receptor type 11) [NCBI Gene 5781] {aka BPTP3, CFC, JMML, METCDS, NS1, PTP-1D}, RAF1 (Raf-1 proto-oncogene, serine/threonine kinase) [NCBI Gene 5894] {aka CMD1NN, CRAF, NS5, Raf-1, c-Raf}, SOS1 (SOS Ras/Rac guanine nucleotide exchange factor 1) [NCBI Gene 6654] {aka GF1, GGF1, GINGF, HGF, NS4, SOS-1}, LZTR1 (leucine zipper like post translational regulator 1) [NCBI Gene 8216] {aka BTBD29, LZTR-1, NS10, NS2, SWNTS2}, PAPPA (pappalysin 1) [NCBI Gene 5069] {aka ASBABP2, DIPLA1, IGFBP-4ase, PAPA, PAPP-A, PAPPA1}, SPRED2 (sprouty related EVH1 domain containing 2) [NCBI Gene 200734] {aka NS14, Spred-2}, SOS2 (SOS Ras/Rho guanine nucleotide exchange factor 2) [NCBI Gene 6655] {aka NS9, SOS-2}, MAP2K1 (mitogen-activated protein kinase kinase 1) [NCBI Gene 5604] {aka CFC3, MAPKK1, MEK1, MEL, MKK1, PRKMK1}, RIT1 (Ras like without CAAX 1) [NCBI Gene 6016] {aka NS8, RIBB, RIT, ROC1}, MAP2K2 (mitogen-activated protein kinase kinase 2) [NCBI Gene 5605] {aka CFC4, MAPKK2, MEK2, MKK2, PRKMK2}, BRAF (B-Raf proto-oncogene, serine/threonine kinase) [NCBI Gene 673] {aka B-RAF1, B-raf, BRAF-1, BRAF1, NS7, RAFB1}, HRAS (HRas proto-oncogene, GTPase) [NCBI Gene 3265] {aka C-BAS/HAS, C-H-RAS, C-HA-RAS1, CTLO, H-RASIDX, HAMSV}, PPP1CB (protein phosphatase 1 catalytic subunit beta) [NCBI Gene 5500] {aka HEL-S-80p, MP, NSLH2, PP-1B, PP1B, PP1Cbeta}, NRAS (NRAS proto-oncogene, GTPase) [NCBI Gene 4893] {aka ALPS4, CMNS, N-ras, NCMS, NRAS1, NS6}, RRAS2 (RAS related 2) [NCBI Gene 22800] {aka NS12, TC21}, CHD7 (chromodomain helicase DNA binding protein 7) [NCBI Gene 55636] {aka CRG, HH5, IS3, KAL5}
- **Diseases:** genomic abnormalities (MESH:D042822), cardiovascular dysregulation (MESH:D002318), neurodevelopmental delays (MESH:D006968), genetic anomalies (MESH:D020022), antiphospholipid syndrome (MESH:D016736), congenital heart defects (MESH:D006330), chronic hypertension (MESH:D006973), transposition of the great arteries (MESH:D014188), malformations (MESH:C564254), TOP (MESH:D011254), CMA (MESH:D025063), aneuploidies (MESH:D000782), Noonan syndrome (MESH:D009634), NT (MESH:D053589), VUS (MESH:D065309), miscarriage (MESH:D000022), trisomy 18 and 22 (MESH:C536799), complete atrioventricular canal (MESH:C535974), VSD (MESH:D004310), Cardiac anomalies (MESH:D006331), T21 (MESH:D004314), T18 (MESH:D000073842), Chromosomal abnormalities (MESH:D002869), trisomies (MESH:D014314), anxiety (MESH:D001007), UPD (MESH:D024182), injury to (MESH:D014947), AVSD (MESH:C562831), Costello syndrome (MESH:D056685), congenital defects (MESH:D000013), intrauterine growth restriction (MESH:D005317), cardiofaciocutaneous syndrome (MESH:C535579), congenital malformations (OMIM:163000), TOF (MESH:D013771), Genetic abnormalities (MESH:D030342), single- (MESH:D012640), ventricular septal defect (MESH:D006345), Monogenic Disorders (MESH:D009358), APS (MESH:D016884), structural abnormalities (MESH:C566527), Structural malformations (MESH:D020914), genetic and structural anomalies (MESH:C536503), T13 (MESH:D000073839), Fetal congenital defects (MESH:D005315), left congenital diaphragmatic hernia (MESH:D065630)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.7145dup

## Full text

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## Figures

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## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC12940776/full.md

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Source: https://tomesphere.com/paper/PMC12940776