# Let-7a and miR-34a Interplay Potent Suppressive Roles in Hepatocellular Carcinoma via Co-Targeting FNDC3B, IGF2 and SOX4

**Authors:** Bangly Soliman, Ahmed Fawzy Ibrahim, Ahmed Salem, Mohamed Ghazy, Mahmoud T. Abo-Elfadl, Mahmoud ElHefnawi, Mario Flores

PMC · DOI: 10.3390/ijms27041714 · International Journal of Molecular Sciences · 2026-02-10

## TL;DR

This study explores how let-7a and miR-34a work together to suppress liver cancer by targeting specific genes, showing their combined use could improve cancer treatment.

## Contribution

This is the first study to experimentally validate the combined regulation of FNDC3B, IGF2, and SOX4 by let-7a and miR-34a in hepatocellular carcinoma.

## Key findings

- Let-7a and miR-34a co-target FNDC3B, IGF2, and SOX4, which are involved in liver cancer progression.
- MiR-34a showed a stronger suppression effect, reducing tumor cell proliferation by 38.7%.
- SOX4 was the most significantly downregulated target at both gene and protein levels.

## Abstract

Both let-7a and miR-34a have been repeatedly studied as pivotal suppressors for Hepatocellular carcinoma; however, their combined regulations remain to be fully elucidated. In the present study, we performed a comprehensive in silico analysis for let-7a and miR-34a using a wealth of updated tools: miRWalk, Genetrail and miRnet. In addition, our study is the first to quantify both miRs and their three predicted yet not experimentally validated oncogenic targets: FNDC3B, IGF2 and SOX4. This was assessed in HepG2 cell model following treatment by PEGP-vector expressing the miRs by MTT assay, florescence microscopy, qPCR and immune-florescence. Our bioinformatics analysis revealed a pool of common predicted hepatocarcinogenic targets shared by both let-7a and miR-34a. Importantly, three targets were identified as co-regulated through multiple canonical binding sites for each miR, and these had not been experimentally validated before. Furthermore, functional enrichment of these putative targets demonstrated their significant involvement in major and emerging HCC hallmarks, such as reprogramming of energy metabolism and evading immune destruction. These findings support our concept of simultaneous co-regulation of these oncogenes through the signaling networks and GO terms associated with both miRs. Consistently, our experimental results verified the significant overexpression of both miRs in HepG2 cells, leading to reduced tumor cell proliferation and decreased levels of the three oncogenic transcripts. Interestingly, miR-34a exhibited a superior suppression effect, reaching 38.7%, and SOX4 was identified as the most significantly downregulated target at both transcriptional and translational levels. Our findings provide new insights into the interconnected anti-HCC effects of let-7a and miR-34a and highlight the potential of applying their combined use to achieve the best therapeutic outcomes for this invasive tumor.

## Linked entities

- **Genes:** FNDC3B (fibronectin type III domain containing 3B) [NCBI Gene 64778], IGF2 (insulin like growth factor 2) [NCBI Gene 3481], SOX4 (SRY-box transcription factor 4) [NCBI Gene 6659]
- **Diseases:** Hepatocellular carcinoma (MONDO:0007256)

## Full-text entities

- **Genes:** PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 10891] {aka LEM6, PGC-1(alpha), PGC-1alpha, PGC-1v, PGC1, PGC1A}, IGF2 (insulin like growth factor 2) [NCBI Gene 3481] {aka C11orf43, GRDF, IGF-II, PP9974, SRS3}, SIRT1 (sirtuin 1) [NCBI Gene 23411] {aka SIR2, SIR2L1, SIR2alpha}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, RNU6-6P (RNA, U6 small nuclear 6, pseudogene) [NCBI Gene 26826] {aka RNU6-6, RNU6B, U6-6}, HK1 (hexokinase 1) [NCBI Gene 3098] {aka CNSHA5, HK, HK1-ta, HK1-tb, HK1-tc, HKD}, LDHA (lactate dehydrogenase A) [NCBI Gene 3939] {aka GSD11, HEL-S-133P, LDHM, PIG19}, RB1 (RB transcriptional corepressor 1) [NCBI Gene 5925] {aka OSRC, PPP1R130, RB, p105-Rb, p110-RB1, pRb}, STAT3 (signal transducer and activator of transcription 3) [NCBI Gene 6774] {aka ADMIO, ADMIO1, APRF, HIES}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, SOX4 (SRY-box transcription factor 4) [NCBI Gene 6659] {aka CSS10, EVI16, IDDSDF}, INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, IL5 (interleukin 5) [NCBI Gene 3567] {aka EDF, IL-5, TRF}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, HK2 (hexokinase 2) [NCBI Gene 3099] {aka HKII, HXK2}, FNDC3B (fibronectin type III domain containing 3B) [NCBI Gene 64778] {aka FAD104, PRO4979, YVTM2421}, GPI (glucose-6-phosphate isomerase) [NCBI Gene 2821] {aka AMF, CNSHA4, GNPI, NLK, PGI, PHI}, MYLIP (myosin regulatory light chain interacting protein) [NCBI Gene 29116] {aka IDOL, MIR}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, MIR335 (microRNA 335) [NCBI Gene 442904] {aka MIRN335, hsa-mir-335, miRNA335, mir-335}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, MAP3K4 (mitogen-activated protein kinase kinase kinase 4) [NCBI Gene 4216] {aka MAPKKK4, MEKK 4, MEKK4, MTK1, PRO0412}, MIR34A (microRNA 34a) [NCBI Gene 407040] {aka MIRN34A, miRNA34A, mir-34, mir-34a}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}
- **Diseases:** hepatocellular oncogenesis (MESH:D063646), oncogenes (MESH:D000074723), inflammation (MESH:D007249), injury to (MESH:D014947), Cancer (MESH:D009369), breast cancer metastasis (MESH:D001943), HCC (MESH:D006528), tumorigenic (MESH:D002471), metastasis (MESH:D009362)
- **Chemicals:** Glycogen (MESH:D006003), L (MESH:D007930), PEGP (MESH:C103390), iso-propanol (MESH:D019840), formazan (MESH:D005562), Streptomycin (MESH:D013307), lactate (MESH:D019344), Paraformaldehyde (MESH:C003043), agarose (MESH:D012685), ATP (MESH:D000255), CO2 (MESH:D002245), DAPI (MESH:C007293), glucose (MESH:D005947), H (MESH:D006859), glycerol (MESH:D005990), penicillin (MESH:D010406), Biazol (-), carbohydrate (MESH:D002241), fatty acid (MESH:D005227), Alexa fluor488 (MESH:C000711379), Fluorescein (MESH:D019793), BFP (MESH:C041630), MTT (MESH:C070243), Hoechst 33342 (MESH:C017807)
- **Species:** Escherichia coli (E. coli, species) [taxon 562], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** pUC57 — Mus musculus (Mouse), Hybridoma (CVCL_A9KB), HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), DH5 alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12940684/full.md

## Figures

13 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12940684/full.md

## References

105 references — full list in the complete paper: https://tomesphere.com/paper/PMC12940684/full.md

---
Source: https://tomesphere.com/paper/PMC12940684