# In Vitro Anticancer Activity and In Silico Target Profiling of 5-(Piperazin-1-ylsulfonyl)-1,3-oxazole-4-carbonitriles

**Authors:** Oleksandr O. Severin, Denys Bondar, Olga Bragina, Nandish M. Nagappa, Janari Olev, Volodymyr S. Brovarets, Ivan V. Semenyuta, Yevgen Karpichev

PMC · DOI: 10.3390/ijms27041936 · International Journal of Molecular Sciences · 2026-02-18

## TL;DR

This study identifies new oxazole-based compounds with strong anticancer activity and good selectivity, particularly in neuroblastoma cells.

## Contribution

The discovery of 5-(piperazin-1-ylsulfonyl)-1,3-oxazole-4-carbonitriles as selective anticancer agents with potential kinase-targeting mechanisms.

## Key findings

- Compound 7b showed high activity in neuroblastoma cells with low toxicity to non-cancerous cells.
- Molecular docking predicted strong interactions with Aurora A kinase and cyclin-dependent kinases.
- ADMET properties of lead compounds were favorable compared to doxorubicin, though biodegradability was limited.

## Abstract

Sulfonylated 5-piperazine-substituted 1,3-oxazole-4-carbonitriles were synthesized and evaluated for in vitro anticancer activity. Cytotoxicity was assessed in hepatocellular (HepG2, Huh7), breast (MCF-7, MDA-MB-231), cervical (HeLa), melanoma (M21), and neuroblastoma (Kelly, SH-SY5Y) cell lines, with HEK293 cells used as a non-malignant control. Compounds 7a, 7b, and 8aa emerged as lead structures. Notably, compound 7b showed the highest activity in Kelly neuroblastoma cells (IC50 = 1.3 µM) while exhibiting low cytotoxicity toward HEK293 cells (IC50 > 10 µM), indicating an improved selectivity profile relative to doxorubicin. In silico molecular docking suggested favorable interactions of the lead compounds with several cancer-associated proteins, with the highest predicted affinity observed for Aurora A kinase, along with additional predicted interactions with cyclin-dependent kinases. Predicted ADMET properties of compounds 7a, 7b, and 8aa compared favorably with doxorubicin, although the lead compounds were not readily biodegradable under OECD 301D conditions. Overall, these findings identify oxazole-4-carbonitriles as promising anticancer candidates with a putative kinase-directed mechanism of action.

## Linked entities

- **Chemicals:** doxorubicin (PubChem CID 31703)
- **Diseases:** hepatocellular carcinoma (MONDO:0007256), breast cancer (MONDO:0004989), cervical cancer (MONDO:0002974), melanoma (MONDO:0005105), neuroblastoma (MONDO:0005072)

## Full-text entities

- **Genes:** FLT3 (fms related receptor tyrosine kinase 3) [NCBI Gene 2322] {aka CD135, FLK-2, FLK2, STK1}, CHEK2 (checkpoint kinase 2) [NCBI Gene 11200] {aka CDS1, CHK2, HuCds1, LFS2, PP1425, RAD53}, CDK4 (cyclin dependent kinase 4) [NCBI Gene 1019] {aka CMM3, MCPH31, PSK-J3}, FBXW7 (F-box and WD repeat domain containing 7) [NCBI Gene 55294] {aka AGO, CDC4, DEDHIL, FBW6, FBW7, FBX30}, KITLG (KIT ligand) [NCBI Gene 4254] {aka DCUA, DFNA69, FPH2, FPHH, KL-1, Kitl}, AURKA (aurora kinase A) [NCBI Gene 6790] {aka AIK, ARK1, AURA, BTAK, PPP1R47, STK15}, CDK6 (cyclin dependent kinase 6) [NCBI Gene 1021] {aka MCPH12, PLSTIRE}, AURKB (aurora kinase B) [NCBI Gene 9212] {aka AIK2, AIM-1, AIM1, ARK-2, ARK2, AurB}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, FLT4 (fms related receptor tyrosine kinase 4) [NCBI Gene 2324] {aka CHTD7, FLT-4, FLT41, LMPH1A, LMPHM1, PCL}, MUL1 (mitochondrial E3 ubiquitin protein ligase 1) [NCBI Gene 79594] {aka C1orf166, GIDE, MAPL, MULAN, RNF218}, MMP2 (matrix metallopeptidase 2) [NCBI Gene 4313] {aka CLG4, CLG4A, MMP-2, MMP-II, MONA, TBE-1}, MYCN (MYCN proto-oncogene, bHLH transcription factor) [NCBI Gene 4613] {aka FGLDS1, MODED, MPAPA, MYCNsORF, MYCNsPEP, N-myc}, CDK2 (cyclin dependent kinase 2) [NCBI Gene 1017] {aka CDKN2, p33(CDK2)}, KIT (KIT proto-oncogene, receptor tyrosine kinase) [NCBI Gene 3815] {aka C-Kit, CD117, MASTC, PBT, SCFR}, AURKC (aurora kinase C) [NCBI Gene 6795] {aka AIE2, AIK3, ARK3, AurC, HEL-S-90, SPGF5}, Abcb1b (ATP-binding cassette, sub-family B member 1B) [NCBI Gene 24646] {aka Abcb1, Mdr1, Pgy1, Pgy2, mdr1b}, CDK7 (cyclin dependent kinase 7) [NCBI Gene 1022] {aka CAK, CAK1, CDKN7, HCAK, MO15, STK1}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, KDR (kinase insert domain receptor) [NCBI Gene 3791] {aka CD309, FLK1, VEGFR, VEGFR2}, PARP1 (poly(ADP-ribose) polymerase 1) [NCBI Gene 142] {aka ADPRT, ADPRT 1, ADPRT1, ARTD1, PARP, PARP-1}, CHEK1 (checkpoint kinase 1) [NCBI Gene 1111] {aka CHK1, OZEMA21}, PARP2 (poly(ADP-ribose) polymerase 2) [NCBI Gene 10038] {aka ADPRT2, ADPRTL2, ADPRTL3, ARTD2, PARP-2, pADPRT-2}, MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318] {aka CLG4B, GELB, MANDP2, MMP-9}, MYCL (MYCL proto-oncogene, bHLH transcription factor) [NCBI Gene 4610] {aka L-Myc, LMYC, MYCL1, bHLHe38}, ALK (ALK receptor tyrosine kinase) [NCBI Gene 238] {aka ALK1, CD246, NBLST3}, CDK9 (cyclin dependent kinase 9) [NCBI Gene 1025] {aka C-2k, CDC2L4, CTK1, PITALRE, TAK}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}
- **Diseases:** hepatocellular carcinoma (MESH:D006528), Neuroblastoma (MESH:D009447), glioblastoma (MESH:D005909), non-small-cell lung cancer (MESH:D002289), breast adenocarcinoma (MESH:D001943), triple-negative breast cancer (MESH:D064726), CNS cancer (MESH:D009369), Cytotoxic (MESH:D064420), injury to (MESH:D014947), Melanoma (MESH:D008545), metastasis (MESH:D009362), death (MESH:D003643), cervical cancer (MESH:D002583)
- **Chemicals:** sodium acetate (MESH:D019346), KBr (MESH:C039004), PBS (MESH:D007854), acetic acid (MESH:D019342), hydrogen (MESH:D006859), HCl (MESH:D006851), EtOH (MESH:D000431), 13C (MESH:C000615229), Crizotinib (MESH:D000077547), benzyl chloride (MESH:C021292), Navitoclax (MESH:C528561), tetrazolium salt (MESH:D013778), amide (MESH:D000577), sulfonyl chloride (MESH:C044255), ENMD-2076 (MESH:C551397), CCT137690 (MESH:C551619), ATP (MESH:D000255), water (MESH:D014867), CO2 (MESH:D002245), 1-phenylpiperazine (MESH:C031503), Tozasertib (MESH:C484810), 1,3-Oxazoles (MESH:D010080), DMF (MESH:D004126), THF (MESH:C018674), Olaparib (MESH:C531550), piperazine (MESH:D000077489), mineral (MESH:D008903), sulfonamides (MESH:D013449), isoxazole (MESH:D007555), nitrogen (MESH:D009584), triethylamine (MESH:C016162), Alisertib (MESH:C550258), adenosine diphosphate (MESH:D000244), carbon (MESH:D002244), streptomycin (MESH:D013307), Palbociclib (MESH:C500026), SNS-032 (MESH:C484864), 2-aryl-4-cyano-1,3-oxazole-5-sulfonyl chlorides (-), d (MESH:D003903), metal (MESH:D008670), 1,4-dioxane (MESH:C025223), Prexasertib (MESH:C000608121), Tivozanib (MESH:C553176), silica gel (MESH:D058428), methanol (MESH:D000432), furan (MESH:C039281), 7a (MESH:C040548), DOX (MESH:D004317), pyridine (MESH:C023666), Pi (MESH:D010716), oxygen (MESH:D010100), penicillin (MESH:D010406), PTFE (MESH:D011138), formazan (MESH:D005562)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** G6540A
- **Cell lines:** MCF-7 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_0031), HeLA — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), SF-539 — Homo sapiens (Human), Gliosarcoma, Cancer cell line (CVCL_1691), SH-SY5Y — Homo sapiens (Human), Neuroblastoma, Cancer cell line (CVCL_0019), Kelly — Homo sapiens (Human), Neuroblastoma, Cancer cell line (CVCL_2092), Huh7 — Homo sapiens (Human), Adult hepatocellular carcinoma, Cancer cell line (CVCL_0336), SF-268 — Homo sapiens (Human), Astrocytoma, Cancer cell line (CVCL_1689), HEK — Homo sapiens (Human), Transformed cell line (CVCL_0045), MDA-MB-231 — Homo sapiens (Human), Breast adenocarcinoma, Cancer cell line (CVCL_0062), HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), M21 — Homo sapiens (Human), Melanoma, Cancer cell line (CVCL_D031)

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## Figures

16 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12940612/full.md

## References

59 references — full list in the complete paper: https://tomesphere.com/paper/PMC12940612/full.md

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Source: https://tomesphere.com/paper/PMC12940612