# An Integrated Analysis of circRNA and lncRNA Expression of Bovine Granulosa Cells Induced by Melatonin Reveals the Pathways Potentially Involved in Follicular Development

**Authors:** Shujuan Wang, Shiji Zhu, Yukang Wu, Yuhao Zhang, Dengxu Zhu, Huiyu Wang, Wenju Liu

PMC · DOI: 10.3390/genes17020178 · Genes · 2026-01-31

## TL;DR

This study explores how melatonin affects bovine granulosa cells by analyzing changes in lncRNA and circRNA expression, revealing pathways involved in follicular development.

## Contribution

The study identifies novel lncRNAs and circRNAs regulated by melatonin and their potential roles in granulosa cell function and follicular development.

## Key findings

- Melatonin treatment altered the expression of 99 lncRNAs and 28 circRNAs in bovine granulosa cells.
- Differentially expressed RNAs were enriched in pathways related to development, apoptosis, and reproductive functions.
- An lncRNA/circRNA and miRNA regulatory network was constructed to explore their interactions in follicular development.

## Abstract

Objective: Accumulating evidence demonstrates that melatonin is involved in modulating granulosa cell function and follicular development. lncRNAs (long non-coding RNAs) and circRNAs (circular RNAs) have been reported to participate in multiple biological processes. This study aimed to explore the candidate circRNAs and lncRNAs related to molecular mechanisms when exploring the role of melatonin in regulating ovarian function. Methods: Bovine ovary granulosa cells were collected 48 h after treatment with melatonin at 10−7 M. The lncRNA and circRNA profiles of bovine granulosa cells were further explored using high-throughput sequencing in the absence/presence of melatonin. The differentially expressed lncRNAs and circRNAs were analyzed through the annotation information of source transcripts for GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes). Results: We identified 99 differentially expressed lncRNAs and 28 differentially expressed circRNAs. Enrichment analysis of differentially expressed lncRNAs and circRNAs showed they were enriched in multiple pathways involved in development, apoptosis, and reproductive function, such as the mTOR (mammalian Target of Rapamycin) signaling pathway, FoxO (Forkhead box O) signaling pathway, MAPK (Mitogen-Activated Protein Kinase) signaling pathway, Hippo signaling pathway, TGF-beta (Transforming Growth Factor-β) signaling pathway, PI3K-Akt (Phosphatidylinositol 3-Kinase-Akt) signaling pathway, apoptosis, and Rap1 (Ras-related protein 1), most of which were mainly related to granulosa cell function and the crosstalk between granulosa cells and oocytes. The present analysis indicated the potential role of melatonin in granulosa cell function by regulating lncRNA and circRNA expression and, thus, mediating follicular development. An lncRNA/circRNA and miRNA regulatory network was also constructed to take their interactions into account. Conclusions: Our study offers details of lncRNA and circRNA expression in bovine granulosa cells and further provides insight into the potential role of melatonin in regulating reproduction by modulating lncRNA and circRNA expression.

## Linked entities

- **Proteins:** MTOR (mechanistic target of rapamycin kinase), foxo (forkhead box, sub-group O), MAPK (mitogen activated kinase-like protein), hpo (hippo), TGFB1 (transforming growth factor beta 1), RAP1A (RAP1A, member of RAS oncogene family)
- **Chemicals:** melatonin (PubChem CID 896)
- **Species:** Bos taurus (taxon 9913)

## Full-text entities

- **Genes:** CCN2 (cellular communication network factor 2) [NCBI Gene 281103] {aka CTGF}, FUNDC1 (FUN14 domain containing 1) [NCBI Gene 518258], PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 517948] {aka PI3K, PI3Kbeta}, PLEK (pleckstrin) [NCBI Gene 518658], ACTBP (actin beta pseudogene) [NCBI Gene 281594], ELAVL1 (ELAV like RNA binding protein 1) [NCBI Gene 617316] {aka HuR}, MIR204 (microRNA mir-204) [NCBI Gene 100170924] {aka MIRN204, bta-mir-204}, TP53 (tumor protein p53) [NCBI Gene 281542], AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 280991] {aka AKT}, CYM (chymosin) [NCBI Gene 529879] {aka CPC, Chy}, INHBA (inhibin subunit beta A) [NCBI Gene 281867], BMP6 (bone morphogenetic protein 6) [NCBI Gene 617566], MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 100139219], SLC7A11 (solute carrier family 7 member 11) [NCBI Gene 524078], CTNNB1 (catenin beta 1) [NCBI Gene 539003], MT2A (metallothionein 2A) [NCBI Gene 404070] {aka MT-2, MT-II, MT2}, PABPN1 (poly(A) binding protein nuclear 1) [NCBI Gene 282298], ESR1 (estrogen receptor 1) [NCBI Gene 407238], INS (insulin) [NCBI Gene 280829], MIR214 (microRNA mir-214) [NCBI Gene 791039] {aka MIRN214, bta-mir-214}, MTNR1A (melatonin receptor 1A) [NCBI Gene 539948] {aka MT1, Mel-1A-R}, TOX3 (TOX high mobility group box family member 3) [NCBI Gene 539135]
- **Diseases:** gastric cancer (MESH:D013274), KB (OMIM:300845), non-small-cell lung cancer (MESH:D002289), prostate cancer (MESH:D011471), injury to (MESH:D014947), osteosarcoma (MESH:D012516), inflammation (MESH:D007249), female infertility (MESH:D007247), cancer (MESH:D009369), breast cancer (MESH:D001943), triple-negative breast cancer (MESH:D064726), ovarian cancer (MESH:D010051), metastasis (MESH:D009362), colorectal cancer (MESH:D015179)
- **Chemicals:** water (MESH:D014867), progesterone (MESH:D011374), NaCl (MESH:D012965), EDTA (MESH:D004492), nitrogen (MESH:D009584), estradiol (MESH:D004958), streptomycin (MESH:D013307), CO2 (MESH:D002245), steroid (MESH:D013256), SYBR Green I (MESH:C098022), alcohol (MESH:D000438), DMSO (MESH:D004121), Melatonin (MESH:D008550), DMEM (-), penicillin (MESH:D010406), plasmocin (MESH:C554844)
- **Species:** Ovis aries (domestic sheep, species) [taxon 9940], Sus scrofa (pig, species) [taxon 9823], Bos taurus (bovine, species) [taxon 9913], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** Granulosa — Bos taurus (Bovine), Spontaneously immortalized cell line (CVCL_6572)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12940610/full.md

## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12940610/full.md

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Source: https://tomesphere.com/paper/PMC12940610