# Breast-Cancer-Derived Secretomes from MCF-7 Cells Modulate Bacterial Pathogenic Traits

**Authors:** Suha M. Mahmood, Huda K. Al-Nasrallah, Alanoud Aldossry, Mysoon M. Al-Ansari, Monther Al-Alwan

PMC · DOI: 10.3390/ijms27042073 · 2026-02-23

## TL;DR

This study shows how breast cancer cells can change the behavior of bacteria in the tumor environment, potentially affecting disease progression.

## Contribution

The study reveals species-specific bacterial reprogramming by breast cancer-derived secretomes, offering new insights into tumor-microbiome interactions.

## Key findings

- MCF-7 conditioned media caused structural changes in Pseudomonas aeruginosa and Enterococcus faecalis.
- E. coli showed increased biofilm formation and altered antibiotic susceptibility in response to MCF-7 CM.
- MCF-7 CM enriched virulence genes in bacteria, suggesting enhanced pathogenic potential.

## Abstract

Breast cancer is the most frequently diagnosed malignancy among women worldwide, with the luminal A subtype being the most prevalent. Several studies have reported a complex interplay between breast cancer cells and the local microbiome; however, the mechanisms by which tumor cell-secreted factors influence bacterial biological properties remain insufficiently explored. In this study, we established an in vitro model that partially recapitulates the luminal A breast cancer microenvironment by exposing three breast-associated bacterial species, Pseudomonas aeruginosa, Enterococcus faecalis, and Escherichia coli, to conditioned media (CM) derived from MCF-7 (tumor) or MCF-10A (non-tumor control) cell lines. A combination of complementary approaches, including ultrastructural morphological assessment, biofilm formation assays, antimicrobial susceptibility testing, and virulence gene abundance profiling by genomic qPCR, was employed to reveal distinct tumor-microbiota interactions. Exposure to MCF-7 CM induced dose-dependent structural alterations in P. aeruginosa and E. faecalis, with pronounced membrane blebbing and structural disruption in E. faecalis. Biofilm formation was differentially modulated in a species- and concentration-dependent manner, with a persistent increase observed in E. coli. Antibiotic susceptibility profiles were selectively altered in E. faecalis, which displayed increased sensitivity to vancomycin, penicillin, and imipenem, along with decreased sensitivity to chloramphenicol. P. aeruginosa exhibited increased sensitivity to imipenem along with reduced sensitivity to meropenem and gentamicin, whereas no significant changes were observed in E. coli. qPCR analyses demonstrated that MCF-7 CM was associated with enrichment of multiple virulence-associated genes (e.g., lasB, exoS, pilB, plcH, fsrC, esp, fimH, and papG), reflecting enhanced pathogenic and adhesive potential. Collectively, these findings suggest that luminal A breast cancer-derived factors can reprogram microbial phenotypes in a species-specific manner, providing mechanistic insight into breast tumor-microbiome crosstalk and a platform to explore microbiome-targeted interventions.

## Linked entities

- **Genes:** lasB (elastase LasB) [NCBI Gene 880368], exoS (exoenzyme S) [NCBI Gene 879837], MSRB2 (methionine sulfoxide reductase B2) [NCBI Gene 22921], plcH (hemolytic phospholipase C) [NCBI Gene 879296], fsrC (sensor histidine kinase FsrC) [NCBI Gene 60894107], PTPRVP (protein tyrosine phosphatase receptor type V, pseudogene) [NCBI Gene 148713], fimH (minor component of type 1 fimbriae) [NCBI Gene 913676], atpC (ATP synthase F1 complex subunit epsilon) [NCBI Gene 948245]
- **Chemicals:** vancomycin (PubChem CID 14969), penicillin (PubChem CID 2349), imipenem (PubChem CID 104838), chloramphenicol (PubChem CID 5959), meropenem (PubChem CID 441130), gentamicin (PubChem CID 3467)
- **Diseases:** breast cancer (MONDO:0004989)
- **Species:** Pseudomonas aeruginosa (taxon 287), Enterococcus faecalis (taxon 1351), Escherichia coli (taxon 562)

## Full-text entities

- **Genes:** INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, asa1 [NCBI Gene 9988313], PTPRVP (protein tyrosine phosphatase receptor type V, pseudogene) [NCBI Gene 148713] {aka ESP, OST-PTP, PTPRV}, MSRB2 (methionine sulfoxide reductase B2) [NCBI Gene 22921] {aka CBS-1, CBS1, CGI-131, MSRB, PILB}, EGF (epidermal growth factor) [NCBI Gene 1950] {aka HOMG4, URG}, AP2B1 (adaptor related protein complex 2 subunit beta 1) [NCBI Gene 163] {aka ADTB2, AP105B, AP2-BETA, CLAPB1}
- **Diseases:** infection (MESH:D007239), Cancer (MESH:D009369), cytotoxicity (MESH:D064420), inflammation (MESH:D007249), luminal A disease (MESH:D004194), injury to (MESH:D014947), tumorigenic (MESH:D002471), Breast Cancer (MESH:D001943), endocarditis (MESH:D004696), phospholipase-mediated cytotoxicity (MESH:C567355), carcinogenesis (MESH:D063646)
- **Chemicals:** F12 (MESH:C007782), hydrocortisone (MESH:D006854), Agar (MESH:D000362), CFM-7 (-), gold (MESH:D006046), mannose (MESH:D008358), crystal violet (MESH:D005840), penicillin (MESH:D010406), glycerol (MESH:D005990), alginate (MESH:D000464), glutaraldehyde (MESH:D005976), gentamicin (MESH:D005839), chloramphenicol (MESH:D002701), ethanol (MESH:D000431), phospholipid (MESH:D010743), imipenem (MESH:D015378), L-glutamine (MESH:D005973), CO2 (MESH:D002245), vancomycin (MESH:D014640), meropenem (MESH:D000077731)
- **Species:** Prevotella (genus) [taxon 838], Pseudomonas aeruginosa (species) [taxon 287], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Homo sapiens (human, species) [taxon 9606], Lactobacillus (genus) [taxon 1578], Streptococcus (genus) [taxon 1301], Escherichia coli (E. coli, species) [taxon 562], Methylobacterium (genus) [taxon 407], gut metagenome (species) [taxon 749906], Enterococcus faecalis (species) [taxon 1351], Sphingobium yanoikuyae (species) [taxon 13690], Mycoplasma (genus) [taxon 2093]
- **Cell lines:** MDA-MB-231 triple-negative breast cancer — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_B5N7), MDA-MB-231 — Homo sapiens (Human), Breast adenocarcinoma, Cancer cell line (CVCL_0062), CM-10A — Homo sapiens (Human), Spontaneously immortalized cell line (CVCL_0598), MCF-7 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_0031), CFM-10A — Homo sapiens (Human), Breast carcinoma, Cancer cell line (CVCL_VQ66), CM-7 — Felis catus (Cat), Finite cell line (CVCL_VZ64)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12940185/full.md

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Source: https://tomesphere.com/paper/PMC12940185