# Genotype-Phenotype Delineation of Autoimmune Polyendocrinopathy, Candidiasis, and Ectodermal Dystrophy in a Pediatric Patient: A Case Report

**Authors:** Rima Hanna-Wakim, Pascale E. Karam, Mazen Kurban, Nadine Yazbeck

PMC · DOI: 10.3390/genes17020160 · 2026-01-29

## TL;DR

This case report describes a rare genetic disorder in a child from Lebanon, involving immune system dysfunction and multiple symptoms.

## Contribution

The study identifies a novel AIRE gene mutation and expands the known phenotypic spectrum of this rare disorder.

## Key findings

- Exome sequencing confirmed a novel homozygous pathogenic variant in the AIRE gene.
- The patient exhibited chronic mucocutaneous candidiasis, enamel hypoplasia, and hepatitis.
- The findings expand the genotypic and phenotypic understanding of this rare immune disorder.

## Abstract

Background/Objectives: Autoimmune Polyendocrinopathy with Candidiasis and Ectodermal Dystrophy is an extremely rare autosomal recessive disorder caused by inborn errors of immunity. It is due to a loss-of-function mutation in the AIRE autoimmune regulator gene. Its manifestations include autoimmunity affecting endocrine glands, in addition to non-endocrine manifestations including dental enamel hypoplasia, alopecia areata, hepatitis, and chronic mucocutaneous candidiasis. Globally, 10 cases per million are affected by this condition, with higher incidence in highly consanguineous populations. Here, we describe a novel AIRE gene mutation in a pediatric patient from Lebanon, along with the observed phenotype. Method: A nine-year-old boy with history of craniosynostosis presented with jaundice. His past medical history was significant for recurrent oral thrush, keratoconjunctivitis, nail dystrophy, and alopecia. Upon presentation, he had jaundice, isolated splenomegaly, and severe failure to thrive. Laboratory tests showed transaminitis, cholestasis, and hypergammaglobulinemia. Abdominal ultrasound findings were suggestive of cirrhosis with compensated portal hypertension. The differential diagnosis included viral infection, inborn errors of metabolism, and autoimmune hepatitis. Results: Exome sequencing identified a novel homozygous pathogenic variant in the AIRE gene, NM_000383.4: c.1066dup p.(Arg356Profs*16), confirming the diagnosis. Conclusions: This study expands the genotypic and phenotypic spectrum of a rare inborn error of immunity in a child with chronic mucocutaneous candidiasis, enamel hypoplasia, and hepatitis.

## Linked entities

- **Genes:** AIRE (autoimmune regulator) [NCBI Gene 326]
- **Diseases:** chronic mucocutaneous candidiasis (MONDO:0015279), hepatitis (MONDO:0002251)

## Full-text entities

- **Genes:** GPT (glutamic--pyruvic transaminase) [NCBI Gene 2875] {aka AAT1, ALT, ALT1, GPT1, SGPT}, GALT (galactose-1-phosphate uridylyltransferase) [NCBI Gene 2592], AIRE (autoimmune regulator) [NCBI Gene 326] {aka AIRE1, APECED, APS1, APSI, PGA1}, IGF1 (insulin like growth factor 1) [NCBI Gene 3479] {aka IGF, IGF-I, IGFI, MGF}, SLC17A5 (solute carrier family 17 member 5) [NCBI Gene 26503] {aka AST, ISSD, NSD, SD, SIALIN, SIASD}, ALB (albumin) [NCBI Gene 213] {aka FDAHT, HSA, PRO0883, PRO0903, PRO1341}
- **Diseases:** alopecia (MESH:D000505), autoimmunity (MESH:D001327), splenomegaly (MESH:D013163), pneumonia (MESH:D011014), tyrosinemia type I (MESH:D020176), jaundice (MESH:D007565), pernicious anemia (MESH:D000752), respiratory distress (MESH:D012128), hypoparathyroidism (MESH:D007011), enteropathy (MESH:C538273), autosomal recessive disorder (MESH:D030342), cranial deformity (MESH:D003389), craniosynostosis (MESH:D003398), APECED (MESH:D016884), Wilson disease (MESH:D006527), otitis media (MESH:D010033), cirrhosis (MESH:D005355), injury to (MESH:D014947), gingival inflammation (MESH:D007249), chronic liver disease (MESH:D008107), short stature (MESH:D006130), mitochondrial disorders (MESH:D028361), Enamel hypoplasia (MESH:D003744), keratoconjunctivitis (MESH:D007637), diabetes (MESH:D003920), adrenal insufficiency (MESH:D000309), chronic mucocutaneous candidiasis (MESH:D002178), hepatitis A, B, and C (MESH:D006509), atrophy (MESH:D001284), galactosemia (MESH:D005693), inborn errors of metabolism (MESH:D008661), oral thrush (MESH:D002180), hypergammaglobulinemia (MESH:D006942), amino acid disorders (MESH:D000592), autoimmune or metabolic liver injury (MESH:D017093), Ectodermal Dystrophy (MESH:C536190), hepatitis (MESH:D056486), Candidiasis (MESH:D002177), erythema (MESH:D004890), intestinal dysfunction (MESH:D007410), viral meningitis (MESH:D008587), esotropia (MESH:D004948), chronic (MESH:D002908), sepsis (MESH:D018805), alopecia areata (MESH:D000506), Autoimmune hepatitis (MESH:D019693), gonadal dysfunction (MESH:D006058), end-stage liver disease (MESH:D058625), portal hypertension (MESH:D006975), viral infection (MESH:D014777), cloverleaf skull (MESH:C536884), exposure keratitis (MESH:D007634), hypothyroidism (MESH:D007037), nail dystrophy (MESH:D009260), dorsal pterygium (MESH:D000092142), inborn error of immunity (MESH:D007154), hypertrophy (MESH:D006984), cholestasis (MESH:D002779), failure to thrive (MESH:D005183), autosomal-recessive hepatopathies (MESH:D020754)
- **Chemicals:** ammonia (MESH:D000641), lactate (MESH:D019344), bilirubin (MESH:D001663), steroids (MESH:D013256), glucose (MESH:D005947), amino acid (MESH:D000596)
- **Species:** Cytomegalovirus (genus) [taxon 10358], human gammaherpesvirus 4 (Epstein Barr virus, no rank) [taxon 10376], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.967_979del13, c.1066dup, p.C322del13, p.Arg257Ter, p.Arg356fs, p.(Arg356Profs*16), c.1066dup, p.(Arg356Profs*16)
- **Cell lines:** NM_000383.4 — Bos taurus (Bovine), Finite cell line (CVCL_3074)

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12940173/full.md

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Source: https://tomesphere.com/paper/PMC12940173