# Physicochemical and Proteolytic Barriers Limiting Activity of Cpl-1 and Pal Endolysins in Human Circulation

**Authors:** Marek Adam Harhala, Katarzyna Gembara, Izabela Rybicka, Zuzanna Maria Kaźmierczak, Paulina Miernikiewicz, Krystyna Dąbrowska

PMC · DOI: 10.3390/cimb48020231 · Current Issues in Molecular Biology · 2026-02-21

## TL;DR

This study explores why endolysins like Cpl-1 and Pal lose effectiveness in human blood and proposes modified versions to improve their antibacterial potential.

## Contribution

Design of endolysin variants with enhanced resistance to blood proteases and physiological conditions.

## Key findings

- Physiological factors like blood pH and proteolytic activity significantly reduce Cpl-1 and Pal activity.
- Modified endolysin variants show improved performance in an ex vivo mouse model.
- One variant lacks a cleavage site for blood proteases, increasing its stability.

## Abstract

The growing prevalence of antibiotic-resistant bacterial infections poses a serious burden on healthcare systems worldwide. Endolysins are promising candidates for a new type of antibiotic due to their strong bacteriolytic activity. However, important limitations, including reduced activity and short persistence in the bloodstream, must still be addressed. We evaluated the key physicochemical and biological factors limiting the activity and stability of the endolysins Cpl-1 and Pal in blood. The analysis included ionic composition and strength, pH, bystander proteins, physiological temperature, and proteolytic activity. Our results indicate that the aforementioned factors significantly affect Cpl-1 and Pal, suggesting that physiological conditions in human circulation markedly restrict the anti-bacterial potential of endolysins. To overcome these limitations, we designed a set of Cpl-1 and Pal variants with modified amino acid compositions aimed at increasing their resistance to such physiological constraints. One variant demonstrated improved performance in an ex vivo mouse model and lacked a cleavage site for blood proteases.

## Linked entities

- **Proteins:** Cpl1 (plasma corticosterone level 1), PAM (peptidylglycine alpha-amidating monooxygenase)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Cpl1 (plasma corticosterone level 1) [NCBI Gene 107463] {aka Cpl-1}, F2 (coagulation factor II) [NCBI Gene 14061] {aka Cf-2, Cf2, FII}, Alb (albumin) [NCBI Gene 11657] {aka Alb-1, Alb1, BCL001, BCL002, BPL001}, SHCBP1 (SHC binding and spindle associated 1) [NCBI Gene 79801] {aka PAL}, Shcbp1 (Shc SH2-domain binding protein 1) [NCBI Gene 20419] {aka mPAL}
- **Diseases:** injury to (MESH:D014947), bacterial infections (MESH:D001424), sepsis (MESH:D018805), Pal WT (MESH:D009396)
- **Chemicals:** imidazole (MESH:C029899), water (MESH:D014867), SDS (MESH:D012967), NaCl (MESH:D012965), carbonate (MESH:D002254), choline (MESH:D002794), EDTA (MESH:D004492), Alanine (MESH:D000409), ampicillin (MESH:D000667), arabinose (MESH:D001089), agarose (MESH:D012685), LPS (MESH:D008070), Sytox  Green (MESH:C402795), polyvinylidene fluoride (MESH:C024865), PBS (MESH:D007854), KCl (MESH:D011189), Calcium (MESH:D002118), Magnesium (MESH:D008274), DMSO (MESH:D004121), KH2PO4 (-), Na+ (MESH:D012964), K+ (MESH:D011188), amino acids (MESH:D000596), phenylmethylsulfonyl fluoride (MESH:D010664), carbohydrates (MESH:D002241), Cl- (MESH:D002713)
- **Species:** Streptococcus pneumoniae (species) [taxon 1313], Streptococcus phage Dp-1 (species) [taxon 59241], Mus musculus (house mouse, species) [taxon 10090], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Bacteriophage sp. (species) [taxon 38018], Helicobacter pylori (species) [taxon 210], Homo sapiens (human, species) [taxon 9606], Clostridioides difficile (species) [taxon 1496]
- **Mutations:** I263R, D256L, alanine at positions 166, K255L, K281L, D194L, K330L, H14Y, S269R, K207L, K311L, T318E, K182L, H124Y, H90Y, R194L, histidine with tyrosine, K225L, E243L, K250L, D251L, D276E, K203L, S242R, G268E, D333L, H60K, D334L, D182L, K246L, H132K, E249L, D205L, H202Y, N324L, E252A, H111Y, H60Y, D247L
- **Cell lines:** B834 — Rattus norvegicus (Rat), Rat insulinoma, Cancer cell line (CVCL_2G77), C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12938970/full.md

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12938970/full.md

## References

72 references — full list in the complete paper: https://tomesphere.com/paper/PMC12938970/full.md

---
Source: https://tomesphere.com/paper/PMC12938970