# γ-Amino Carboxylic Acid Modification Enhances the Efficacy of Peptide Nucleic Acids Targeting miR-221-3p in Lung Cancer Cell Lines

**Authors:** Youngsim Yoon, Na-rae Joo, Taewoo Kim, Daeyoon Bae, Seohee Lee, Soyoung Pak, Junghyun Min, Jaejin Park, Youngjun Choi

PMC · DOI: 10.3390/cimb48020197 · Current Issues in Molecular Biology · 2026-02-10

## TL;DR

A new modification to PNAs improves their ability to target miR-221-3p in lung cancer cells, making them more effective for potential therapies.

## Contribution

A novel γ-amino carboxylic acid modification is introduced to enhance PNA efficacy in targeting miR-221-3p.

## Key findings

- γ-modified PNAs showed higher binding affinity and cellular uptake compared to unmodified PNAs.
- Modified PNAs effectively inhibited miR-221-3p and regulated downstream gene expression in lung cancer cells.

## Abstract

Peptide nucleic acids (PNAs) are versatile molecules with promising diagnostic and therapeutic applications, including gene expression regulation and miRNA targeting. However, their moderate biological efficacy limits their therapeutic application. This can be addressed by leveraging a key advantage of PNAs over other nucleic acids—the ease of modification, which enhances their functional properties. Notably, γ-modified PNAs have improved binding affinity and cellular uptake properties, underscoring the potential of backbone engineering. In this study, we introduced a novel γ-amino carboxylic acid modification into PNAs targeting miR-221-3p, a key miRNA implicated in various pathological processes. The binding affinity of the modified PNAs to their targets and their ability to inhibit miR-221-3p expression were considerably higher than those of unmodified PNAs in Lung cancer cell lines, leading to effective regulation of downstream gene and protein expression. These findings underscore the potential of γ-modified PNAs as a platform for developing miRNA-targeted therapeutics.

## Linked entities

- **Diseases:** lung cancer (MONDO:0005138)

## Full-text entities

- **Genes:** DCTN6 (dynactin subunit 6) [NCBI Gene 10671] {aka WS-3, WS3, p27}, Mir155 (microRNA 155) [NCBI Gene 387173] {aka Mirn155, mir-155, mmu-mir-155}, SYVN1 (synoviolin 1) [NCBI Gene 84447] {aka DER3, HRD1}, Cdkn1b (cyclin dependent kinase inhibitor 1B) [NCBI Gene 12576] {aka Kip1, p27, p27Kip1}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, ANXA5 (annexin A5) [NCBI Gene 308] {aka ANX5, CPB-I, ENX2, HEL-S-7, PP4, RPRGL3}, POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}, Mir210 (microRNA 210) [NCBI Gene 387206] {aka Mirn210, mir-210, mmu-mir-210}, ATF3 (activating transcription factor 3) [NCBI Gene 467], TAT (tyrosine aminotransferase) [NCBI Gene 6898], CDKN1B (cyclin dependent kinase inhibitor 1B) [NCBI Gene 1027] {aka CDKN4, KIP1, MEN1B, MEN4, P27KIP1}, GPX4 (glutathione peroxidase 4) [NCBI Gene 2879] {aka GPx-4, GSHPx-4, MCSP, PHGPx, SMDS, snGPx}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}
- **Diseases:** Lung Cancer (MESH:D008175), cancer (MESH:D009369), cervical cancer (MESH:D002583), injury to (MESH:D014947), beta-thalassemia (MESH:D017086), cytotoxicity (MESH:D064420), Necrosis (MESH:D009336), lymphoma (MESH:D008223)
- **Chemicals:** (Boc)2O (MESH:C027600), PNA (MESH:D020135), 9-fluorenylmethyl-succinimidyl carbonate (MESH:C054434), streptomycin (MESH:D013307), polyethylene glycol (MESH:D011092), carboxylic acid (MESH:D002264), Acids (MESH:D000143), (diacetoxyiodo)benzene (MESH:C008857), oxygen (MESH:D010100), FAM (MESH:C031179), O-(benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate (MESH:C074712), BODIPY (MESH:C095489), acetic acid (MESH:D019342), Peptide (MESH:D010455), glycine ethyl ester hydrochloride (MESH:C022010), TRIzol (MESH:C411644), amide (MESH:D000577), H2O (MESH:D014867), CPP (MESH:D057846), amine (MESH:D000588), m-cresol (MESH:C042041), TFA (MESH:D014269), NaBH3CN (MESH:C009282), MC (MESH:C061001), penicillin (MESH:D010406), NaHCO3 (MESH:D017693), propidium iodide (MESH:D011419), EA (MESH:C007650), Boc-Glu-OtBu (-), LiAlH4 (MESH:C042073), ether (MESH:D004986), DMSO (MESH:D004121), guanidine (MESH:D019791), PLGA (MESH:D000077182), Carboxyfluorescein (MESH:C024098), Tween-20 (MESH:D011136), polyvinylidene difluoride (MESH:C024865), hydrogen (MESH:D006859), LiOH (MESH:C028467), paraformaldehyde (MESH:C003043), lipid (MESH:D008055), DMF (MESH:D004126), DIEA (MESH:C027070), Na2CO3 (MESH:C005686), THF (MESH:C018674), CO2 (MESH:D002245)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), NCI-H1975 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_1511), HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12938969/full.md

## References

46 references — full list in the complete paper: https://tomesphere.com/paper/PMC12938969/full.md

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Source: https://tomesphere.com/paper/PMC12938969