# Phosphatidylserine Decarboxylase Regulates Retinal Ganglion Cell Neurite Outgrowth with Altered Somal Membrane Fluidics and Mitochondrial Morphology

**Authors:** Sean D. Meehan, Sofia Yarosh, Victoria Pereira, Isabella Moceri, Sanjoy K. Bhattacharya

PMC · DOI: 10.3390/biom16020276 · Biomolecules · 2026-02-09

## TL;DR

This study shows that reducing phosphatidylserine decarboxylase activity promotes retinal ganglion cell regeneration by altering membrane fluidity and mitochondrial health.

## Contribution

The novel finding is that PSD knockdown enhances RGC neurite outgrowth through changes in lipid metabolism and membrane properties.

## Key findings

- PSD knockdown increases retinal ganglion cell neurite outgrowth and somal membrane fluidity.
- PSD overexpression leads to fragmented mitochondria and reduced neurite growth.
- PSD inhibition with doxorubicin rescues growth in PSD-overexpressing cells.

## Abstract

Mitochondrial lipid metabolism is an emerging regulator of neuronal regeneration, yet its role remains poorly defined. We investigated the function of phosphatidylserine decarboxylase (PSD), a mitochondrial enzyme that converts phosphatidylserine to phosphatidylethanolamine (PE), in retinal ganglion cell (RGC) regeneration. Using human glaucomatous degenerating optic nerves, we found PE was aberrantly accumulated with an elevated PSD expression and activity. In contrast, transcriptomes of regenerating RGCs present downregulated PSD, implicating PSD as a potential negative regulator of axonal growth. Using AAV2-mediated gene modulation, we evaluated how PSD knockdown (PSDKD) and PSD overexpression (PSDOE) alter RGC neurite outgrowth in vitro while evaluating effects on mitochondrial morphology, membrane fluidity by C-Laurdan staining, and lipidomes by LC-MS analysis. PSDOE did not support RGC neurite outgrowth, fragmented mitochondria, and increased polyunsaturated triacylglycerols. PSDKD significantly enhanced RGC neurite outgrowth and increased somal membrane fluidity accompanied by decreased cholesterol and saturated triacylglycerols. Notably, Doxorubicin, which attenuates PSD activity, increased neurite growth in PSDOE RGCs, supporting PSD’s activity as a negative role for growth. Using the optic nerve crush degenerative model in C57BL/6 mice, we confirm PSDKD RGCs have higher growth competency in vivo. These findings indicate PSDKD positions RGCs in a more growth-permissive state.

## Linked entities

- **Genes:** PSD (pleckstrin and Sec7 domain containing) [NCBI Gene 5662]
- **Chemicals:** phosphatidylserine (PubChem CID 9547096), phosphatidylethanolamine (PubChem CID 5327011), doxorubicin (PubChem CID 31703), triacylglycerols (PubChem CID 5460048), cholesterol (PubChem CID 5997)
- **Diseases:** glaucoma (MONDO:0005041)

## Full-text entities

- **Genes:** GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, Cntf (ciliary neurotrophic factor) [NCBI Gene 12803], Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, Pzp2 (PZP alpha-2-macroglobulin like 2) [NCBI Gene 11287] {aka A1m, A2m, MAM, Pzp}, Mapk1 (mitogen-activated protein kinase 1) [NCBI Gene 26413] {aka 9030612K14Rik, ERK, Erk2, MAPK2, PRKM2, Prkm1}, Ptdss1 (phosphatidylserine synthase 1) [NCBI Gene 19210] {aka PSS-1, mKIAA0024}, Gdnf (glial cell line derived neurotrophic factor) [NCBI Gene 14573] {aka ATF}, Thy1 (thymus cell antigen 1, theta) [NCBI Gene 21838] {aka CD90, T25, Thy-1, Thy-1.2, Thy1.1, Thy1.2}, Tubb3 (tubulin, beta 3 class III) [NCBI Gene 22152] {aka 3200002H15Rik, M(beta)3, M(beta)6}, Tomm20 (translocase of outer mitochondrial membrane 20) [NCBI Gene 67952] {aka 1810060K07Rik, Gm19268, MAS20, MOM19, TOM20, mKIAA0016}, Bdnf (brain derived neurotrophic factor) [NCBI Gene 12064], Golga2 (golgin A2) [NCBI Gene 99412] {aka GM130}, Pemt (phosphatidylethanolamine N-methyltransferase) [NCBI Gene 18618] {aka PEAMT, PEMT2, PLMT, Pempt, Pempt2}, Pisd (phosphatidylserine decarboxylase) [NCBI Gene 320951] {aka 9030221M09Rik}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, FBXL15 (F-box and leucine rich repeat protein 15) [NCBI Gene 79176] {aka FBXO37, Fbl15, JET}, Ptdss2 (phosphatidylserine synthase 2) [NCBI Gene 27388] {aka PSS2}, Pou4f1 (POU domain, class 4, transcription factor 1) [NCBI Gene 18996] {aka Brn-3, Brn-3.0, Brn3, Brn3.0, Brn3a, E130119J07Rik}, Tmem131 (transmembrane protein 131) [NCBI Gene 56030] {aka 2610524E03Rik, CC28, D1Bwg0491e, Neg, RW1, YR-23}, PISD (phosphatidylserine decarboxylase) [NCBI Gene 23761] {aka DJ858B16, LIBF, PSDC, PSSC, dJ858B16.2}, Pten (phosphatase and tensin homolog) [NCBI Gene 19211] {aka 2310035O07Rik, A130070J02Rik, B430203M17Rik, MMAC1, PTENbeta, TEP1}, Ctbs (chitobiase) [NCBI Gene 74245] {aka 2210401K11Rik, CTB}, Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56717] {aka 2610315D21Rik, FRAP, FRAP2, Frap1, RAFT1, RAPT1}, Sparc (secreted acidic cysteine rich glycoprotein) [NCBI Gene 20692] {aka BM-40, ON}
- **Diseases:** dislocation (MESH:D004204), crush (MESH:D003444), mitochondrial fragmentation (MESH:D012892), glaucomatous degeneration (MESH:D009410), dysfunction (MESH:D006331), Glaucoma (MESH:D005901), RGC (MESH:D012173), tauopathies (MESH:D024801), glaucomatous ocular neurodegeneration (MESH:D015817), PSDKD (MESH:D015325), Nerves (MESH:C537568), Neuroblastoma (MESH:D009447), POAG (MESH:D005902), postoperative analgesia (MESH:D000699), bleeding (MESH:D006470), Liberfarb's syndrome (MESH:D005359), Alzheimer's diseases (MESH:D000544), glaucomatous optic neuropathy (MESH:D009901), Optic Nerve Injury (MESH:D020221), ONC (MESH:D000080344), injury to (MESH:D014947), Neurodegenerative disorders (MESH:D019636), Parkinson's (MESH:D010300), glaucomatous mitochondrial abnormalities (MESH:D028361), optic nerve atrophy (MESH:D009896), loss of peripheral vision (MESH:D014786)
- **Chemicals:** Lithium Chloride (MESH:D018021), PVDF (MESH:C024865), butanol (MESH:D000440), H (MESH:D006859), plasmalogen (MESH:D010955), KCl (MESH:D011189), buprenorphine (MESH:D002047), TBS-T (MESH:C027647), Tween-20 (MESH:D011136), FA (MESH:D005492), argon (MESH:D001128), DAPI (MESH:C007293), DMSO (MESH:D004121), CO2 (MESH:D002245), EGTA (MESH:D004533), L-glutamine (MESH:D005973), mannitol (MESH:D008353), PMME (MESH:C032000), ammonium acetate (MESH:C018824), chloroform (MESH:D002725), sucrose (MESH:D013395), PFA (MESH:C003043), Lipid (MESH:D008055), Forskolin (MESH:D005576), hydroxylamine (MESH:D019811), PS (MESH:D010718), oil (MESH:D009821), fatty acid (MESH:D005227), Alexa Fluor  488 (MESH:C000711379), PC (MESH:D010713), L-serine (MESH:D012694), PE (MESH:C483858), sphingomyelin (MESH:D013109), ethyl acetate (MESH:C007650), Alexa 488 Abcam (-), ethanolamine (MESH:D019856), Puromycin (MESH:D011691), Alexa Fluor 647 (MESH:C569686), HEPES (MESH:D006531), 1-butanol (MESH:D020001), Polyunsaturated fatty acids (MESH:D005231), Doxorubicin (MESH:D004317), CDP-diacylglycerol (MESH:D003567), SDS (MESH:D012967), isopropanol (MESH:D019840), MnCl2 (MESH:C025340), CaCl2 (MESH:D002122), BODIPY (MESH:C095489), DTT (MESH:D004229), glycine (MESH:D005998), cholesterol (MESH:D002784), erythromycin (MESH:D004917), Cardiolipin (MESH:D002308), H2O (MESH:D014867), Phospholipid (MESH:D010743), Ponceau S (MESH:C032756), TBS (MESH:D013725), heptane (MESH:D006536), PG (MESH:D010715), LPE (MESH:C008301)
- **Species:** Homo sapiens (human, species) [taxon 9606], adeno-associated virus 2 (no rank) [taxon 10804], Rhodopseudomonas faecalis (species) [taxon 99655], Mycoplasma (genus) [taxon 2093], Ovis aries (domestic sheep, species) [taxon 9940], Mus musculus (house mouse, species) [taxon 10090], Candida albicans (species) [taxon 5476]
- **Mutations:** C in 0, M014760L
- **Cell lines:** C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU), CRL-2267 — Homo sapiens (Human), Beta thalassemia, Transformed cell line (CVCL_BT14), BE(2)-M17 — Homo sapiens (Human), Neuroblastoma, Cancer cell line (CVCL_0167), M17 — Homo sapiens (Human), Melanoma, Cancer cell line (CVCL_D028), Neuro2a — Mus musculus (Mouse), Mouse neuroblastoma, Cancer cell line (CVCL_0470), BE(2) — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_A628), /6 — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_5985), RGC — Rattus norvegicus (Rat), Transformed cell line (CVCL_8140), CCL-131 — Mus musculus (Mouse), Undefined cell line type (CVCL_M023), HEK293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), PSDOE — Homo sapiens (Human), Breast adenocarcinoma, Cancer cell line (CVCL_A9BA), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12938676/full.md

## References

82 references — full list in the complete paper: https://tomesphere.com/paper/PMC12938676/full.md

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Source: https://tomesphere.com/paper/PMC12938676