# Differential Metabolic Changes in Zebrafish Embryos Are Induced by Discontinued Citalopram Exposure

**Authors:** Gwendolyn Cooper, Ryan J. North, Dana Auganova, Christa S. Merzdorf, Brian Bothner

PMC · DOI: 10.3390/biomedicines14020381 · Biomedicines · 2026-02-06

## TL;DR

Exposure to citalopram during early zebrafish development causes lasting metabolic changes, even after the drug is removed.

## Contribution

This study identifies specific metabolic changes in zebrafish embryos following transient citalopram exposure.

## Key findings

- Citalopram exposure altered arginine and proline metabolism in zebrafish embryos.
- Metabolomic changes suggest impacts on serotonin signaling and nitric oxide metabolism.
- Exposure led to dose-dependent, long-lasting metabolic effects despite normal morphology.

## Abstract

Background/Objectives: Citalopram is a selective serotonin reuptake inhibitor that is prescribed to relieve anxiety and depression. Widespread use has led to the contamination of freshwater systems downstream of wastewater treatment facilitates. Few studies have investigated the impact of citalopram on early embryonic development in humans or other species, despite the prevalence of intentional or unintentional exposure. Danio rerio (zebrafish) is a model organism for investigating effects of environmental exposure to xenobiotics on developmental outcomes in vertebrates. Methods: In this study, we examined the metabolome of developing zebrafish embryos exposed to citalopram hydrobromide concentrations (0.03–250 ng/mL) spanning environmental to therapeutic doses during the first 24 h post-fertilization. Exposure was followed by 24 h exposure-free development before harvest at 48 h. Results: Gross morphology of the embryos was normal, although changes were observed in the heart rates of citalopram-exposed embryos. Untargeted metabolomic and multivariate analyses revealed significant, nonlinear changes in the metabolome in response to citalopram exposure. Arginine and proline metabolism was significantly altered, potentially reflecting changes in serotonin signaling, nitric oxide metabolism, and polyamine synthesis. Conclusions: Together, these data demonstrate that transient exposure to citalopram can induce long-lasting metabolomic changes during development, including dose-dependent changes that include aberrant metabolic processes in the developing metabolome. As a result, this work reveals potential biomarkers for early developmental exposure.

## Linked entities

- **Chemicals:** citalopram (PubChem CID 2771), citalopram hydrobromide (PubChem CID 77995)
- **Species:** Danio rerio (taxon 7955)

## Full-text entities

- **Genes:** cbx2 (chromobox homolog 2 (Drosophila Pc class)) [NCBI Gene 327291] {aka pc1, wu:fd20e09, zgc:103563}, NR3C2 (nuclear receptor subfamily 3 group C member 2) [NCBI Gene 4306] {aka MCR, MLR, MR, NR3C2VIT}, RELN (reelin) [NCBI Gene 5649] {aka ETL7, LIS2, PRO1598, RL}, S100B (S100 calcium binding protein B) [NCBI Gene 6285] {aka NEF, S100, S100-B, S100beta}, SHH (sonic hedgehog signaling molecule) [NCBI Gene 6469] {aka HHG1, HLP3, HPE3, MCOPCB5, SMMCI, ShhNC}, Odc1 (ornithine decarboxylase 1) [NCBI Gene 24609] {aka Odc}
- **Diseases:** ADHD (MESH:D001289), pericardial edema (MESH:D004487), anxiety (MESH:D001007), metabolic disruptions (MESH:D019958), toxicity (MESH:D064420), abnormal (MESH:D000014), injury to (MESH:D014947), scoliosis (MESH:D012600), inflammation (MESH:D007249), Developmental abnormalities (MESH:D006130), yolk sac abnormalities (MESH:D018240), delayed psychomotor development (MESH:D002658), thyroid (MESH:D013966), delayed communication development (MESH:D003147), depression (MESH:D003866)
- **Chemicals:** urea (MESH:D014508), glycosphingolipid (MESH:D006028), Amino acid (MESH:D000596), lipoic acid (MESH:D008063), aspartate (MESH:D001224), leukotriene (MESH:D015289), creatine (MESH:D003401), sertraline (MESH:D020280), carbon (MESH:D002244), alanine (MESH:D000409), Arginine (MESH:D001120), acetone (MESH:D000096), sialic acid (MESH:D019158), putrescine (MESH:D011700), acetonitrile (MESH:C032159), Citalopram (MESH:D015283), serine (MESH:D012694), riboflavin (MESH:D012256), agmatine (MESH:D000376), propanoate (MESH:D011422), Proline (MESH:D011392), 1,3-octadiene (-), methionine (MESH:D008715), amino sugar (MESH:D000606), caffeine (MESH:D002110), oxygen (MESH:D010100), carnitine (MESH:D002331), formic acid (MESH:C030544), acid (MESH:D000143), polyunsaturated fatty acid (MESH:D005231), potassium (MESH:D011188), spermidine (MESH:D013095), Tryptophan (MESH:D014364), (-)-Epigallocatechin (MESH:C057580), glutamate (MESH:D018698), lysine (MESH:D008239), threonine (MESH:D013912), glycine (MESH:D005998), calcium (MESH:D002118), folate (MESH:D005492), ROS (MESH:D017382), 5-HT (MESH:D012701), NO (MESH:D009569), asparagine (MESH:D001216), phosphonate (MESH:D063065), Glutathione (MESH:D005978), citrate (MESH:D019343), 4-aminobutyraldehyde (MESH:C006509), beta-alanine (MESH:D015091), Polyamine (MESH:D011073), fluoxetine (MESH:D005473), Water (MESH:D014867), S-adenosylmethionine (MESH:D012436), spermine (MESH:D013096), terpenoid (MESH:D013729), cysteine (MESH:D003545)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606], Danio rerio (leopard danio, species) [taxon 7955], Xenopus laevis (African clawed frog, species) [taxon 8355]
- **Cell lines:** hESCs — Homo sapiens (Human), Embryonic stem cell (CVCL_UI95)

## Full text

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## Figures

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## References

91 references — full list in the complete paper: https://tomesphere.com/paper/PMC12938523/full.md

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Source: https://tomesphere.com/paper/PMC12938523