# Extracellular Vesicle-Mediated U1 snRNA Delivery Restores Aberrant Pre-mRNA Splicing in Human Cells

**Authors:** Hatice Esenkaya, Muhammet Karaman, Joe Bryant

PMC · DOI: 10.3390/biom16020278 · Biomolecules · 2026-02-10

## TL;DR

Researchers used extracellular vesicles to deliver U1 snRNA into cells, successfully correcting faulty RNA splicing linked to genetic diseases.

## Contribution

This is the first demonstration that EVs can deliver snRNAs to correct splicing defects in human cells.

## Key findings

- U1 snRNA-enriched EVs corrected up to 60% of abnormal splicing in β-globin minigene-expressing HeLa cells.
- Corrective effect was dependent on intact RNA cargo within EVs, as heat or RNase treatment abolished activity.
- EVs were confirmed to contain U1 snRNA and exosomal markers, validating their purity and content.

## Abstract

Splicing defects represent a significant class of human genetic disorders, yet strategies to directly correct aberrant splice-site recognition remain limited. The small nuclear RNA (snRNA) U1 plays a critical role in pre-messenger RNA splicing by base-pairing with the conserved 5′ splice-site ‘GU’ dinucleotide. Disruption of this interaction can lead to abnormal splicing or frameshift mutations, contributing to disease pathology. Extracellular vesicles (EVs) can transport small molecules to cells for therapeutic applications. Here, U1 snRNA-overexpressing HEK293T cells were used to generate approximately 120 nm-diameter U1 snRNA-enriched EVs, whose purity and content were confirmed by exosomal marker Western blots and reverse transcription–quantitative PCR. When HeLa cells expressing a β-globin minigene bearing a β-thalassaemia-like 5′ splice-site mutation were treated with U1-snRNA-enriched EVs, they corrected up to sixty percent of normal exon–intron junction recognition in a dose-dependent manner. Recovery was abolished by heat or RNase treatment, suggesting that intact vesicular RNA cargo was essential for activity. These findings provide the first demonstration that EVs can transport spliceosomal snRNAs capable of reconstituting splice-site recognition in recipient cells and introduce a novel class of RNA-based therapeutics that exploit the natural cargo-shuttling capacity of EVs to correct splicing defects associated with genetic disease.

## Linked entities

- **Species:** Homo sapiens (taxon 9606), Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** GDE1 (glycerophosphodiester phosphodiesterase 1) [NCBI Gene 51573] {aka 363E6.2, MIR16}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, CD81 (CD81 molecule) [NCBI Gene 975] {aka CVID6, S5.7, TAPA1, TSPAN28}, CD9 (CD9 molecule) [NCBI Gene 928] {aka BTCC-1, DRAP-27, MIC3, MRP-1, TSPAN-29, TSPAN29}, RNASE1 (ribonuclease A family member 1, pancreatic) [NCBI Gene 6035] {aka RAC1, RIB1, RNS1}, SYNCRIP (synaptotagmin binding cytoplasmic RNA interacting protein) [NCBI Gene 10492] {aka GRY-RBP, GRYRBP, HNRNPQ, HNRPQ1, NSAP1, PP68}, CD63 (CD63 molecule) [NCBI Gene 967] {aka AD1, HOP-26, ME491, MLA1, OMA81H, Pltgp40}, HNRNPA2B1 (heterogeneous nuclear ribonucleoprotein A2/B1) [NCBI Gene 3181] {aka HNRNPA2, HNRNPB1, HNRPA2, HNRPA2B1, HNRPB1, IBMPFD2}, HBB (hemoglobin subunit beta) [NCBI Gene 3043] {aka CD113t-C, ECYT6, beta-globin}
- **Diseases:** toxicity (MESH:D064420), deficiency of functional beta-globin chains (MESH:C564192), COVID-19 (MESH:D000086382), muscular dystrophies (MESH:D009136), anaemia (MESH:D000743), spinal muscular atrophy (MESH:D009134), cancers (MESH:D009369), beta-thalassaemia disease (MESH:D004194), neurodegenerative and muscular disorders (MESH:D019636), injury to (MESH:D014947), Duchenne muscular dystrophy (MESH:D020388), genetic defect (MESH:D030342), beta-Thalassaemia (MESH:D017086)
- **Chemicals:** Lipofectamine (MESH:C086724), nusinersen (MESH:C000590926), penicillin (MESH:D010406), DMEM (-), glucose (MESH:D005947), PBS (MESH:D007854), PVDF (MESH:C024865), lipids (MESH:D008055), agarose (MESH:D012685), CO2 (MESH:D002245), streptomycin (MESH:D013307), ethidium bromide (MESH:D004996), EDTA (MESH:D004492), SDS (MESH:D012967), Glycogen (MESH:D006003)
- **Species:** Homo sapiens (human, species) [taxon 9606], Bos taurus (bovine, species) [taxon 9913], Mus musculus (house mouse, species) [taxon 10090], Escherichia coli (E. coli, species) [taxon 562], Mycoplasma (genus) [taxon 2093]
- **Cell lines:** HEK293 — Homo sapiens (Human), Transformed cell line (CVCL_0045), DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531), HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), HEK293T — Homo sapiens (Human), Transformed cell line (CVCL_0063)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12938379/full.md

## References

82 references — full list in the complete paper: https://tomesphere.com/paper/PMC12938379/full.md

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Source: https://tomesphere.com/paper/PMC12938379