# The Gut Microbiota–Mast Cell Axis in Intestinal Homeostasis and Food Allergy Pathogenesis

**Authors:** Alessia Carnevale, Caterina Marangio, Erisa Putro, Rosa Molfetta, Rossella Paolini

PMC · DOI: 10.3390/biom16020254 · Biomolecules · 2026-02-05

## TL;DR

This review explores how gut microbes and mast cells interact to influence intestinal health and food allergies.

## Contribution

The paper highlights novel molecular mechanisms of the microbiota–mast cell axis in food allergy pathogenesis.

## Key findings

- The intestinal microbiota regulates mast cell development and activation.
- Dysbiosis increases susceptibility to allergic sensitization and mast cell reactivity.
- Targeting the microbiota–mast cell axis offers potential therapeutic strategies for food allergy.

## Abstract

Food allergy is an increasing global health burden, particularly in industrialized countries, with rising prevalence in both pediatric and adult populations. It is characterized by exaggerated immune responses to innocuous dietary antigens, leading to clinical manifestations ranging from mild gastrointestinal symptoms to life-threatening anaphylaxis. Mast cells are central effectors in the pathophysiology of food allergy, initiating and amplifying allergic inflammation through the release of a broad array of mediators upon activation. Recent studies have revealed that the intestinal microbiota plays a critical role in shaping immune responses, including the regulation of mast cell development, maturation, and activation. Moreover, dysbiosis has been associated with increased susceptibility to allergic sensitization and heightened mast cell reactivity. This review explores the molecular mechanisms underlying the microbiota–mast cell axis in the context of intestinal homeostasis and food allergy with a particular emphasis on the regulation of mast cell effector functions by TLR signaling and microbial metabolites. We also discuss the therapeutic potential of targeting the microbiota–mast cell axis as novel strategies to restore immune tolerance. Understanding this complex crosstalk opens new avenues for translational approaches in the prevention and treatment of food allergy.

## Linked entities

- **Diseases:** food allergy (MONDO:0700226), anaphylaxis (MONDO:0100053)

## Full-text entities

- **Genes:** IGHE (immunoglobulin heavy constant epsilon) [NCBI Gene 3497] {aka IgE}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, CEBPA (CCAAT enhancer binding protein alpha) [NCBI Gene 1050] {aka C/EBP-alpha, CEBP}, OCLN (occludin) [NCBI Gene 100506658] {aka BLCPMG, PPP1R115, PTORCH1}, IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, MUC2 (mucin 2, oligomeric mucus/gel-forming) [NCBI Gene 4583] {aka MLP, MUC-2, SMUC}, ST2 (suppression of tumorigenicity 2) [NCBI Gene 6761], ITGAE (integrin subunit alpha E) [NCBI Gene 3682] {aka CD103, HUMINAE}, TLR2 (toll like receptor 2) [NCBI Gene 7097] {aka CD282, TIL4}, GATA3 (GATA binding protein 3) [NCBI Gene 2625] {aka HDR, HDRS}, TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}, IL22 (interleukin 22) [NCBI Gene 50616] {aka IL-21, IL-22, IL-D110, IL-TIF, ILTIF, TIFIL-23}, LYN (LYN proto-oncogene, Src family tyrosine kinase) [NCBI Gene 4067] {aka JTK8, SAIDV, p53Lyn, p56Lyn}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, CD79A (CD79a molecule) [NCBI Gene 973] {aka IGA, IGAlpha, MB-1, MB1}, MYLK3 (myosin light chain kinase 3) [NCBI Gene 91807] {aka MLCK, MLCK2, caMLCK}, AHR (aryl hydrocarbon receptor) [NCBI Gene 196] {aka FVH3, RP85, bHLHe76}, CCL2 (C-C motif chemokine ligand 2) [NCBI Gene 6347] {aka GDCF-2, HC11, HSMCR30, MCAF, MCP-1, MCP1}, GPR166P (G protein-coupled receptor 166, pseudogene) [NCBI Gene 442206] {aka GPCR, PGR9}, CXCR2 (C-X-C motif chemokine receptor 2) [NCBI Gene 3579] {aka CD182, CDw128b, CMKAR2, IL8R2, IL8RA, IL8RB}, FLG (filaggrin) [NCBI Gene 2312] {aka ATOD2, FLG-1, FLG1}, TLR9 (toll like receptor 9) [NCBI Gene 54106] {aka CD289}, TLR3 (toll like receptor 3) [NCBI Gene 7098] {aka CD283, IIAE2, IMD83}, VIP (vasoactive intestinal peptide) [NCBI Gene 7432] {aka PHM27}, MMP2 (matrix metallopeptidase 2) [NCBI Gene 4313] {aka CLG4, CLG4A, MMP-2, MMP-II, MONA, TBE-1}, ICAM1 (intercellular adhesion molecule 1) [NCBI Gene 3383] {aka BB2, CD54, P3.58}, TNFSF4 (TNF superfamily member 4) [NCBI Gene 7292] {aka CD134L, CD252, GP34, OX-40L, OX4OL, TNLG2B}, LGALS9 (galectin 9) [NCBI Gene 3965] {aka HUAT, LGALS9A}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, MADCAM1 (mucosal vascular addressin cell adhesion molecule 1) [NCBI Gene 8174] {aka MACAM1}, TLR5 (toll like receptor 5) [NCBI Gene 7100] {aka MELIOS, SLE1, SLEB1, TIL3}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, IL25 (interleukin 25) [NCBI Gene 64806] {aka IL17E}, CLDN5 (claudin 5) [NCBI Gene 7122] {aka AWAL, BEC1, CPETRL1, TMDVCF, TMVCF}, LAT (linker for activation of T cells) [NCBI Gene 27040] {aka IMD52, LAT1, pp36}, IL33 (interleukin 33) [NCBI Gene 90865] {aka C9orf26, DVS27, IL1F11, NF-HEV, NFEHEV}, CCL26 (C-C motif chemokine ligand 26) [NCBI Gene 10344] {aka IMAC, MIP-4a, MIP-4alpha, SCYA26, TSC-1}, MAP3K7 (mitogen-activated protein kinase kinase kinase 7) [NCBI Gene 6885] {aka CSCF, FMD2, MEKK7, TAK1, TGF1a}, mucin [NCBI Gene 100508689], TICAM1 (TIR domain containing adaptor molecule 1) [NCBI Gene 148022] {aka IIAE6, MyD88-3, PRVTIRB, TICAM-1, TRIF}, F11R (F11 receptor) [NCBI Gene 50848] {aka CD321, JAM, JAM1, JAMA, JCAM, KAT}, F2RL1 (F2R like trypsin receptor 1) [NCBI Gene 2150] {aka GPR11, PAR2}, MAPK8 (mitogen-activated protein kinase 8) [NCBI Gene 5599] {aka JNK, JNK-46, JNK1, JNK1A2, JNK21B1/2, PRKM8}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, CREB1 (cAMP responsive element binding protein 1) [NCBI Gene 1385] {aka CREB, CREB-1}, CLDN2 (claudin 2) [NCBI Gene 9075] {aka OAZON, claudin-2}, TNFRSF4 (TNF receptor superfamily member 4) [NCBI Gene 7293] {aka ACT35, CD134, IMD16, OX40, TXGP1L}, HDAC9 (histone deacetylase 9) [NCBI Gene 9734] {aka HD7, HD7b, HD9, HDAC, HDAC7B, HDAC9B}, VCAM1 (vascular cell adhesion molecule 1) [NCBI Gene 7412] {aka CD106, INCAM-100}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, KIT (KIT proto-oncogene, receptor tyrosine kinase) [NCBI Gene 3815] {aka C-Kit, CD117, MASTC, PBT, SCFR}, MYD88 (MYD88 innate immune signal transduction adaptor) [NCBI Gene 4615] {aka IMD68, MYD88D, WM1}, BTK (Bruton tyrosine kinase) [NCBI Gene 695] {aka AGMX1, AT, ATK, BPK, IGHD3, IMD1}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, IL13 (interleukin 13) [NCBI Gene 3596] {aka IL-13, P600}, SRGN (serglycin) [NCBI Gene 5552] {aka PPG, PRG, PRG1}, SYK (spleen associated tyrosine kinase) [NCBI Gene 6850] {aka IMD82, p72-Syk}, IL5 (interleukin 5) [NCBI Gene 3567] {aka EDF, IL-5, TRF}, JUNB (JunB proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 3726] {aka AP-1}, TRAF6 (TNF receptor associated factor 6) [NCBI Gene 7189] {aka MGC:3310, RNF85}
- **Diseases:** gastrointestinal symptoms (MESH:D012817), chronic inflammation (MESH:D007249), circulatory collapse (MESH:D012769), injury to (MESH:D014947), EoE (MESH:D057765), abdominal pain (MESH:D015746), airway edema (MESH:D004487), asthma (MESH:D001249), allergic symptoms (MESH:D063926), cow's milk allergy (MESH:D016269), dysbiosis (MESH:D064806), Peanut allergy (MESH:D021183), atopy (MESH:C564133), immune-mediated (MESH:C567355), diarrhea (MESH:D003967), type I (immediate) hypersensitivity disorders (MESH:D006969), urticaria (MESH:D014581), obesity (MESH:D009765), tachycardia (MESH:D013610), FAs (MESH:C535950), pruritus (MESH:D011537), celiac disease (MESH:D002446), vomiting (MESH:D014839), anaphylactic shock (MESH:D000707), hypotension (MESH:D007022), airway obstruction (MESH:D000402), bronchospasm (MESH:D001986), respiratory distress (MESH:D012128), hyperreactivity (MESH:D016535), angioedema (MESH:D000799), epithelial (MESH:D009375), rhinorrhea (MESH:D012818), cough (MESH:D003371), FA (MESH:D005512), MC (MESH:D000090362), infections (MESH:D007239), cardiovascular collapse (MESH:D002318), colitis (MESH:D003092), allergic rhinitis (MESH:D065631), gastrointestinal disorders (MESH:D005767), allergic (MESH:D004342), OIT (MESH:D020820), irritable bowel syndrome (MESH:D043183), inflammatory bowel disease (MESH:D015212), tissue injury (MESH:D017695), intestinal (MESH:D007410), atopic dermatitis (MESH:D003876), erythema (MESH:D004890)
- **Chemicals:** oxygen (MESH:D010100), Histamine (MESH:D006632), Epinephrine (MESH:D004837), lipoteichoic acid (MESH:C009900), polysaccharides (MESH:D011134), lactic acid (MESH:D019344), luminal (MESH:D010634), NO (MESH:D009569), prostaglandin D2 (MESH:D015230), valerate (MESH:D014631), oligosaccharides (MESH:D009844), RA (MESH:D014212), Ca2+ (-), bile acid (MESH:D001647), H2S (MESH:D006862), propionate (MESH:D011422), Butyrate (MESH:D002087), leukotrienes (MESH:D015289), amino acid (MESH:D000596), lipid (MESH:D008055), LPS (MESH:D008070), FICZ (MESH:C111855), Prebiotics (MESH:D056692), indole (MESH:C030374), glucose (MESH:D005947), omalizumab (MESH:D000069444), SCFA (MESH:D005232), Acetate (MESH:D000085), Tryptophan (MESH:D014364)
- **Species:** Escherichia coli (E. coli, species) [taxon 562], Candida albicans (species) [taxon 5476], Lacticaseibacillus rhamnosus GG (strain) [taxon 568703], Mus musculus (house mouse, species) [taxon 10090], Mediterraneibacter gnavus (species) [taxon 33038], Enterococcus faecalis (species) [taxon 1351], Clostridia (class) [taxon 186801], Roseburia (genus) [taxon 841], Arachis hypogaea (goober, species) [taxon 3818], Clostridium (genus) [taxon 1485], Faecalibacterium prausnitzii (species) [taxon 853], Homo sapiens (human, species) [taxon 9606], Bifidobacterium (genus) [taxon 1678], Bacteroides (genus) [taxon 816], Bos taurus (bovine, species) [taxon 9913], Akkermansia (genus) [taxon 239934], Enterobacteriaceae (enterobacteria, family) [taxon 543], Lactiplantibacillus plantarum (species) [taxon 1590]

## Full text

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## References

171 references — full list in the complete paper: https://tomesphere.com/paper/PMC12938359/full.md

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Source: https://tomesphere.com/paper/PMC12938359