# Autophagy in Cancer: Context-Dependent Regulation and Precision Nanomedicine-Enabled Therapeutic Targeting

**Authors:** Yuzhi Lu, Ang Li, Andong Liu, Meng Li, Meng Wang

PMC · DOI: 10.3390/biomedicines14020416 · Biomedicines · 2026-02-12

## TL;DR

Autophagy's role in cancer is complex and context-dependent, and new nanomedicine strategies offer precise ways to target it for better cancer treatments.

## Contribution

The paper introduces a framework for context-aware autophagy targeting using nanomedicine to address tumor heterogeneity and improve therapeutic outcomes.

## Key findings

- Autophagy suppresses early tumors but supports progression and resistance in advanced stages.
- Nanomedicine enables precise, spatiotemporal modulation of autophagy to reduce toxicity and enhance efficacy.
- Tumor microenvironment significantly influences autophagy dependency and therapeutic response.

## Abstract

Autophagy is a highly conserved cellular degradation process essential for maintaining cellular homeostasis, yet its role in cancer is fundamentally context dependent. Increasing evidence indicates that autophagy suppresses tumor initiation by preserving genomic and metabolic integrity, while paradoxically supporting tumor progression, therapy resistance, and immune evasion at advanced stages. This functional duality presents a major challenge for therapeutic targeting and largely reflects the spatiotemporal heterogeneity of autophagy regulation across tumor stages, cancer cell subpopulations, and the tumor microenvironment (TME). In this review, we argue that autophagy-related proteins should be conceptualized as context-dependent therapeutic nodes rather than universally actionable targets. We systematically examine key autophagy regulators, including Beclin-1, p62/SQSTM1, mTOR, and p53, and analyze how their functions are shaped by tumor stage, genetic background, and microenvironmental cues such as hypoxia, immune pressure, and stromal interactions. We further highlight the pivotal role of the TME in determining autophagy dependency and therapeutic vulnerability, providing mechanistic insight into why autophagy modulation without microenvironmental consideration often yields inconsistent outcomes. From a precision medicine perspective, we discuss how nanotechnology-based delivery systems enable spatially and temporally controlled modulation of autophagy, thereby addressing intratumoral heterogeneity and reducing systemic toxicity. By integrating molecular profiling, TME characteristics, and nanomedicine-enabled targeting strategies, this review outlines a rational framework for exploiting autophagy in cancer therapy. Together, these insights provide a foundation for the development of context-aware, autophagy-targeted interventions and advance the pursuit of more effective and personalized cancer treatments.

## Linked entities

- **Genes:** BECN1 (beclin 1) [NCBI Gene 8678], MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475], TP53 (tumor protein p53) [NCBI Gene 7157]
- **Proteins:** BECN1 (beclin 1), MTOR (mechanistic target of rapamycin kinase), TP53 (tumor protein p53)
- **Diseases:** cancer (MONDO:0004992)

## Full-text entities

- **Genes:** MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, TFRC (transferrin receptor) [NCBI Gene 7037] {aka CD71, IMD46, T9, TFR, TFR1, TR}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, ALB (albumin) [NCBI Gene 213] {aka FDAHT, HSA, PRO0883, PRO0903, PRO1341}, SQSTM1 (sequestosome 1) [NCBI Gene 8878] {aka A170, DMRV, EBIAP, FTDALS3, NADGP, OSIL}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, BECN1 (beclin 1) [NCBI Gene 8678] {aka ATG6, VPS30, beclin1}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, HSPA8 (heat shock protein family A (Hsp70) member 8) [NCBI Gene 3312] {aka HEL-33, HEL-S-72p, HSC54, HSC70, HSC71, HSP71}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, ERBB2 (erb-b2 receptor tyrosine kinase 2) [NCBI Gene 2064] {aka CD340, HER-2, HER-2/neu, HER2, MLN 19, MLN-19}, MAP1LC3A (microtubule associated protein 1 light chain 3 alpha) [NCBI Gene 84557] {aka ATG8E, LC3, LC3A, MAP1ALC3, MAP1BLC3}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}
- **Diseases:** CMA (MESH:C564093), toxicity (MESH:D064420), lung and ovarian cancer (MESH:D010051), solid (MESH:D018250), pancreatic cancer (MESH:D010190), injury to (MESH:D014947), Cancer (MESH:D009369), tumorigenesis (MESH:D063646), Hypoxic (MESH:D002534), Hypoxia (MESH:D000860), hematological malignancies (MESH:D019337)
- **Chemicals:** HCQ (MESH:D006886), doxorubicin (MESH:D004317), VPS34 (-), poly (beta-amino ester) (MESH:C507253), reactive oxygen species (MESH:D017382), CQ (MESH:D002738), Oxygen (MESH:D010100), metal (MESH:D008670), rapamycin (MESH:D020123), paclitaxel (MESH:D017239)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12938163/full.md

## References

131 references — full list in the complete paper: https://tomesphere.com/paper/PMC12938163/full.md

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Source: https://tomesphere.com/paper/PMC12938163