# The Oncogenic Role of Long Non-Coding RNA NEAT1 in Head and Neck Squamous Cell Carcinoma: From Molecular Mechanisms to Clinical Implications

**Authors:** Yuanxin Shi, Bin Chen, Guohui Bai

PMC · DOI: 10.3390/biology15040307 · Biology · 2026-02-10

## TL;DR

This paper reviews how the long non-coding RNA NEAT1 contributes to head and neck cancer progression and its potential as a biomarker and therapeutic target.

## Contribution

The paper provides a comprehensive review of NEAT1's molecular mechanisms and clinical implications in HNSCC.

## Key findings

- NEAT1 promotes HNSCC progression by acting as a ceRNA for miRNAs like miR-125b-5p and miR-34a-5p.
- High NEAT1 expression correlates with metastasis and poor survival in HNSCC patients.
- Nanoparticle-based gene silencing offers a potential therapeutic strategy to target NEAT1.

## Abstract

Head and neck squamous cell carcinoma (HNSCC) is an aggressive cancer with limited treatment options and poor survival rates. This review focuses on a specific long non-coding RNA NEAT1 (LncRNA NEAT1), which is often found at high levels in HNSCC. We summarize how LncRNA NEAT1 acts as a key driver of cancer progression—promoting tumor growth, spread, and resistance to therapy—by interacting with multiple microRNAs and activating several cancer-related signaling pathways. Clinically, high LncRNA NEAT1 expression is linked to advanced disease stage, metastasis, and worse patient outcomes, indicating its potential as a diagnostic and prognostic biomarker. Although directly targeting LncRNA NEAT1 therapeutically remains challenging, emerging approaches such as nanoparticle-based gene silencing offer promising strategies. Understanding the role of LncRNA NEAT1 may help advance precision medicine and improve future treatments for HNSCC patients.

Head and neck squamous cell carcinoma (HNSCC) is an aggressive malignancy with poor patient outcomes. The long non-coding RNA NEAT1 (lncRNA NEAT1) has emerged as a critical driver of HNSCC pathogenesis. This review synthesizes current knowledge on lncRNA NEAT1’s aberrant expression, molecular mechanisms, and functional roles in HNSCC. LncRNA NEAT1 is significantly upregulated in tumors and promotes progression by acting as a competing endogenous RNA (ceRNA) for multiple miRNAs, such as miR-125b-5p, miR-204, and miR-34a-5p, thereby regulating downstream targets including SLC1A5, ZEB1, and components of the Wnt/β-catenin pathway. These interactions drive key oncogenic processes, including proliferation, metastasis, epithelial–mesenchymal transition, therapy resistance, and cell death inhibition. Clinically, high lncRNA NEAT1 expression correlates with advanced T stage, lymph node metastasis, and reduced survival, underscoring its potential as a diagnostic and prognostic biomarker. Therapeutically, emerging approaches such as nanoparticle-mediated delivery of siRNA/shRNA offer a promising strategy to target lncRNA NEAT1, potentially synergizing with existing immunotherapies. Although clinical translation remains challenging, lncRNA NEAT1 represents a highly promising biological target for future precision oncology in HNSCC.

## Linked entities

- **Genes:** NEAT1 (nuclear paraspeckle assembly transcript 1) [NCBI Gene 283131]
- **Diseases:** Head and Neck Squamous Cell Carcinoma (MONDO:0010150), HNSCC (MONDO:0010150)

## Full-text entities

- **Genes:** ZEB1 (zinc finger E-box binding homeobox 1) [NCBI Gene 6935] {aka AREB6, BZP, DELTAEF1, FECD6, NIL2A, PPCD3}, AGRN (agrin) [NCBI Gene 375790] {aka AGRIN, CMS8, CMSPPD}, Rassf1 (Ras association (RalGDS/AF-6) domain family member 1) [NCBI Gene 56289] {aka 123F2, NORE2A, RDA32, REH3P21, Rassf1A, Rassf1B}, PVT1 (Pvt1 oncogene) [NCBI Gene 5820] {aka LINC00079, MIR1204HG, NCRNA00079, TP53LC09, onco-lncRNA-100}, MAP2K1 (mitogen-activated protein kinase kinase 1) [NCBI Gene 5604] {aka CFC3, MAPKK1, MEK1, MEL, MKK1, PRKMK1}, CDC5L (cell division cycle 5 like) [NCBI Gene 988] {aka CDC5, CDC5-LIKE, CEF1, PCDC5RP, dJ319D22.1}, FASLG (Fas ligand) [NCBI Gene 356] {aka ALPS1B, APT1LG1, APTL, CD178, CD95-L, CD95L}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, Vegfa (vascular endothelial growth factor A) [NCBI Gene 22339] {aka L-VEGF, Vegf, Vpf}, IGF1 (insulin like growth factor 1) [NCBI Gene 3479] {aka IGF, IGF-I, IGFI, MGF}, VIM (vimentin) [NCBI Gene 7431], SFPQ (splicing factor proline and glutamine rich) [NCBI Gene 6421] {aka POMP100, PPP1R140, PSF}, Cd24a (CD24a antigen) [NCBI Gene 12484] {aka Cd24, HSA, Ly-52, nectadrin}, Slc1a5 (solute carrier family 1 (neutral amino acid transporter), member 5) [NCBI Gene 20514] {aka AAAT, ASCT2, ATBO, M7V1, M7VS1, R16}, Mir155 (microRNA 155) [NCBI Gene 387173] {aka Mirn155, mir-155, mmu-mir-155}, Cdkn2a (cyclin dependent kinase inhibitor 2A) [NCBI Gene 12578] {aka ARF-INK4a, Arf, INK4a-ARF, Ink4a/Arf, MTS1, Pctr1}, HOXA11 (homeobox A11) [NCBI Gene 3207] {aka HOX1, HOX1I, RUSAT1}, MMP2 (matrix metallopeptidase 2) [NCBI Gene 4313] {aka CLG4, CLG4A, MMP-2, MMP-II, MONA, TBE-1}, MALAT1 (metastasis associated lung adenocarcinoma transcript 1) [NCBI Gene 378938] {aka HCN, LINC00047, NCRNA00047, NEAT2, PRO2853, miPEP-52}, NONO (non-POU domain containing octamer binding) [NCBI Gene 4841] {aka MRXS34, NMT55, NRB54, P54, P54NRB, PPP1R114}, EZH2 (enhancer of zeste 2 polycomb repressive complex 2 subunit) [NCBI Gene 2146] {aka ENX-1, ENX1, EZH2b, KMT6, KMT6A, WVS}, Mir129 (microRNA 129) [NCBI Gene 387148] {aka Mirn129}, HGF (hepatocyte growth factor) [NCBI Gene 3082] {aka DFNB39, F-TCF, HGFB, HPTA, SF}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, Fzd3 (frizzled class receptor 3) [NCBI Gene 14365] {aka D930050A07Rik, Fz3, fz-3, mFz3}, MIR204 (microRNA 204) [NCBI Gene 406987] {aka MIRN204, RDICC, miRNA204, mir-204}, Mir1955 (microRNA 1955) [NCBI Gene 100316756] {aka mir-1955, mmu-mir-1955}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, Rgs20 (regulator of G-protein signaling 20) [NCBI Gene 58175] {aka 2900073E09Rik, Rgsz1}, Pdcd1 (programmed cell death 1) [NCBI Gene 18566] {aka Ly101, PD-1, Pdc1}, Ctnnb1 (catenin beta 1) [NCBI Gene 12387] {aka Bfc, Catnb, Mesc}, HCG22 (HLA complex group 22) [NCBI Gene 285834] {aka PBMUCL2}, CDH2 (cadherin 2) [NCBI Gene 1000] {aka ACOGS, ADHD8, ARVD14, CD325, CDHN, CDw325}, Cd3e (CD3 antigen, epsilon polypeptide) [NCBI Gene 12501] {aka CD3, CD3epsilon, T3e}, RSF1 (remodeling and spacing factor 1) [NCBI Gene 51773] {aka HBXAP, RSF-1, XAP8, p325}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, Mir107 (microRNA 107) [NCBI Gene 723826] {aka Mirn107, mir-107, mmu-mir-107}, TWIST1 (twist family bHLH transcription factor 1) [NCBI Gene 7291] {aka ACS3, BPES2, BPES3, CRS, CRS1, CSO}, MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318] {aka CLG4B, GELB, MANDP2, MMP-9}, ubiquitin [NCBI Gene 107786399], CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, Bcl2 (B cell leukemia/lymphoma 2) [NCBI Gene 12043] {aka Bcl-2, C430015F12Rik, D630044D05Rik, D830018M01Rik}, NEAT1 (nuclear paraspeckle assembly transcript 1) [NCBI Gene 283131] {aka LINC00084, NCRNA00084, TP53LC15, TncRNA, VINC}, FAS (Fas cell surface death receptor) [NCBI Gene 355] {aka ALPS1A, APO-1, APT1, CD95, FAS1, FASTM}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, LINC00491 (long intergenic non-protein coding RNA 491) [NCBI Gene 285708], LINC01133 (long intergenic non-protein coding RNA 1133) [NCBI Gene 100505633], SNAI1 (snail family transcriptional repressor 1) [NCBI Gene 6615] {aka SLUGH2, SNA, SNAH, SNAIL, SNAIL1, dJ710H13.1}, CD274 (CD274 molecule) [NCBI Gene 29126] {aka ADMIO5, B7-H, B7H1, PD-L1, PDCD1L1, PDCD1LG1}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, RAF1 (Raf-1 proto-oncogene, serine/threonine kinase) [NCBI Gene 5894] {aka CMD1NN, CRAF, NS5, Raf-1, c-Raf}, Neat1 (nuclear paraspeckle assembly transcript 1 (non-protein coding)) [NCBI Gene 66961] {aka 2310043N10Rik, VINC}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, IGF2BP1 (insulin like growth factor 2 mRNA binding protein 1) [NCBI Gene 10642] {aka CRD-BP, CRDBP, IMP-1, IMP1, VICKZ1, ZBP1}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, SLC1A5 (solute carrier family 1 member 5) [NCBI Gene 6510] {aka AAAT, ASCT2, ATBO, M7V1, M7VS1, R16}, Havcr2 (hepatitis A virus cellular receptor 2) [NCBI Gene 171285] {aka TIM-3, Tim3, Timd3}, Cdk6 (cyclin dependent kinase 6) [NCBI Gene 12571] {aka Crk2}, ALKBH5 (alkB homolog 5, RNA demethylase) [NCBI Gene 54890] {aka ABH5, OFOXD, OFOXD1}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}
- **Diseases:** cervical cancer (MESH:D002583), pancreatic cancer (MESH:D010190), injury to (MESH:D014947), hepatic dysfunction (MESH:D008107), prostate cancer (MESH:D011471), melanoma (MESH:D008545), glioma (MESH:D005910), cancers (MESH:D009369), carcinogenesis (MESH:D063646), gastric cancer (MESH:D013274), lung adenocarcinoma (MESH:D000077192), hypoxic (MESH:D002534), lung squamous cell carcinoma (MESH:D002294), HNSCC (MESH:D000077195), non-small cell lung cancer (MESH:D002289), HPV infection (MESH:D030361), tumorigenic (MESH:D002471), thyroid cancer (MESH:D013964), endometrial cancer (MESH:D016889), malnutrition (MESH:D044342), colon cancer (MESH:D015179), anemia (MESH:D000740), impaired chewing and swallowing functions (MESH:D003680), metastases (MESH:D009362), toxicities (MESH:D064420), ovarian cancer (MESH:D010051), speech disorders (MESH:D013064), facial disfigurement (MESH:D005153), cervical lymph node metastases (MESH:D008207), breast cancer (MESH:D001943), retinoblastoma (MESH:D012175), glioblastoma (MESH:D005909), bladder cancer (MESH:D001749), renal cell carcinoma (MESH:D002292), nasopharyngeal carcinoma (MESH:D000077274), liver cancer (MESH:D006528), esophageal cancer (MESH:D004938)
- **Chemicals:** BH3 (MESH:C006008), venetoclax (MESH:C579720), palbociclib (MESH:C500026), glutamate (MESH:D018698), erastin (MESH:C477224), LDH (-), Cisplatin (MESH:D002945), cetuximab (MESH:D000068818)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Nicotiana tabacum (American tobacco, species) [taxon 4097], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** rs3741384

## Full text

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## Figures

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## References

144 references — full list in the complete paper: https://tomesphere.com/paper/PMC12938140/full.md

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Source: https://tomesphere.com/paper/PMC12938140