# Targeted Removal of HCV E2 N2 N-Glycan Is Associated with Improved Immune Responses in Mice

**Authors:** Yuan-Qin Min, Yu-Shan Ren, Wen-Wen Zhang, Yi-Dan Zhou, Min Liu

PMC · DOI: 10.3390/biom16020183 · Biomolecules · 2026-01-24

## TL;DR

Removing a specific sugar from a hepatitis C virus protein improves immune responses in mice, suggesting a better vaccine strategy.

## Contribution

Selective removal of the N2 glycan on HCV E2 improves immune responses while preserving antigen integrity.

## Key findings

- N2 mutant (sE2-N2) showed higher anti-E2 titers and better inhibition of HCV genotype 1a.
- N2 immunization increased CD8+ T cell activity and tumor growth inhibition in mice.
- Therapeutic vaccination with sE2-N2 reduced HCV RNA and liver signals in infected mice.

## Abstract

Hepatitis C virus (HCV) still lacks a licensed vaccine. The envelope glycoprotein E2 is a key neutralizing target, but its dense N-glycan shield can hinder epitope exposure. In this study, we revisit E2 glycan editing and examine whether single-site deletion preserves antigen integrity while improving immune responses in mice under a DNA immunization setting. Using a secreted E2 ectodomain (sE2384–661), we generated five N to D mutants at conserved sites (N1, N2, N4, N6, and N11) and evaluated them in a unified DNA immunization model with identical CpG content and delivery conditions across groups. The N2 mutant (N423, sE2-N2) maintained expression, secretion, and ER localization; furthermore, in mice, it was associated with higher anti-E2 titers and greater inhibition of H77 (genotype 1a) HCVcc at the tested dilutions, with limited activity against Con1 (1b). Cellular analyses showed increased IFN-γ ELISPOT counts and higher frequencies of granzyme B+/perforin+ CD8+ T cells after N2 immunization, while IL-4 remained low. Functionally, N2 elicited stronger specific lysis of CT26-sE2 targets in vitro and slowed CT26-sE2 tumor growth in vivo. In HCV-infected ICR4R+ mice, therapeutic vaccination with sE2-N2 reduced blood HCV RNA and hepatic readouts compared with sE2. A monoclonal antibody isolated from sE2-N2-immunized mice (1C1) neutralized HCVcc in vitro and, after passive transfer, lowered viremia and liver signals in infected mice. Collectively, these findings indicate that selective removal of the N2 glycan preserves antigen properties and is associated with improved humoral and cellular immunity and measurable in vivo activity, supporting targeted glycan editing as a practical strategy to refine E2-based HCV vaccines.

## Linked entities

- **Proteins:** DBT (dihydrolipoamide branched chain transacylase E2), PRF1 (perforin 1), CD8A (CD8 subunit alpha), IFNG (interferon gamma), IL4 (interleukin 4)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Tnf (tumor necrosis factor) [NCBI Gene 21926] {aka DIF, TNF-a, TNF-alpha, TNFSF2, TNFalpha, Tnfa}, Psmb10 (proteasome (prosome, macropain) subunit, beta type 10) [NCBI Gene 19171] {aka Mecl-1, Mecl1}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, Ocln (occludin) [NCBI Gene 18260] {aka Ocl}, EREG (epiregulin) [NCBI Gene 2069] {aka EPR, ER, Ep}, Aicda (activation-induced cytidine deaminase) [NCBI Gene 11628] {aka Aid, Arp2}, Cldn1 (claudin 1) [NCBI Gene 12737], Tcf7 (transcription factor 7, T cell specific) [NCBI Gene 21414] {aka TCF-1, Tcf1}, Psmb8 (proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)) [NCBI Gene 16913] {aka Lmp-7, Lmp7}, Prdm1 (PR domain containing 1, with ZNF domain) [NCBI Gene 12142] {aka Blimp-1, Blimp1, PRDI-BF1, ZNFPR1A1, b2b1765Clo}, Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, Cxcl10 (C-X-C motif chemokine ligand 10) [NCBI Gene 15945] {aka C7, CRG-2, INP10, IP-10, IP10, Ifi10}, B2m (beta-2 microglobulin) [NCBI Gene 12010] {aka Ly-m11, beta2-m, beta2m}, Igh-V7183 (immunoglobulin heavy chain (V7183 family)) [NCBI Gene 16059] {aka B9-scFv, IgG, IgH, IgVH1(VSG), VH7183, VI24H}, Cd3e (CD3 antigen, epsilon polypeptide) [NCBI Gene 12501] {aka CD3, CD3epsilon, T3e}, Ighg2b (immunoglobulin heavy constant gamma 2B) [NCBI Gene 16016] {aka IgG2b, Igh-3, gamma2b}, Gzmb (granzyme B) [NCBI Gene 14939] {aka CCP-1/C11, CCP1, Ctla-1, Ctla1, GZB}, Irf1 (interferon regulatory factor 1) [NCBI Gene 16362] {aka Irf-1}, Ighg1 (immunoglobulin heavy constant gamma 1 (G1m marker)) [NCBI Gene 16017] {aka IgG1, Igh-4, VH7183}, Pax5 (paired box 5) [NCBI Gene 18507] {aka BSAP, EBB-1, KLP, Pax-5}, Il4 (interleukin 4) [NCBI Gene 16189] {aka BSF-1, Il-4}, Jchain (immunoglobulin joining chain) [NCBI Gene 16069] {aka 9530090F24Rik, Igj, Jch}, Bcl6 (B cell leukemia/lymphoma 6) [NCBI Gene 12053] {aka Bcl5}, Stat3 (signal transducer and activator of transcription 3) [NCBI Gene 20848] {aka 1110034C02Rik, Aprf}, HAL (histidine ammonia-lyase) [NCBI Gene 3034] {aka HIS, HSTD}, Cd81 (CD81 antigen) [NCBI Gene 12520] {aka Tapa-1, Tapa1, Tspan28}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, Scarb1 (scavenger receptor class B, member 1) [NCBI Gene 20778] {aka CD36, Cd36l1, Chohd1, Cla-1, Cla1, D5Ertd460e}, FUT2 (fucosyltransferase 2 (H blood group)) [NCBI Gene 2524] {aka B12QTL1, SE, SEC2, Se2, sej}, Ifna (interferon alpha complex region) [NCBI Gene 111654] {aka Ifa, Ifa8}, CANX (calnexin) [NCBI Gene 821] {aka CNX, IP90, P90}, POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}, Ifng (interferon gamma) [NCBI Gene 15978] {aka IFN-g, If2f, Ifg}, Fcgr2b (Fc receptor, IgG, low affinity IIb) [NCBI Gene 14130] {aka CD32, F630109E10Rik, Fc[g]RII, FcgRII, Fcgr2, Fcgr2a}, C1qa (complement component 1, q subcomponent, alpha polypeptide) [NCBI Gene 12259] {aka Adic, C1q}, Ighv1-9 (immunoglobulin heavy variable 1-9) [NCBI Gene 668478] {aka Gm16697, Igg2a}, Psmb9 (proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)) [NCBI Gene 16912] {aka Lmp-2, Lmp2, Ring12}, Tbx21 (T-box 21) [NCBI Gene 57765] {aka TBT1, Tbet, Tblym}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, H2-Ab1 (histocompatibility 2, class II antigen A, beta 1) [NCBI Gene 14961] {aka Abeta, H-2Ab, H2-Ab, I-Abeta, IAb, Ia-2}, Il6 (interleukin 6) [NCBI Gene 16193] {aka Il-6}, Xbp1 (X-box binding protein 1) [NCBI Gene 22433] {aka D11Ertd39e, TREB-5, TREB5, XBP-1}, IL4 (interleukin 4) [NCBI Gene 3565] {aka BCGF-1, BCGF1, BSF-1, BSF1, IL-4}
- **Diseases:** injury to (MESH:D014947), inflammatory (MESH:D007249), HCV Infection (MESH:D006526), HCVcc infection (MESH:D007239), Tumor (MESH:D009369), cytotoxic (MESH:D064420), hepatocellular injury (MESH:D056486), Viremia (MESH:D014766), liver infection (MESH:D017093), colon carcinoma (MESH:D003110)
- **Chemicals:** Hoechst (-), paraffin (MESH:D010232), T (MESH:D014316), H&amp;E (MESH:D006371), penicillin (MESH:D010406), hematoxylin (MESH:D006416), glycan (MESH:D011134), E2 (MESH:D004958), N (MESH:D009584), Triton X-100 (MESH:D017830), D-luciferin (MESH:C532924), streptomycin (MESH:D013307), CO2 (MESH:D002245), L-glutamine (MESH:D005973), paraformaldehyde (MESH:C003043), TRIzol (MESH:C411644), eosin (MESH:D004801), PBS (MESH:D007854), SDS (MESH:D012967), PVDF (MESH:C024865), Formalin (MESH:D005557)
- **Species:** Hepatitis C virus [taxon 11103], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606], Mycoplasma (genus) [taxon 2093], Halomonas sp. 77 (species) [taxon 1532354]
- **Mutations:** S01317012R, E2384-661WT, N to D
- **Cell lines:** ICR4R — Lithobates pipiens (Northern leopard frog), Spontaneously immortalized cell line (CVCL_4345), HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), 293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), H77 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_A5MS), Huh7.5.1 — Homo sapiens (Human), Adult hepatocellular carcinoma, Cancer cell line (CVCL_E049), CT26 — Mus musculus (Mouse), Mouse colon adenocarcinoma, Cancer cell line (CVCL_7254), CVCL_E049 — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_JT50), Con1 — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_RL17)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12937906/full.md

## References

38 references — full list in the complete paper: https://tomesphere.com/paper/PMC12937906/full.md

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Source: https://tomesphere.com/paper/PMC12937906