# Integrative Proteomic and Bioenergetic Profiling Reveals Diet- and Strain-Specific Mitochondrial Dysfunction in Cohen Diabetic Rat Hearts

**Authors:** Lauren Pavelich, Tasnim Arroum, Lucynda Pham, Dragana Komnenov, Paul M. Stemmer, Rachel Lax, Ann Saada, Sarah Weksler-Zangen, Maik Hüttemann

PMC · DOI: 10.3390/antiox15020248 · Antioxidants · 2026-02-13

## TL;DR

This study shows how diet and genetics together affect heart mitochondria in diabetic rats, leading to heart disease.

## Contribution

The study reveals diet- and strain-specific mitochondrial changes in diabetic rat hearts using proteomic and bioenergetic profiling.

## Key findings

- Cytochrome c oxidase subunits are downregulated in diabetic rat hearts.
- Mitochondrial respiration and ATP levels are impaired in sensitive strain rats.
- Diet-specific tyrosine phosphorylation of CcO subunit I indicates inflammation-driven inhibition.

## Abstract

Mitochondrial dysfunction contributes to diabetic cardiomyopathy, yet how genetic predisposition and diet interact to reshape cardiac metabolism in diabetic and prediabetic states remains unclear. The Cohen diabetic rat model, comprising diabetes-resistant (CDr) and diabetes-sensitive (CDs) strains, provides a unique platform to dissect this interplay. Here, we present an integrative global proteomic and bioenergetic characterization of cardiac tissue from CDr and CDs rats fed either a regular or a diabetogenic diet. Proteomic pathway mapping revealed downregulation of cytochrome c oxidase (CcO) subunits, strain-dependent rewiring of fatty-acid oxidation pathways, and CcO subunits switch from “heart-type” to “liver-type” isoforms in the sensitive strain. These changes were accompanied by impaired mitochondrial respiration, ATP depletion, and disruption of mitochondrial quality-control mechanisms, together with increased accumulation of tyrosine 304 phosphorylation of cytochrome c oxidase subunit I, indicative of inflammation-driven regulatory inhibition in a diet-specific manner. These findings establish an understanding of how genetic susceptibility and diet contribute to cardiac mitochondrial dysfunction in the Cohen diabetic rat model.

## Full-text entities

- **Genes:** Cp (ceruloplasmin) [NCBI Gene 24268] {aka CERP}, Sod1 (superoxide dismutase 1) [NCBI Gene 24786] {aka CuZnSOD}, Ccl2 (C-C motif chemokine ligand 2) [NCBI Gene 24770] {aka MCP-1, MCP1, Scya2, Sigje}, Acadl (acyl-CoA dehydrogenase, long chain) [NCBI Gene 25287] {aka ACOADA, LCAD}, Hp (haptoglobin) [NCBI Gene 24464] {aka Ba1-647}, Il10 (interleukin 10) [NCBI Gene 25325] {aka IL10X, If2a}, Coxfa4 (cytochrome c oxidase associated subunit FA4) [NCBI Gene 681024] {aka Ndufa4}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 24383] {aka BARS-38, Gapd}, Acadm (acyl-CoA dehydrogenase medium chain) [NCBI Gene 24158] {aka MCAD}, Kng2 (kininogen 2) [NCBI Gene 24903] {aka KINKG, KINKH, KINT1G, Kng, Kng1, Kng1_v1}, Tfam (transcription factor A, mitochondrial) [NCBI Gene 83474] {aka Mttfa}, Cxcl2 (C-X-C motif chemokine ligand 2) [NCBI Gene 114105] {aka Mip-2, Scyb2}, Il1b (interleukin 1 beta) [NCBI Gene 24494] {aka IL-1F2}, Tnf (tumor necrosis factor) [NCBI Gene 24835] {aka RATTNF, TNF-alpha, Tnfa}, Sod2 (superoxide dismutase 2) [NCBI Gene 24787] {aka MnSOD}, Sdha (succinate dehydrogenase complex flavoprotein subunit A) [NCBI Gene 157074], Ppargc1a (PPARG coactivator 1 alpha) [NCBI Gene 83516] {aka LRPGC1, PGC-1v, PGCvf, PGCvf-1, PGCvf1, Ppargc1}, ND1 (NADH dehydrogenase subunit 1) [NCBI Gene 26193], Eci1 (enoyl-CoA delta isomerase 1) [NCBI Gene 29740] {aka Dci, MECI}, Map1lc3a (microtubule-associated protein 1 light chain 3 alpha) [NCBI Gene 362245] {aka LC3-I, LC3-II, LC3A}, Dnm1l (dynamin 1-like) [NCBI Gene 114114] {aka DLP1, Dnml1, Drp1}, Khdrbs1 (KH RNA binding domain containing, signal transduction associated 1) [NCBI Gene 117268] {aka P62, Sam68}, Anxa3 (annexin A3) [NCBI Gene 25291] {aka Anx3, LC3, LRRGT00047}, Opa1 (OPA1, mitochondrial dynamin like GTPase) [NCBI Gene 171116], Ndufs3 (NADH:ubiquinone oxidoreductase core subunit S3) [NCBI Gene 295923], Actb (actin, beta) [NCBI Gene 81822] {aka Actx}, Alb (albumin) [NCBI Gene 24186] {aka Alb1, Albza}, Sqstm1 (sequestosome 1) [NCBI Gene 113894] {aka Osi, ZIP, ZIP3}, Ak1 (adenylate kinase 1) [NCBI Gene 24183] {aka Ak 1}, COX1 (cytochrome c oxidase subunit I) [NCBI Gene 26195] {aka COI}, Hpx (hemopexin) [NCBI Gene 58917] {aka Hpxn}, Hsd17b4 (hydroxysteroid (17-beta) dehydrogenase 4) [NCBI Gene 79244] {aka MFP-2, MPF-2}, Mfn2 (mitofusin 2) [NCBI Gene 64476] {aka HSG}, Acaa2 (acetyl-CoA acyltransferase 2) [NCBI Gene 170465], Cox7a1 (cytochrome c oxidase subunit 7A1) [NCBI Gene 12865] {aka COX7A, COX7AH, COX7AM}, Serpina3n (serpin family A member 3N) [NCBI Gene 24795] {aka CPi-26, SPI3, Spi-2.2, Spin2c, Spin3}, Cox7a2 (cytochrome c oxidase subunit 7A2) [NCBI Gene 12866] {aka COX7AL, Cox7a3, CoxVIIa-L}
- **Diseases:** metabolic dysregulation (MESH:D021081), metabolic disease (MESH:D008659), respiratory dysfunction (MESH:D012131), diastolic dysfunction (MESH:D018487), ischemic necrosis (MESH:D005271), ischemic (MESH:D002545), Diabetes (MESH:D003920), CDs (MESH:C536438), Mitochondrial Dysfunction (MESH:D028361), injury to (MESH:D014947), inflammation (MESH:D007249), fibrosis (MESH:D005355), overdose (MESH:D062787), glucose intolerance (MESH:D018149), Leigh syndrome (MESH:D007888), cardiac hypertrophy (MESH:D006332), cardiac remodeling (MESH:D020257), Cardiac dysfunction (MESH:D006331), CDr (MESH:D003924), HSD (MESH:C535468), heart failure (MESH:D006333), CIV (MESH:D030401), insulin resistance (MESH:D007333), cardiovascular complications (MESH:D002318), coagulation (MESH:D001778), dilated cardiomyopathy (MESH:D002311), Diabetic cardiomyopathy (MESH:D058065), hyperglycemic (MESH:D006944), atherosclerotic (MESH:D050197)
- **Chemicals:** glycine (MESH:D005998), Blood glucose (MESH:D001786), Tricine (MESH:C100184), ascorbate (MESH:D001205), SDS (MESH:D012967), copper (MESH:D003300), HCl (MESH:D006851), iron (MESH:D007501), water (MESH:D014867), ADP (MESH:D000244), Bis-Tris (MESH:C026272), carbon (MESH:D002244), digitonin (MESH:D004072), xylazine (MESH:D014991), nitrogen (MESH:D009584), bromophenol blue (MESH:D001978), butter (MESH:D002079), salt (MESH:D012492), sodium vanadate (MESH:D014638), O2 (MESH:D010100), metal (MESH:D008670), methanol (MESH:D000432), sodium deoxycholate (MESH:D003840), NaCl (MESH:D012965), glucose (MESH:D005947), ROS (MESH:D017382), KCl (MESH:D011189), Tween 20 (MESH:D011136), PVDF (MESH:C024865), Sucrose (MESH:D013395), lipid (MESH:D008055), I2 (MESH:D007455), coenzyme Q (MESH:D014451), adenylate (MESH:D000249), ATP (MESH:D000255), EGTA (MESH:D004533), propionate (MESH:D011422), 2-mercaptoethanol (MESH:D008623), Fatty acids (MESH:D005227), corn oil (MESH:D003314), heme (MESH:D006418), proton (MESH:D011522), glycerol (MESH:D005990), HEPES (MESH:D006531), CDr- (-)
- **Species:** Rattus (rat, genus) [taxon 10114], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116]
- **Cell lines:** P8849 — Atilax paludinosus (Marsh mongoose), Finite cell line (CVCL_6365)

## Full text

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## Figures

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## References

95 references — full list in the complete paper: https://tomesphere.com/paper/PMC12937826/full.md

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Source: https://tomesphere.com/paper/PMC12937826