# DERA-Catalyzed Chemoenzymatic Access to Nucleobase-Substituted Candidate Statin Precursors

**Authors:** Romina Fernández Varela, Eman Abdelraheem, Lautaro Giaimo, Luciano Cortés, Leticia Lafuente, Ana Laura Valino, Peter-Leon Hagedoorn, Ulf Hanefeld, Adolfo Iribarren, Elizabeth Lewkowicz

PMC · DOI: 10.3390/biom16020321 · Biomolecules · 2026-02-19

## TL;DR

Researchers developed a new method using an enzyme to create statin precursors with nucleobase substitutions, opening up possibilities for new drug candidates.

## Contribution

A novel chemoenzymatic approach using a DERA variant to synthesize nucleobase-substituted statin precursors is introduced.

## Key findings

- A C49M variant of PaDERA catalyzed aldol additions with nucleobase aldehydes to form lactols.
- Nucleobase-derived aldehydes were accepted in DERA-catalyzed reactions for the first time.
- The method provides structurally novel statin side-chain precursors for drug development.

## Abstract

Aldolases are powerful biocatalysts for the stereoselective formation of carbon–carbon bonds and are widely used in the synthesis of chiral intermediates for pharmaceutical applications. Among them, 2-deoxyribose-5-phosphate aldolase (DERA) has been extensively exploited for the preparation of the conserved side chain of statins. In this work, we report a novel chemoenzymatic approach for the synthesis of nucleobase-substituted lactol products as potential precursors of new statin analogues. A C49M variant of DERA from Pectobacterium atrosepticum (PaDERA C49M) was employed to catalyze sequential aldol additions using aldehyde-functionalized nucleobases as non-natural electrophilic substrates. The formation of nucleobase-containing lactols was confirmed, demonstrating for the first time the acceptance of nucleobase-derived aldehydes in DERA-catalyzed aldol reactions. This strategy provides access to structurally novel statin side-chain precursors and expands the synthetic potential of DERA toward the generation of new classes of bioactive compounds.

## Linked entities

- **Proteins:** DERA (deoxyribose-phosphate aldolase)
- **Chemicals:** statin (PubChem CID 54454), aldehyde (PubChem CID 6449839), lactol (PubChem CID 7140)
- **Species:** Pectobacterium atrosepticum (taxon 29471)

## Full-text entities

- **Diseases:** injury to (MESH:D014947), diabetes (MESH:D003920), muscle weakness (MESH:D018908), renal insufficiency (MESH:D051437), obesity (MESH:D009765), TDHP (MESH:D053632), deaths (MESH:D003643), Cardiovascular disease (MESH:D002318), hepatic damage (MESH:D056486)
- **Chemicals:** propanal (MESH:C005556), phosphate (MESH:D010710), formic acid (MESH:C030544), acid (MESH:D000143), eritadenine (MESH:C100029), 3H (MESH:D014316), methanol (MESH:D000432), adenosine (MESH:D000241), silica gel (MESH:D058428), mevalonate (MESH:D008798), methionine (MESH:D008715), aldol (MESH:C116609), thymine (MESH:D013941), C (MESH:D002244), acetal (MESH:D000080), acetonitrile (MESH:C032159), potassium phosphate (MESH:C013216), dichloromethane (MESH:D008752), nitrogen (MESH:D009584), benzaldehyde (MESH:C032175), Ni (MESH:D009532), Chloroacetaldehyde (MESH:C004656), CO (MESH:D002248), crotonaldehyde (MESH:C012796), Water (MESH:D014867), phospholipid (MESH:D010743), imidazole (MESH:C029899), cytosine (MESH:D003596), pyrimidine (MESH:C030986), Aldehydes (MESH:D000447), NaOH (MESH:D012972), 13C (MESH:C000615229), Mevastatin (MESH:C012258), cholesterol (MESH:D002784), kanamycin (MESH:D007612), ethanol (MESH:D000431), HCl (MESH:D006851), adenine (MESH:D000225), SDS (MESH:D012967), phenylacetaldehyde (MESH:C013192), 2-deoxyribose-5-phosphate (MESH:C058245), Atorvastatin (MESH:D000069059), silica (MESH:D012822), helium (MESH:D006371), HMG-CoA. (MESH:C008047), aluminum (MESH:D000535), K2CO3 (MESH:C037593), 6-Substituted-2,4,6-Trideoxy-D-Erythro-Hexapyranoses (-), ethyl acetate (MESH:C007650), chlorine (MESH:D002713), Amino acid (MESH:D000596), Pitavastatin (MESH:C108475), Sepharose (MESH:D012685), nucleoside (MESH:D009705), lactone (MESH:D007783), pyrrole (MESH:D011758), quinoline (MESH:C037219), H2SO4 (MESH:C033158), Rosuvastatin (MESH:D000068718), ethylether (MESH:D004986)
- **Species:** Escherichia coli (E. coli, species) [taxon 562], Pectobacterium atrosepticum (species) [taxon 29471], Thermotoga maritima (species) [taxon 2336], Pyrobaculum aerophilum (species) [taxon 13773], Escherichia coli BL21(DE3) (strain) [taxon 469008], Homo sapiens (human, species) [taxon 9606], Escherichia coli DH5[alpha] (strain) [taxon 668369], Staphylococcus aureus (species) [taxon 1280], Levilactobacillus brevis (species) [taxon 1580]
- **Mutations:** Ser238Asp, C47M, C49M, C at 10
- **Cell lines:** ATCC 47092 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), PaDERA — Mus musculus (Mouse), Hybridoma (CVCL_J623)

## Full text

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## Figures

15 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12937707/full.md

## References

60 references — full list in the complete paper: https://tomesphere.com/paper/PMC12937707/full.md

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Source: https://tomesphere.com/paper/PMC12937707