# Mitochondria in Renal Ischemia–Reperfusion Injury: From Mechanisms to Therapeutics

**Authors:** Yijun Pan, Jiefu Zhu

PMC · DOI: 10.3390/biomedicines14020310 · Biomedicines · 2026-01-29

## TL;DR

This paper explores how mitochondria contribute to kidney injury during ischemia and reperfusion, and reviews potential therapies targeting mitochondrial dysfunction.

## Contribution

The paper provides a comprehensive review of recent advances in understanding mitochondrial mechanisms in renal IRI and highlights mitochondria-targeted therapeutic strategies.

## Key findings

- Mitochondrial dysfunction during ischemia and reperfusion leads to ATP depletion, Ca2+ overload, and mtROS production.
- Therapeutic strategies targeting mitochondrial quality control and mtDAMP signaling are promising for treating AKI.
- Recent studies emphasize the role of mitochondrial bioenergetics and immune signaling in IRI-AKI pathogenesis.

## Abstract

Renal ischemia–reperfusion injury (IRI) is a leading trigger of acute kidney injury (AKI), a syndrome with high incidence and mortality worldwide. The kidney is among the most energy-demanding organs; its mitochondrial content is second only to the heart, rendering renal function highly contingent on mitochondrial integrity. Accumulating evidence places mitochondria at the center of IRI pathogenesis. During ischemia, ATP depletion, ionic disequilibrium, and Ca2+ overload set the stage for injury; upon reperfusion, a burst of mitochondrial reactive oxygen species (mtROS), collapse of the mitochondrial membrane potential (ΔΨm), aberrant opening of the mitochondrial permeability transition pore (mPTP), mitochondrial DNA (mtDNA) damage, and release of mitochondrial damage-associated molecular patterns (mtDAMPs) further amplify inflammation and drive regulated cell-death programs. In recent years, the centrality of mitochondrial bioenergetics, quality control, and immune signaling in IRI-AKI has been increasingly recognized. Building on advances from the past five years, this review synthesizes mechanistic insights into mitochondrial dysfunction in renal IRI and surveys mitochondria-targeted therapeutic strategies—including antioxidant defenses, reinforcement of mitochondrial quality control (biogenesis, dynamics, mitophagy), and modulation of mtDAMP sensing—with the aim of informing future translational efforts in AKI.

## Linked entities

- **Diseases:** acute kidney injury (MONDO:0002492), ischemia–reperfusion injury (MONDO:0005203)

## Full-text entities

- **Genes:** MFN1 (mitofusin 1) [NCBI Gene 55669] {aka hfzo1, hfzo2}, Dnase1 (deoxyribonuclease 1) [NCBI Gene 25633], Dnm1l (dynamin 1-like) [NCBI Gene 114114] {aka DLP1, Dnml1, Drp1}, OPA1 (OPA1 mitochondrial dynamin like GTPase) [NCBI Gene 4976] {aka BERHS, MGM1, MTDPS14, MTDPS14A, MTDPS14B, NPG}, Map1lc3a (microtubule-associated protein 1 light chain 3 alpha) [NCBI Gene 66734] {aka 1010001H21Rik, 4922501H04Rik, LC3, LC3a}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, PANX1 (pannexin 1) [NCBI Gene 24145] {aka MRS1, OOMD7, OZEMA7, PX1, UNQ2529}, FUNDC1 (FUN14 domain containing 1) [NCBI Gene 139341], MIEF2 (mitochondrial elongation factor 2) [NCBI Gene 125170] {aka COXPD49, D3B, MID49, SMCR7}, SIRT1 (sirtuin 1) [NCBI Gene 23411] {aka SIR2, SIR2L1, SIR2alpha}, IL18 (interleukin 18) [NCBI Gene 3606] {aka IGIF, IL-18, IL-1g, IL1F4}, NRF1 (nuclear respiratory factor 1) [NCBI Gene 4899] {aka ALPHA-PAL}, PARL (presenilin associated rhomboid like) [NCBI Gene 55486] {aka PRO2207, PSARL, PSARL1, PSENIP2, RHBDS1}, OMA1 (OMA1 zinc metallopeptidase) [NCBI Gene 115209] {aka 2010001O09Rik, MPRP-1, MPRP1, YKR087C, ZMPOMA1, peptidase}, Cgas (cyclic GMP-AMP synthase) [NCBI Gene 214763] {aka E330016A19Rik, Mb21d1}, Fundc1 (FUN14 domain containing 1) [NCBI Gene 72018] {aka 1500005J14Rik, 1810033P05Rik}, MTFP1 (mitochondrial fission process 1) [NCBI Gene 51537] {aka HSPC242, MTP18}, OGG1 (8-oxoguanine DNA glycosylase) [NCBI Gene 4968] {aka HMMH, HOGG1, MUTM, OGH1}, RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970] {aka AIF3BL3, CMCU, NFKB3, p65}, SIRT3 (sirtuin 3) [NCBI Gene 23410] {aka SIR2L3}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, MIEF1 (mitochondrial elongation factor 1) [NCBI Gene 54471] {aka D3A, HSU79252, MID51, OPA14, SMCR7L, dJ1104E15.3}, Smurf1 (SMAD specific E3 ubiquitin protein ligase 1) [NCBI Gene 75788] {aka 4930431E10Rik, mKIAA1625}, ND1 (NADH dehydrogenase subunit 1) [NCBI Gene 4535] {aka MTND1}, BNIP3 (BCL2 interacting protein 3) [NCBI Gene 664] {aka HABON, NIP3}, Tfeb (transcription factor EB) [NCBI Gene 21425] {aka Tcfeb, bHLHe35}, TLR9 (toll like receptor 9) [NCBI Gene 54106] {aka CD289}, P2RX1 (purinergic receptor P2X 1) [NCBI Gene 5023] {aka P2X1}, MYD88 (MYD88 innate immune signal transduction adaptor) [NCBI Gene 4615] {aka IMD68, MYD88D, WM1}, PRKAA2 (protein kinase AMP-activated catalytic subunit alpha 2) [NCBI Gene 5563] {aka AMPK, AMPK2, AMPKa2, PRKAA}, HAVCR1 (hepatitis A virus cellular receptor 1) [NCBI Gene 26762] {aka CD365, HAVCR, HAVCR-1, KIM-1, KIM1, TIM}, Sod2 (superoxide dismutase 2, mitochondrial) [NCBI Gene 20656] {aka MnSOD, Sod-2}, TFAM (transcription factor A, mitochondrial) [NCBI Gene 7019] {aka MTDPS15, MTTF1, MTTFA, TCF6, TCF6L1, TCF6L2}, CYCS (cytochrome c, somatic) [NCBI Gene 54205] {aka CYC, HCS, THC4}, MFF (mitochondrial fission factor) [NCBI Gene 56947] {aka C2orf33, EMPF2, GL004}, TFEB (transcription factor EB) [NCBI Gene 7942] {aka ALPHATFEB, BHLHE35, TCFEB}, PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 10891] {aka LEM6, PGC-1(alpha), PGC-1alpha, PGC-1v, PGC1, PGC1A}, ESRRA (estrogen related receptor alpha) [NCBI Gene 2101] {aka ERR1, ERRa, ERRalpha, ESRL1, NR3B1}, CASP1 (caspase 1) [NCBI Gene 834] {aka ICE, IL1BC, P45}, DNM1L (dynamin 1 like) [NCBI Gene 10059] {aka DLP1, DRP1, DVLP, DYMPLE, EMPF, EMPF1}, LCN2 (lipocalin 2) [NCBI Gene 3934] {aka 24p3, MSFI, NGAL, p25}, DNM2 (dynamin 2) [NCBI Gene 1785] {aka CMT2M, CMTDI1, CMTDIB, DI-CMTB, DYN2, DYNII}, CAT (catalase) [NCBI Gene 847], Nlrp3 (NLR family, pyrin domain containing 3) [NCBI Gene 216799] {aka AGTAVPRL, AII/AVP, Cias1, FCAS, FCU, MWS}, TBK1 (TANK binding kinase 1) [NCBI Gene 29110] {aka AIARV, FTDALS4, IIAE8, NAK, T2K}, YME1L1 (YME1 like 1 ATPase) [NCBI Gene 10730] {aka FTSH, MEG4, OPA11, PAMP, YME1L}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, MIR1323 (microRNA 1323) [NCBI Gene 100302255] {aka MIRN1323, hsa-mir-1323, mir-1323}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, FCGR3A (Fc gamma receptor IIIa) [NCBI Gene 2214] {aka CD16-II, CD16A, FCG3, FCGR3, FCRIIIA, FcGRIIIA}, Hif1a (hypoxia inducible factor 1, alpha subunit) [NCBI Gene 15251] {aka HIF-1-alpha, HIF1-alpha, HIF1alpha, MOP1, bHLHe78}, Sting1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 72512] {aka 2610307O08Rik, ERIS, MPYS, Mita, STING, STING-beta}, PINK1 (PTEN induced kinase 1) [NCBI Gene 65018] {aka BRPK, PARK6}, SOD1 (superoxide dismutase 1) [NCBI Gene 6647] {aka ALS, ALS1, HEL-S-44, IPOA, SOD, STAHP}, Bak1 (BCL2-antagonist/killer 1) [NCBI Gene 12018] {aka Bak, N-BAK1, N-Bak}, PYCARD (PYD and CARD domain containing) [NCBI Gene 29108] {aka ASC, CARD5, TMS, TMS-1, TMS1}, GABPB1 (GA binding protein transcription factor subunit beta 1) [NCBI Gene 2553] {aka BABPB2, E4TF1, E4TF1-47, E4TF1-53, E4TF1B, GABPB}, Bnip3 (BCL2/adenovirus E1B interacting protein 3) [NCBI Gene 12176] {aka Nip3}, NOX4 (NADPH oxidase 4) [NCBI Gene 50507] {aka KOX, KOX-1, RENOX}, Ppif (peptidylprolyl isomerase F) [NCBI Gene 282819] {aka CyP-D, CypD, PPIase}
- **Diseases:** Ischemia (MESH:D007511), diabetic kidney disease (MESH:D003928), renal neoplasms (MESH:D007680), hypertensive nephropathy (MESH:C563161), tissue injury (MESH:D017695), hypoxia (MESH:D000860), mitochondrial fragmentation (MESH:D012892), IMM (MESH:D015433), MQC (MESH:D007174), kidney disorders (MESH:D007674), pathologic injury (MESH:D005598), MQC) failure (MESH:C536209), AKI (MESH:D058186), renal and systemic injury (MESH:D051437), infection (MESH:D007239), ischemic (MESH:D002545), tubular injury (MESH:D000230), lysosomal dysfunction (MESH:D016464), mitochondrial disruption (MESH:D019958), toxicity (MESH:D064420), tissue dysfunction (MESH:D059226), chronic kidney diseases (MESH:D051436), injury (MESH:D014947), shock (MESH:D012769), inflammation (MESH:D007249), loss of (MESH:D016388), fibrosis (MESH:D005355), IRI (MESH:D015427), Mitochondrial Antioxidant Defense (MESH:D028361)
- **Chemicals:** NADH (MESH:D009243), resveratrol (MESH:D000077185), L-ascorbic acid (MESH:D001205), H+ (MESH:D006859), glucose (MESH:D005947), creatinine (MESH:D003404), P110 (MESH:D003565), Mdivi-1 (MESH:C000723896), calcium (MESH:D002118), FADH2 (MESH:C058805), ROS (MESH:D017382), roxadustat (MESH:C584543), ATP (MESH:D000255), phospholipid (MESH:D010743), cardiolipin (MESH:D002308), 18F-BCPP-BF (MESH:C588085), lipid (MESH:D008055), empagliflozin (MESH:C570240), coenzyme Q (MESH:D014451), MitoQ (MESH:C429014), formoterol (MESH:D000068759), cGAMP (MESH:C584311), NADPH (MESH:D009249), heme (MESH:D006418), lasmiditan (MESH:C554777), ADP (MESH:D000244), TCA (MESH:D014233), CoQ10 (MESH:C024989), fatty-acid (MESH:D005227), Ca2+ (-), cisplatin (MESH:D002945), GTP (MESH:D006160), succinate (MESH:D019802), curcumin (MESH:D003474), melatonin (MESH:D008550), molecular oxygen (MESH:D010100), CsA (MESH:D016572)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

163 references — full list in the complete paper: https://tomesphere.com/paper/PMC12937674/full.md

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Source: https://tomesphere.com/paper/PMC12937674