# Identification and Analysis of DUF506 Gene Family in Peanut (Arachis hypogaea)

**Authors:** Qing Song, Gideon Asare Aboagye, Ming Liu, Ying Lan, Minghong Hu, Yanbin Hong, Renfeng Wang, Miao Chen

PMC · DOI: 10.3390/biom16020270 · Biomolecules · 2026-02-09

## TL;DR

This study identifies and analyzes the DUF506 gene family in peanuts, revealing their potential roles in plant development and stress responses.

## Contribution

The study is the first to identify and characterize the DUF506 gene family in cultivated peanuts.

## Key findings

- 23 AhDUF506 genes were identified and grouped into 4 subfamilies across 15 peanut chromosomes.
- Seven AhDUF506 genes showed significantly higher expression in flowers compared to other tissues.
- All AhDUF506 genes were up-regulated in roots under abiotic stress conditions.

## Abstract

The Domain of Unknown Function 506 (DUF506) family, part of the PD-(D/E)XK nuclease superfamily, has been shown to play a vital role in plant development and responses to abiotic stresses. However, the function of the DUF506 family in cultivated peanuts remains unknown. This study identified 23 AhDUF506 genes using bioinformatics approaches; these genes are spread across 15 chromosomes and grouped into 4 subfamilies. Additionally, by analyzing gene structure, upstream cis-acting elements, and transcriptional expression changes of AhDUF506 genes in different tissues and under various stress conditions, their expression levels and response mechanisms to abiotic stresses were examined. In mature tissues, the expression levels of seven AhDUF506 genes in flowers were significantly higher than those in other tissues. Under abiotic stress, their expression levels were all up-regulated in the roots of peanut plant seedlings. These findings provide an important foundation for a deeper understanding of the molecular characteristics of the DUF506 family in Arachis hypogaea (peanut), supporting future research on the functional characterization of its genes.

## Linked entities

- **Species:** Arachis hypogaea (taxon 3818)

## Full-text entities

- **Genes:** AT1G12030 (phosphoenolpyruvate carboxylase, putative (DUF506)) [NCBI Gene 837755] {aka F12F1.10, F12F1_10}, AT2G39650 (cruciferin (DUF506)) [NCBI Gene 818548] {aka F12L6.31, F12L6_31}
- **Diseases:** injury to (MESH:D014947), phosphorus (MESH:D010760)
- **Chemicals:** Polysaccharide (MESH:D011134), nitrogen (MESH:D009584), HClO (MESH:D006997), NaCl (MESH:D012965), ABA (MESH:D000040), salt (MESH:D012492), phosphorus (MESH:D010758), water (MESH:D014867), iron (MESH:D007501), essential oils (MESH:D009822), aluminum (MESH:D000535), Hoagland (-), reactive oxygen species (MESH:D017382)
- **Species:** Glycine max (soybean, species) [taxon 3847], Malus domestica (apple, species) [taxon 3750], Arachis hypogaea (goober, species) [taxon 3818], Brassica oleracea (wild cabbage, species) [taxon 3712], Arachis duranensis (species) [taxon 130453], Homo sapiens (human, species) [taxon 9606], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Arachis cardenasii (species) [taxon 51121], Medicago truncatula (barrel medic, species) [taxon 3880], Oryza sativa (Asian cultivated rice, species) [taxon 4530]

## Full text

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## Figures

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## References

52 references — full list in the complete paper: https://tomesphere.com/paper/PMC12937607/full.md

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Source: https://tomesphere.com/paper/PMC12937607