# CHMP7/ESCRT-III Is Localized at the Nuclear Envelope of Cortical Neurons and Required for Expression of Activity-Regulated Genes

**Authors:** Paola Chietera, Heidrun Berger, Nico Wahl, Mujahid Ali, Galina Apostolova

PMC · DOI: 10.3390/biology15040308 · Biology · 2026-02-10

## TL;DR

This study shows that a protein complex at the nuclear envelope helps regulate gene expression in response to neuronal activity, which is important for brain function and could be relevant to neurological disorders.

## Contribution

The study identifies CHMP7/ESCRT-III as a novel component of a nuclear tether involved in activity-dependent gene regulation in cortical neurons.

## Key findings

- Increased neuronal activity correlates with accumulation of CHMP7 and CHMP4B at the nuclear envelope.
- Reducing CHMP7 levels decreases expression of genes related to neuronal activity and synaptic communication.
- Transcriptome changes in Chmp7 knockdown models mirror those in Satb2 and Lemd2 loss-of-function models.

## Abstract

Neurons in the brain constantly change their activity in response to experience, and this activity must be translated into changes in gene expression to support learning, memory, and normal brain function. How this communication between neuronal activity and the cell nucleus is organized is still not fully understood. In this study, we investigated how proteins at the boundary of the nucleus help regulate activity-dependent gene expression in cortical neurons. We focused on proteins that form a physical connection between DNA and the nuclear envelope, the membrane that surrounds the nucleus. We found that increased neuronal activity is associated with the accumulation of specific membrane-remodeling proteins at the nuclear envelope. Reducing the levels of one of these proteins led to widespread decreases in genes involved in neuronal activity and synaptic communication. Importantly, these gene expression changes closely matched those seen when other components of the same nuclear scaffold were disrupted. Our findings suggest that a dynamic protein assembly at the nuclear envelope helps coordinate neuronal activity with gene regulation. Understanding this mechanism provides new insight into how brain cells adapt to activity and may be relevant for neurological disorders in which gene regulation is impaired.

The epigenome and nuclear architectural mechanisms that regulate neuronal activity-induced transcriptional responses in cortical neurons remain incompletely understood. Previously, we have shown that the chromatin organizer SATB2 and the inner nuclear membrane protein LEMD2 form a chromatin tether at the nuclear lamina, and that activity-induced transcription is impaired in both Satb2 and Lemd2 loss-of-function models. Interaction of SATB2 and LEMD2 with subunits of the ESCRT-III complex indicates that the ESCRT-III complex could serve as an activity-dependent, dynamic component of this tether. Here, we study the activity-dependent subcellular localization and function of the ESCRT-III components CHMP7 and CHMP4B in primary cortical neurons. We find that increased neuronal activity correlates with the accumulation of co-localized CHMP7 and CHMP4B foci at the nuclear envelope. shRNA-mediated Chmp7 knockdown causes a reduction in the expression of activity-regulated genes and genes with highly specialized functions in synaptic organization and trans-synaptic signaling. Furthermore, the observed similarity in the global transcriptome responses in Satb2, Lemd2, and Chmp7 loss-of-function models points toward a previously unrecognized role of the SATB2–LEMD2–CHMP7 tether in linking chromatin architecture and nuclear envelope plasticity to activity-dependent gene regulation.

## Linked entities

- **Genes:** CHMP7 (charged multivesicular body protein 7) [NCBI Gene 91782], CHMP4B (charged multivesicular body protein 4B) [NCBI Gene 128866], SATB2 (SATB homeobox 2) [NCBI Gene 23314], LEMD2 (LEM domain nuclear envelope protein 2) [NCBI Gene 221496], SATB2 (SATB homeobox 2) [NCBI Gene 23314], LEMD2 (LEM domain nuclear envelope protein 2) [NCBI Gene 221496]
- **Proteins:** CHMP7 (charged multivesicular body protein 7), CHMP4B (charged multivesicular body protein 4B), SATB2 (SATB homeobox 2), LEMD2 (LEM domain nuclear envelope protein 2), shrb (shrub)

## Full-text entities

- **Genes:** Homer2 (homer scaffolding protein 2) [NCBI Gene 26557] {aka 9330120H11Rik, CPD, Vesl-2}, Sv2c (synaptic vesicle glycoprotein 2c) [NCBI Gene 75209] {aka 4930527L09Rik}, Unc13c (unc-13 homolog C) [NCBI Gene 208898] {aka 1500037O19Rik, D9Ertd414e, Munc13-3, Unc13h3}, Mctp2 (multiple C2 domains, transmembrane 2) [NCBI Gene 244049] {aka Gm489}, Alk (anaplastic lymphoma kinase) [NCBI Gene 11682] {aka CD246, Tcrz}, Chmp4b (charged multivesicular body protein 4B) [NCBI Gene 75608] {aka 2010012F05Rik, Snf7-2}, Homer1 (homer scaffolding protein 1) [NCBI Gene 26556] {aka PSD-Zip45, SYN47, Ves-1, homer-1, vesl-1}, Dlgap1 (DLG associated protein 1) [NCBI Gene 224997] {aka 4933422O14Rik, 9630002F18, D17Bwg0511e, GKAP/SAPAP, GKPA/SAPAP, Gkap}, Nptx2 (neuronal pentraxin 2) [NCBI Gene 53324] {aka Narp, np2}, Lmnb1 (lamin B1) [NCBI Gene 16906], Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, SATB2 (SATB homeobox 2) [NCBI Gene 23314] {aka C2DELq32q33, DEL2Q32Q33, GLSS}, Chmp7 (charged multivesicular body protein 7) [NCBI Gene 105513] {aka 4930596K11Rik, 6330407G04Rik}, CHMP4B (charged multivesicular body protein 4B) [NCBI Gene 128866] {aka C20orf178, CHMP4A, CTPP3, CTRCT31, SNF7, SNF7-2}, CHMP7 (charged multivesicular body protein 7) [NCBI Gene 91782], Prkcg (protein kinase C, gamma) [NCBI Gene 18752] {aka PKCgamma, Pkcc, Prkcc}, Gphn (gephyrin) [NCBI Gene 268566] {aka 5730552E08Rik, C230040D23, GPH, GPHRYN, geph}, Stx1a (syntaxin 1A (brain)) [NCBI Gene 20907] {aka HPC-1}, Satb2 (special AT-rich sequence binding protein 2) [NCBI Gene 212712] {aka BAP002, mKIAA1034}, Paqr5 (progestin and adipoQ receptor family member V) [NCBI Gene 74090] {aka 0610010I15Rik, mPRg}, LEMD2 (LEM domain nuclear envelope protein 2) [NCBI Gene 221496] {aka CTRCT42, LEM2, MARUPS, NET25, dJ482C21.1}, Plcb1 (phospholipase C, beta 1) [NCBI Gene 18795] {aka 3110043I21Rik, Plcb, mKIAA0581}, Erc2 (ELKS/RAB6-interacting/CAST family member 2) [NCBI Gene 238988] {aka CAST, CAST1, CAST1/ERC2, D14Ertd171e, ELKS2alpha}, RIC8B (RIC8 guanine nucleotide exchange factor B) [NCBI Gene 55188] {aka RIC8, hSyn}, Lemd2 (LEM domain containing 2) [NCBI Gene 224640] {aka Lem2, NET25}, Unc13b (unc-13 homolog B) [NCBI Gene 22249] {aka Munc13-1, Munc13-2, Unc13a, Unc13h1, Unc13h2}, Rims1 (regulating synaptic membrane exocytosis 1) [NCBI Gene 116837] {aka C030033M19Rik, RIM1, RIM1a, RIM1alpha, Rab3ip1, Rim}, Fos (Fos proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 14281] {aka D12Rfj1, c-fos, cFos}, chmp7 (charged multivesicular body protein 7) [NCBI Gene 393754] {aka zgc:73300, zgc:77047}, Bdnf (brain derived neurotrophic factor) [NCBI Gene 12064], DNASE1 (deoxyribonuclease 1) [NCBI Gene 403413]
- **Diseases:** neurodevelopmental (MESH:D008607), ADHD (MESH:D001289), nuclear pore complex (MESH:C565375), ALS (MESH:D008113), injury to (MESH:D014947), herpesvirus infection (MESH:D006566), NPC (MESH:D052556), hyperactivity (MESH:D006948), neurological disorders (MESH:D009461)
- **Chemicals:** Penicillin (MESH:D010406), HEPES (MESH:D006531), 1XB27 (-), NaHCO3 (MESH:D017693), Alexa Fluor 488 (MESH:C000711379), MgSO4 (MESH:D008278), NBQX (MESH:C062865), chloroform (MESH:D002725), paraformaldehyde (MESH:C003043), CO2 (MESH:D002245), cytosine arabinoside (MESH:D003561), SYBR Green (MESH:C098022), poly(A) (MESH:D011061), D-Glucose (MESH:D005947), DAPI (MESH:C007293), PVDF (MESH:C024865), IN (MESH:D007204), BIC (MESH:D001640), PBS (MESH:D007854), Tween 20 (MESH:D011136), TBS-T (MESH:C027647), Dox (MESH:D004318), Streptomycin (MESH:D013307), Triton-X (MESH:D017830), TRIzol (MESH:C411644), TBS (MESH:D013725), GlutaMAX (MESH:C054122), ethanol (MESH:D000431), cholesterol (MESH:D002784), Alexa Fluor 555 (MESH:C000608607), CaCl2 (MESH:D002122)
- **Species:** Danio rerio (leopard danio, species) [taxon 7955], Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** K929.1 — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0462)

## Full text

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## Figures

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## References

38 references — full list in the complete paper: https://tomesphere.com/paper/PMC12937594/full.md

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Source: https://tomesphere.com/paper/PMC12937594