# Discovery of Novel Derivatives of Catechin Gallate with Antimycobacterial Activity from Kirkia wilmsii Engl. Extracts

**Authors:** Nenekazi Masikantsi, Rendani Mbau, Nuhu Tukur, Peter Masoko, Gabriel Mashabela

PMC · DOI: 10.3390/antibiotics15020141 · Antibiotics · 2026-02-01

## TL;DR

This study identifies new antimycobacterial compounds in Kirkia wilmsii plant extracts that could help combat drug-resistant tuberculosis.

## Contribution

The first report of the structure and antimycobacterial activity of catechin 3′- and 4′-digallate, including acyl migration in their formation.

## Key findings

- Catechin 3′- and 4′-digallate showed MIC of 250 µg/mL against Mycobacterium smegmatis and M. tuberculosis H37Rv.
- Structural isomers of catechin monogallate and digallate were identified using mass spectrometry and NMR.
- Fractionation and purification methods revealed bioactive compounds with increased antimycobacterial activity.

## Abstract

Background/Objectives: The increase in incidences of multidrug resistance exacerbates tuberculosis-related global health challenges and underscores a call for more efforts for development of new antitubercular drugs, including the use of medicinal plants, especially those that have been used for generations by traditional healers. Despite reports of antimicrobial activity and chemical profiling of Kirkia wilmsii (K. wilmsii) extracts, chemical structures of the bioactive agents have not been elucidated. Here, we used a combination of bioactivity-guided fractionation, mass spectrometry, and nuclear magnetic resonance to purify and elucidate the chemical structure of antimycobacterial agents contained in leaf and twig extracts for K. wilmsii. Results: After overnight extraction with acetone and 90 g of dry twigs and leaves produced 5.38 g (6%) and 4.56 g (5%) of product, which displayed moderate antimycobacterial activity of 0.5 and 1 mg/mL, respectively. The antimycobacterial activity was increased six- and three-fold, respectively, after the crude extracts were subjected to solvent–solvent partitioning. Due to many bioactive fractions being obtained after silica gel chromatography purification, fraction 5 of twig extract was prioritized for further purification due to its low minimum inhibitory concentration (MIC) (0.25 mg/mL) and cytotoxicity (20%, in THP-1 cells). Sequential purification of the fraction 5 (twig extract) extracts through the C18 cartridge and high-performance liquid chromatography (HPLC) produced four fractions, which were subjected to structural elucidation. The high-resolution mass spectrometric analyses revealed that the first two eluting peaks had the same mass ion of 441.0822 m/z (M − H−), which corresponded to catechin monogallate, and so were the last two eluting peaks, which had a mass ion of 539.0932 m/z (M − H−), corresponding to catechin digallate. Further analyses by 1H, 13C, and 2D NMR confirmed the chemical structures of compounds eluting in the first two peaks on HPLC as structural isomers of catechin 3′-monogallate and catechin 4′-monogallate (MIC not determined). Similarly, compounds eluting in the last two peaks were identified as structural isomers catechin 3′-digallate and catechin 4′-digallate, with an MIC of 250 µg/mL against Mycobacterium smegmatis and Mycobacterium tuberculosis H37Rv and an MBC of 500 μg/mL against M. smegmatis. Conclusions: To the best of our knowledge, this study is the first to report the structure of catechin 3′- and 4′-digallate, their antimycobacterial activity, and the existence of acyl migration involving galloyl 3′ and 4′-hydroxyl groups of catechin ring B.

## Linked entities

- **Chemicals:** catechin gallate (PubChem CID 5276454), acetone (PubChem CID 180), doxorubicin (PubChem CID 31703)
- **Diseases:** tuberculosis (MONDO:0018076)
- **Species:** Kirkia wilmsii (taxon 43703), Mycobacterium tuberculosis H37Rv (taxon 83332)

## Full-text entities

- **Diseases:** nasal congestion (MESH:D009668), Cytotoxic (MESH:D064420), arthritis (MESH:D001168), hypertension (MESH:D006973), deaths (MESH:D003643), malaria (MESH:D008288), TB (MESH:D014376), diabetes (MESH:D003920), lung disease (MESH:D008171), asthma (MESH:D001249), injury to (MESH:D014947), ringworm (MESH:D014005), diarrhea (MESH:D003967)
- **Chemicals:** carbohydrates (MESH:D002241), acetone (MESH:D000096), 2H (MESH:D003903), celite (MESH:D007692), 7H10 (-), ethyl acetate (MESH:C007650), aluminum (MESH:D000535), Silica (MESH:D012822), hexane (MESH:D006586), ellagic acid (MESH:D004610), caffeic acid (MESH:C040048), H (MESH:D006859), oleic acid (MESH:D019301), Tween-80 (MESH:D011136), dextrose (MESH:D005947), flavonoid (MESH:D005419), DMSO (MESH:D004121), steroids (MESH:D013256), Alamar Blue (MESH:C005843), (+-)-catechin gallates (MESH:C417939), PMA (MESH:D013755), C (MESH:D002244), Acetonitrile (MESH:C032159), agar (MESH:D000362), trypan blue (MESH:D014343), methanol (MESH:D000432), Silica gel (MESH:D058428), oxygen (MESH:D010100), Gallic acid (MESH:D005707), formic acid (MESH:C030544), 13C (MESH:C000615229), digallic acid (MESH:C067648), ethanol (MESH:D000431), carotenoids (MESH:D002338), water (MESH:D014867), (+-)-epicatechin (MESH:D002392), petroleum ether (MESH:C004544), F4 (MESH:C006011), phenolic acids (MESH:C017616)
- **Species:** Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Mycobacterium tuberculosis (species) [taxon 1773], Homo sapiens (human, species) [taxon 9606], Kirkia (genus) [taxon 43702], Mycolicibacterium smegmatis MC2 155 (strain) [taxon 246196], Kirkia wilmsii (species) [taxon 43703], Mycobacterium tuberculosis H37Rv (strain) [taxon 83332], Mycolicibacterium smegmatis (species) [taxon 1772], Escherichia coli (E. coli, species) [taxon 562], Mycobacterium tuberculosis complex (species group) [taxon 77643]
- **Cell lines:** THP-1 — Homo sapiens (Human), Childhood acute monocytic leukemia, Cancer cell line (CVCL_0006), ATCC TIB-202 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023)

## Full text

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## Figures

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## References

39 references — full list in the complete paper: https://tomesphere.com/paper/PMC12937249/full.md

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Source: https://tomesphere.com/paper/PMC12937249