# Assessment of the Incidence of Vibrio spp. in Shrimp Farms Relative to Water Parameters and Their Molecular Detection in the Southwest Coastal Region of Bangladesh

**Authors:** M. Sohidullah, Bidyut Matubber, Md. Hamidur Rahman, Abu Sayeed, Sadia Rahman, Linta Yesmin, Md. Jannat Hossain, Md. Imran Chowdhury, Muhammad Ashiqul Alam

PMC · DOI: 10.1002/mbo3.70256 · MicrobiologyOpen · 2026-02-26

## TL;DR

This study examines the presence of Vibrio bacteria in shrimp farms in Bangladesh and their relation to water conditions, finding high levels in shrimp during the rainy season.

## Contribution

The study provides new insights into the seasonal and environmental factors influencing Vibrio spp. in shrimp farms using molecular detection methods.

## Key findings

- Shrimp had the highest Vibrio spp. count during the rainy season.
- 48.02% of isolates were Vibrio cholerae and 51.97% were Vibrio parahaemolyticus.
- Ammonium was the only water parameter significantly related to Vibrio spp. in the winter season.

## Abstract

In aquatic ecosystems, the incidence of Vibrio spp. is rising continually due to changes in water parameters. The study was undertaken to assess the incidence of Vibrio spp. in shrimp farms relative to water parameters and to perform their molecular detection. Maintaining three replications of each sample, overall, 360 shrimp, 360 water, and 360 sediments were randomly collected from the experimental units of 30 ponds in Khulna and Satkhira districts in each of the rainy and winter seasons. Temperature, ammonium, nitrite, pH, iron, and salinity were measured from water samples. The groEL gene of Vibrio cholerae, and toxR, trh, and tdh genes of Vibrio parahaemolyticus were identified through real‐time polymerase chain reaction assay. Shrimp showed the highest mean total Vibrio spp. count (9.39 ± 0.34 log CFU/mL) in the rainy season. In the rainy season, shrimp represented 42.5%, water 17.5%, and sediment 19.16% Vibrio spp., whereas in the winter season, these were 38.33%, 14.16%, and 15.83%, respectively. Temperature and pH were at the highest average levels in the rainy and winter seasons, respectively. There was no significant relation between the incidence of Vibrio spp. and water parameters, except ammonium in the winter season. Here, 48.02% (85/177) isolates were positive for V. cholerae, 51.97% (92/177) for V. parahaemolyticus, 15.21% (14/92) for the trh gene, and 6.52% (6/92) for the tdh gene. None of the relations between water parameters and trh‐positive V. parahaemolyticus was significant, except pH in the rainy season. The occurrence of Vibrio spp. in shrimp farms should be a burning issue for sustainable production.

There was no significant relation between the incidence of Vibrio spp. and water parameters, except ammonium in the winter season. In this study, 48.02% (85/177) isolates were positive for Vibrio cholerae, 51.97% (92/177) for Vibrio parahaemolyticus, 15.21% (14/92) for trh gene, and 6.52% (6/92) for tdh gene.

## Linked entities

- **Genes:** HSPD1 (heat shock protein family D (Hsp60) member 1) [NCBI Gene 3329], toxR (transcriptional regulator ToxR) [NCBI Gene 880684], TRH (thyrotropin releasing hormone) [NCBI Gene 7200], TDH (L-threonine dehydrogenase (pseudogene)) [NCBI Gene 157739]
- **Chemicals:** ammonium (PubChem CID 223), nitrite (PubChem CID 946), iron (PubChem CID 23925)
- **Species:** Vibrio cholerae (taxon 666), Vibrio parahaemolyticus (taxon 670)

## Full-text entities

- **Diseases:** cytotoxic (MESH:D064420), acute gastroenteritis (MESH:D005759), Vibriosis (MESH:D014735), septicemia (MESH:D018805), hemolysis (MESH:D006461), cholera (MESH:D002771)
- **Chemicals:** agar (MESH:D000362), carbon (MESH:D002244), Ammonium (MESH:D064751), NO2 (MESH:D009585), Nitrite (MESH:D009573), nitrogen (MESH:D009584), salt (MESH:D012492), phosphate (MESH:D010710), nitrate (MESH:D009566), mercury (MESH:D008628), oxygen (MESH:D010100), NH3 (MESH:D000641), HI 3834-0 (-), NaCl (MESH:D012965), bile salts (MESH:D001647), Fe2O3 (MESH:C000499), NO3 - (MESH:C038619), Iron (MESH:D007501), sucrose (MESH:D013395), Water (MESH:D014867)
- **Species:** Vibrio fluvialis (species) [taxon 676], Homo sapiens (human, species) [taxon 9606], Vibrio cholerae (species) [taxon 666], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Vibrio mimicus (species) [taxon 674], Vibrio (genus) [taxon 662], Vibrio cholerae O1 (serogroup) [taxon 127906], Ostreidae (oysters, family) [taxon 6563], Vibrio alginolyticus (species) [taxon 663], Vibrio furnissii (species) [taxon 29494], Penaeus vannamei (Pacific white shrimp, species) [taxon 6689], Vibrio parahaemolyticus (species) [taxon 670]
- **Mutations:** C-35 C, C-4 C, C-50 C, C-32 C

## Full text

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## Figures

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## References

77 references — full list in the complete paper: https://tomesphere.com/paper/PMC12936711/full.md

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Source: https://tomesphere.com/paper/PMC12936711