# Characterizing the salivary RNA landscape to identify potential diagnostic, prognostic, and follow‐up biomarkers for breast cancer

**Authors:** Nicholas Rajan, Irina Primac, Emre Etlioglu, Laurens Debruyne, Ann Janssen, Magy Sallam, Kevin Tabury, Roel Quintens, Wiebren Tjalma, Mohammed Abderrafi Benotmane

PMC · DOI: 10.1002/1878-0261.70101 · Molecular Oncology · 2025-09-01

## TL;DR

This study shows that RNA in saliva can help diagnose, predict outcomes, and monitor breast cancer noninvasively.

## Contribution

The study identifies novel salivary RNA signatures for breast cancer diagnosis, subtype classification, and prognosis.

## Key findings

- Salivary RNA signatures distinguish breast cancer patients from healthy individuals.
- RNA profiles correlate with histological types and hormone receptor subtypes of breast cancer.
- Salivary transcripts reflect treatment response and are linked to survival outcomes.

## Abstract

Breast cancer (BC) diagnostics and prognostics traditionally rely on invasive tissue biopsies, presenting limitations for large‐scale screening and continuous patient monitoring. Salivary biomarkers have recently emerged as a compelling noninvasive and accessible alternative, offering significant potential for population‐level screening and long‐term monitoring of BC. In this study, we conducted a comprehensive salivary transcriptomic profiling of BC patients using high‐throughput RNA sequencing. Our analysis captured a wide spectrum of RNA species, including mRNAs, lncRNAs, miRNAs, and snRNAs, highlighting their collective contributions in the molecular landscape of BC patient saliva. We identified robust human gene expression signatures that distinguish BC patients from healthy individuals. Importantly, we discovered RNA profiles that were differentially expressed relative to control samples, enabling the discrimination of noninvasive, invasive, and mixed histological types, as well as hormone receptor‐positive molecular subtypes. These salivary markers showed substantial concordance with established tumor gene expression datasets, strengthening their potential relevance in clinical stratification. Furthermore, we identified subsets of salivary genes associated with nodal involvement and others linked to poor survival outcomes, highlighting their potential as prognostic indicators. A prospective follow‐up analysis revealed a decline in the expression of several cancer‐related salivary transcripts 1‐year posttreatment, indicating that salivary RNA might also reflect treatment response over time. This study establishes a proof‐of‐concept for salivary RNA biomarkers as a versatile, accessible, and robust tool for BC diagnosis, prognosis, and follow‐up, paving the way for innovative biomarker‐driven strategies in oncology.

This study explores salivary RNA for breast cancer (BC) diagnosis, prognosis, and follow‐up. High‐throughput RNA sequencing identified distinct salivary RNA signatures, including novel transcripts, that differentiate BC from healthy controls, characterize histological and molecular subtypes, and indicate lymph node involvement. Key transcripts also show prognostic value and dynamic changes posttreatment, emphasizing salivary RNA as a promising noninvasive biomarker tool.

## Linked entities

- **Diseases:** breast cancer (MONDO:0004989)

## Full-text entities

- **Diseases:** cancer (MESH:D009369), BC (MESH:D001943), nodal (MESH:D013611)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12936433/full.md

## References

93 references — full list in the complete paper: https://tomesphere.com/paper/PMC12936433/full.md

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Source: https://tomesphere.com/paper/PMC12936433