# WASHC3 knockout disrupts mitochondrial protein homeostasis and energy metabolism in cardiomyocytes

**Authors:** Sujin Kim, Deung-Dae Park, Amelia Glazier, Wolfgang Rottbauer, Steffen Just

PMC · DOI: 10.3389/fcvm.2026.1682381 · Frontiers in Cardiovascular Medicine · 2026-02-12

## TL;DR

This study shows that WASHC3 is important for heart cell energy and mitochondrial health, linking its absence to both neurological and cardiac issues.

## Contribution

The novel role of WASHC3 in cardiac mitochondrial protein homeostasis and bioenergetics is identified.

## Key findings

- WASHC3 knockout leads to downregulation of mitochondrial proteins and impaired respiration in cardiomyocytes.
- Loss of WASHC3 causes progressive heart degeneration in aged zebrafish.
- Findings connect WASHC3 to both neuromuscular and cardiac mitochondrial dysfunction.

## Abstract

The WASH complex regulates endosomal actin dynamics and vesicular trafficking and is essential for neuronal integrity and motor function. Although variants in WASHC4, WASHC5, and WASHC3 are linked to neurodevelopmental abnormalities, the role of WASHC3 beyond the nervous system, particularly in cardiac mitochondrial regulation, remains unclear.

We modeled WASHC3 loss of function in zebrafish and human cardiomyocytes. Washc3 was suppressed in zebrafish embryos by antisense oligonucleotide-mediated knockdown, and a stable Washc3 knockout line was generated using CRISPR/Cas9. Washc3-deficient zebrafish hearts were analyzed by quantitative LC-MS/MS proteomics with GO/KEGG enrichment and transcript-level assays. Mitochondrial bioenergetics was assessed by Seahorse XF assays in primary zebrafish cardiomyocytes and in human AC16 cardiomyocytes following AAV-shRNA-mediated WASHC3 knockdown.

Washc3 knockdown embryos exhibited neuromuscular degeneration, impaired locomotion, and early cardiac dysfunction. In contrast, Washc3 knockout zebrafish showed normal early development but developed progressive pericardial degeneration and epicardial remodeling in aged animals. Cardiac proteomics revealed downregulation of mitochondrial proteins, particularly oxidative phosphorylation components, supported by pathway enrichment and concordant transcript-level findings. Mitochondrial respiration was significantly impaired in both Washc3-deficient zebrafish cardiomyocytes and WASHC3-depleted human AC16 cardiomyocytes.

These findings identify a previously unrecognized role for WASHC3 in maintaining cardiac mitochondrial protein homeostasis and bioenergetic function and provide a framework linking neuromuscular and cardiac phenotypes to impaired mitochondrial bioenergetics in energy-demanding tissues.

## Linked entities

- **Genes:** WASHC3 (WASH complex subunit 3) [NCBI Gene 51019], WASHC4 (WASH complex subunit 4) [NCBI Gene 23325], WASHC5 (WASH complex subunit 5) [NCBI Gene 9897]
- **Proteins:** WASHC3 (WASH complex subunit 3)
- **Species:** Danio rerio (taxon 7955), Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** mnx1 (motor neuron and pancreas homeobox 1) [NCBI Gene 405399] {aka hlxb9, zgc:112174}, WAS (WASP actin nucleation promoting factor) [NCBI Gene 7454] {aka IMD2, SCNX, THC, THC1, WASP, WASPA}, fbxo5 (F-box protein 5) [NCBI Gene 445392] {aka emi1, fc65h02, wu:fc65h02, wu:fe06e07, wu:fz79f03, zgc:136397}, TUBA1B (tubulin alpha 1b) [NCBI Gene 10376] {aka K-ALPHA-1}, rab7a (RAB7a, member RAS oncogene family) [NCBI Gene 393902] {aka rab-7, rab7, zgc:64058}, fli1 (Fli-1 proto-oncogene, ETS transcription factor) [NCBI Gene 30619] {aka cb855, fli, fli-1, fli1a, wu:fc45b11}, RPS4X (ribosomal protein S4 X-linked) [NCBI Gene 6191] {aka CCG2, DXS306, RPS4, S4, SCAR, SCR10}, WASHC3 (WASH complex subunit 3) [NCBI Gene 51019] {aka CCDC53, CGI-116}, WASHC1 (WASH complex subunit 1) [NCBI Gene 100287171] {aka FAM39E, WASH, WASH1}, myh6 (myosin, heavy chain 6, cardiac muscle, alpha) [NCBI Gene 386711] {aka amhc, myhc6}, WASHC4 (WASH complex subunit 4) [NCBI Gene 23325] {aka KIAA1033, MRT43, SWIP}, WASHC5 (WASH complex subunit 5) [NCBI Gene 9897] {aka KIAA0196, RTSC, RTSC1, SPG8}, aldh1a2 (aldehyde dehydrogenase 1 family, member A2) [NCBI Gene 116713] {aka fb50h01, raldh2}, prss1 (serine protease 1) [NCBI Gene 65223] {aka try, wu:fb57g08, zgc:109701}, tcf21 (transcription factor 21) [NCBI Gene 558148] {aka zgc:123313}
- **Diseases:** Pericardial agenesis (MESH:D008476), juvenile lethality (MESH:C536057), toxicity (MESH:D064420), vascular (MESH:D057772), embryonic lethality (MESH:D020964), in both cardiac and skeletal muscle (OMIM:615441), intellectual disability (MESH:D008607), developmental delay (MESH:D002658), neuromuscular and cardiac phenotypes (MESH:D009468), cardiac abnormalities (MESH:D018376), cognitive impairment (MESH:D003072), cardiac failure (MESH:D006333), movement abnormalities (MESH:D004409), cardiac (MESH:D006331), muscle abnormalities (MESH:D009135), hereditary spastic paraplegia (HSP) type 8 (MESH:C580458), Heart edema (MESH:D004487), neurodevelopmental abnormalities (MESH:D063647), cardiometabolic disease (MESH:D024821), congenital defect (MESH:D000013), neurodegenerative disorder (MESH:D019636), Mitochondrial dysfunction (MESH:D028361), developmental abnormalities (MESH:D006130), motor deficits (MESH:D009461), Skeletal muscle defect (MESH:D005207), skeletal muscle abnormalities (MESH:D009139), craniofacial dysmorphism (MESH:C537512), cardiomyopathies (MESH:D009202)
- **Chemicals:** Urea (MESH:D014508), fatty acid (MESH:D005227), TFA (MESH:D014269), H&amp;E (MESH:D006371), AMP1 (-), H2O2 (MESH:D006861), Hematoxylin (MESH:D006416), penicillin (MESH:D010406), PVDF (MESH:C024865), PBS (MESH:D007854), Tween (MESH:D011136), KCl (MESH:D011189), Eosin (MESH:D004801), Oligomycin (MESH:D009840), DAPI (MESH:C007293), DMSO (MESH:D004121), rotenone (MESH:D012402), citrate (MESH:D019343), CO2 (MESH:D002245), ATP (MESH:D000255), TEAB (MESH:C041737), PFA (MESH:C003043), sucrose (MESH:D013395), Chloroform (MESH:D002725), antimycin A (MESH:D000968), EDTA (MESH:D004492), MO (MESH:D060172), streptomycin (MESH:D013307), Triton X-100 (MESH:D017830), Empore (MESH:C003771), ACN (MESH:C032159), Methanol (MESH:D000432), Paraffin (MESH:D010232), Met (MESH:D008715), pyruvate (MESH:D019289), Oxygen (MESH:D010100), phosphate (MESH:D010710), DEPC (MESH:D004047), HCL (MESH:D006851), SDS (MESH:D012967), Laemmli buffer (MESH:C088816), oligonucleotide (MESH:D009841), FCCP (MESH:D002259), ethanol (MESH:D000431), methylcellulose (MESH:D008747), AMP3 (MESH:C003423), water (MESH:D014867)
- **Species:** Homo sapiens (human, species) [taxon 9606], Acinetobacter calcoaceticus (species) [taxon 471], Danio rerio (leopard danio, species) [taxon 7955], Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986], Mus musculus (house mouse, species) [taxon 10090], Adeno-associated virus (species) [taxon 272636], Ovis aries (domestic sheep, species) [taxon 9940]
- **Cell lines:** AC16 — Homo sapiens (Human), Transformed cell line (CVCL_HA69)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12936001/full.md

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12936001/full.md

## References

46 references — full list in the complete paper: https://tomesphere.com/paper/PMC12936001/full.md

---
Source: https://tomesphere.com/paper/PMC12936001