# A phenotype-based cell culture model of melanoma cells that persist as residual disease after therapies leading to recurrence

**Authors:** Balraj Singh, Vanessa N. Sarli, Nikil Erry, Anthony Lucci

PMC · DOI: 10.21203/rs.3.rs-8768856/v1 · Research Square · 2026-02-18

## TL;DR

This paper introduces a cell culture model to study melanoma cells that survive therapies by entering deep quiescence, leading to recurrence.

## Contribution

A novel phenotype-based cell culture model to study therapy-resistant melanoma cells in deep quiescence.

## Key findings

- Glutamine deprivation selects rare melanoma cells capable of deep quiescence and long-term survival.
- Cells selected under this model show increased resistance to paclitaxel compared to parental lines.
- The approach works with both human and mouse melanoma cell lines, indicating broad applicability.

## Abstract

A crucial adaptability trait of stem-like melanoma cells that persist under all selection pressures, including therapies, is their ability to survive in deep quiescence. This ability coupled with their intrinsic ability to proliferate leads to recurrence. Here we describe an approach to modeling this trait in cell culture. A lack of glutamine proved to be a selection pressure for the highly metastatic human melanoma cell line A375SM, killing more than 99% of cells and selecting rare cells based on their ability to survive in deep quiescence. After 4 weeks, cells gradually exited quiescence and proliferated indefinitely. Interestingly, by not providing fresh glutamine-free medium at this stage, we could select rare cells that persist in deep quiescence as single cells. Alternatively, we could model deeper quiescence lasting longer than 4 weeks by increasing the severity of the selection pressure using dialyzed serum in medium. The cells selected in this manner were much more resistant to paclitaxel than was their parental cell line. We obtained similar results with the highly metastatic mouse melanoma cell line B16-BL6. Thus, our phenotype-based approach is suitable for modeling abnormal deep quiescence in melanoma that is responsible for therapy resistance, disease progression, and recurrence/metastasis.

## Linked entities

- **Chemicals:** glutamine (PubChem CID 738), paclitaxel (PubChem CID 36314)
- **Diseases:** melanoma (MONDO:0005105)
- **Species:** Homo sapiens (taxon 9606), Mus musculus (taxon 10090)

## Full-text entities

- **Diseases:** metastasis (MESH:D009362), melanoma (MESH:D008545)
- **Chemicals:** glutamine (MESH:D005973), paclitaxel (MESH:D017239)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** B16-BL6 — Mus musculus (Mouse), Mouse melanoma, Cancer cell line (CVCL_0157), A375SM — Homo sapiens (Human), Amelanotic melanoma, Cancer cell line (CVCL_5649)

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12934999/full.md

## References

28 references — full list in the complete paper: https://tomesphere.com/paper/PMC12934999/full.md

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Source: https://tomesphere.com/paper/PMC12934999