# Protocol for blastomere injection to generate bilateral hemimosaic Xenopus tadpoles

**Authors:** Vanessa J. Li, Philip M. Kesner, Anne Schohl, David Foubert, Nicholas Benfey, Edward S. Ruthazer

PMC · DOI: 10.1016/j.xpro.2026.104387 · STAR Protocols · 2026-02-19

## TL;DR

This paper provides a detailed protocol for creating Xenopus tadpoles with specific genetic manipulations in their neurons.

## Contribution

A new protocol for generating bilateral hemimosaic Xenopus tadpoles with targeted gene expression and knockdown.

## Key findings

- The protocol enables independent manipulation of pre- and postsynaptic neurons in the retinotectal projection.
- It includes methods for mRNA microinjection of GCaMP6s and morpholino injection for GluN1 knockdown.

## Abstract

Here, we present a protocol to generate bilateral hemimosaic Xenopus tadpoles that allows systematic, independent manipulation of pre- and postsynaptic neurons in the tadpole retinotectal projection. We describe the steps to perform in vitro fertilization, followed by blastomere injections for two different manipulations. Specifically, we detail procedures for exogenous gene expression (GCaMP6s) by mRNA microinjection and endogenous gene knockdown (GluN1) with antisense morpholino microinjection.

For complete details on the use and execution of this protocol, please refer to Kesner et al.1 and Li et al.2

•Steps for preparation of mRNA and MO solutions for blastomere injection•Procedures for collection and in vitro fertilization of Xenopus eggs•Instructions for blastomere injection of mRNA or MO•Guidance on screening hemimosaic animals resulting from blastomere injections

Steps for preparation of mRNA and MO solutions for blastomere injection

Procedures for collection and in vitro fertilization of Xenopus eggs

Instructions for blastomere injection of mRNA or MO

Guidance on screening hemimosaic animals resulting from blastomere injections

Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics.

Here, we present a protocol to generate bilateral hemimosaic Xenopus tadpoles that allows systematic, independent manipulation of pre- and postsynaptic neurons in the tadpole retinotectal projection. We describe the steps to perform in vitro fertilization, followed by blastomere injections for two different manipulations. Specifically, we detail procedures for exogenous gene expression (GCaMP6s) by mRNA microinjection and endogenous gene knockdown (GluN1) with antisense morpholino microinjection.

## Linked entities

- **Genes:** GRIN1 (glutamate ionotropic receptor NMDA type subunit 1) [NCBI Gene 2902]
- **Species:** Xenopus (taxon 8353)

## Full-text entities

- **Genes:** tubb2b (tubulin beta 2B class IIb) [NCBI Gene 394889] {aka N-Tub, NBT, NST, Xn-tubulin, n-tubulin, ntubulin}, sp6 (Sp6 transcription factor) [NCBI Gene 100494184] {aka xsp6}, cga (glycoprotein hormones, alpha polypeptide) [NCBI Gene 100488153] {aka cg-alpha, cga-a, cga-b, fsha, gpha, gpha1}
- **Diseases:** cytotoxicity (MESH:D064420), developmental (MESH:C567924), skin, eye and (MESH:D012878), developmental defects (MESH:D000094602), bruise (MESH:D003288), respiratory irritation (MESH:D012131)
- **Chemicals:** pentobarbital (MESH:D010424), MO (MESH:D060172), oxygen (MESH:D010100), HEPES (MESH:D006531), Ficoll (MESH:D005362), phosphates (MESH:D010710), salt (MESH:D012492), saline (MESH:D012965), Barth's solution (-), Parafilm (MESH:D010232), NaOH (MESH:D012972), MS-222 (MESH:C003636), calcium (MESH:D002118), insulin (MESH:D007328), ethanol (MESH:D000431), MOs (MESH:D008982), silicone (MESH:D012828), oligonucleotide (MESH:D009841), agarose (MESH:D012685), PLA (MESH:C033616), Cysteine (MESH:D003545), morpholine (MESH:C037574), H2O (MESH:D014867)
- **Species:** Rodentia (rodent, order) [taxon 9989], Rattus norvegicus (brown rat, species) [taxon 10116], Danio rerio (leopard danio, species) [taxon 7955], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Xenopus laevis (African clawed frog, species) [taxon 8355]
- **Mutations:** R3189S, C for 12-24

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12934307/full.md

## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12934307/full.md

## References

25 references — full list in the complete paper: https://tomesphere.com/paper/PMC12934307/full.md

---
Source: https://tomesphere.com/paper/PMC12934307