# Specific role of two NlpC/P60 endopeptidases in cell division and membrane vesicle formation in Deinococcus radiodurans

**Authors:** Tim Kamara, Geoffrey Martinez, Nicolas Eugénie, Murielle Dutertre, Fabrice Confalonieri, Esma Bentchikou, Pascale Servant

PMC · DOI: 10.1016/j.crmicr.2026.100568 · Current Research in Microbial Sciences · 2026-02-11

## TL;DR

This study explores how specific enzymes in Deinococcus radiodurans help with cell division and stress response, revealing their roles in cell survival and structure.

## Contribution

The paper identifies and characterizes the roles of three NlpC/P60 endopeptidases in D. radiodurans, linking cell wall remodeling to genotoxic stress response.

## Key findings

- CwlA is essential for cell viability and cell wall integrity.
- CwlB is involved in cell septation, while CwlC is not required for cell shape or division.
- CwlA expression is repressed under DdrO depletion, linking genotoxic stress to cell wall remodeling.

## Abstract

•Three NlpC/P60 endopeptidases identified in Deinococcus radiodurans.•CwlA is essential for cell viability and cell wall integrity.•CwlB is involved in cell septation whereas CwlC is dispensable.•Regulatory link between CwlA expression and the genotoxic stress response pathway.

Three NlpC/P60 endopeptidases identified in Deinococcus radiodurans.

CwlA is essential for cell viability and cell wall integrity.

CwlB is involved in cell septation whereas CwlC is dispensable.

Regulatory link between CwlA expression and the genotoxic stress response pathway.

The bacterial cell wall is composed of peptidoglycan (PG), a sugar polymer cross-linked by short peptide stems. PG determines cell morphology and protects it from environmental stresses. Cell growth and division require a balance between synthesis and hydrolysis of the PG. One class of PG hydrolase is the NlpC/P60 superfamily which is broadly distributed in bacteria, archaea, eukaryotes and viruses. Deinococcus radiodurans, characterized by its extreme radioresistance, is a diderm bacterium with a thick layer of PG located between the inner and outer membrane. D. radiodurans exhibits three NlpC/P60 endopeptidases, their role in morphogenesis and cell cycle remains unexplored. In this work, we investigated the role of each endopeptidase in cell division to assess their specific role. Here, we showed that the CwlB protein is involved in cell division and that cwlA gene is essential for cell viability. The CwlC protein is not required for cell shape maintenance or cell division. We showed that CwlA protein is homogeneously localized around the cell except on septal region. CwlA-depleted cells lost viability, displayed morphological changes, and produced numerous membrane vesicles, similarly to cells exposed to sublethal mitomycin C (a DNA-damaging agent) or to DdrO depletion, the transcriptional repressor of the main genotoxic stress response in Deinococcus. We showed that cwlA expression is highly repressed under DdrO depletion. These data suggested a link between response pathway to genotoxic conditions and cell wall remodeling.

Image, graphical abstract

## Linked entities

- **Genes:** cwlA (N-acetylmuramoyl-L-alanine amidase; skin element) [NCBI Gene 937772], cwlC (N-acetylmuramoyl-L-alanine amidase (sporulation-specific)) [NCBI Gene 940088]
- **Proteins:** cwlA (N-acetylmuramoyl-L-alanine amidase; skin element), cwlC (N-acetylmuramoyl-L-alanine amidase (sporulation-specific))
- **Chemicals:** mitomycin C (PubChem CID 5746)
- **Species:** Deinococcus radiodurans (taxon 1299)

## Full-text entities

- **Diseases:** membrane abnormalities (MESH:D015433)
- **Chemicals:** DAPI (-), spectinomycin (MESH:D000198), l-ornithine (MESH:D009952), sugar (MESH:D000073893), HMPA (MESH:D006492), mitomycin (MESH:D016685), aspartic acid (MESH:D001224), polysaccharide (MESH:D011134), ciprofloxacin (MESH:D002939), agar (MESH:D000362), hygromycin (MESH:C026273), carbohydrate (MESH:D002241), N-acetylglucosamine (MESH:D000117), tyrosine (MESH:D014443), water (MESH:D014867), FM 4-64 (MESH:C092350), cacodylate (MESH:D002101), carotenoids (MESH:D002338), lipid (MESH:D008055), paraformaldehyde (MESH:C003043), LPS (MESH:D008070), agarose (MESH:D012685), potassium ferrocyanide (MESH:C031835), glutaraldehyde (MESH:D005976), HU (MESH:D006918), asparagine (MESH:D001216), chloramphenicol (MESH:D002701), ethanol (MESH:D000431), dextrose (MESH:D005947)
- **Species:** Corynebacterium (genus) [taxon 1716], Bacillus subtilis (species) [taxon 1423], Listeria monocytogenes (species) [taxon 1639], Escherichia coli (E. coli, species) [taxon 562], Pseudomonas aeruginosa (species) [taxon 287], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Deinococcota (phylum) [taxon 1297], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Methanobrevibacter smithii (species) [taxon 2173], Deinococcus radiodurans (species) [taxon 1299]
- **Cell lines:** DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531), SCS110 — Homo sapiens (Human), Synovial sarcoma, Cancer cell line (CVCL_WU91)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12934235/full.md

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12934235/full.md

## References

48 references — full list in the complete paper: https://tomesphere.com/paper/PMC12934235/full.md

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Source: https://tomesphere.com/paper/PMC12934235