# Computational perspectives on tubulin E-hook structure and mechanisms

**Authors:** Alexander C. Bromley, Dana N. Reinemann

PMC · DOI: 10.1016/j.bpr.2026.100249 · Biophysical Reports · 2026-01-08

## TL;DR

This review discusses how computational methods are helping to understand the structure and function of E-hooks in tubulin, which are important for microtubule interactions.

## Contribution

The paper synthesizes recent computational studies on E-hook structure and function across tubulin isotypes.

## Key findings

- Computational studies reveal subunit-specific features of E-hooks influencing microtubule behavior.
- E-hooks modulate binding affinity and conformational states of motor and microtubule-associated proteins.
- Technological advances improve the interpretation of E-hook function and guide future research.

## Abstract

E-hooks, or the C-terminal tails of tubulin, mediate interactions between microtubules and associated proteins. Despite their functional importance in cellular and physiological processes, their structural variability and mechanistic roles remain poorly understood. E-hooks are thought to be intrinsically disordered to some degree, making crystallographic studies difficult and necessitating the use of computational tools to study their structures and how they change E-hook function. This review synthesizes recent computational efforts to elucidate E-hook structure, dynamics, and functional differentiation across tubulin isotypes. We examine studies probing E-hooks in isolation or with globular cores, which have revealed subunit-specific features influencing microtubule behavior. We also evaluate the role of E-hooks in modulating binding affinity and conformational states of motor proteins and microtubule-associated proteins. Finally, we highlight adjacent technological and methodological advances that have implications for both the interpretation of past findings and the design of future studies, offering new directions for the investigation of E-hook-mediated microtubule regulation.

## Linked entities

- **Proteins:** gammaTub23C (gamma-Tubulin at 23C)

## Full-text entities

- **Genes:** TUBA4A (tubulin alpha 4a) [NCBI Gene 7277] {aka ALS22, CMYO26, FTDALS9, H2-ALPHA, OZEMA23, SPAX11}, MAPRE1 (microtubule associated protein RP/EB family member 1) [NCBI Gene 22919] {aka EB1}, Cacna1b (calcium voltage-gated channel subunit alpha1 B) [NCBI Gene 257648] {aka BIII}, CACNA1E (calcium voltage-gated channel subunit alpha1 E) [NCBI Gene 777] {aka BII, CACH6, CACNL1A6, Cav2.3, DEE69, EIEE69}, CLIP1 (CAP-Gly domain containing linker protein 1) [NCBI Gene 6249] {aka CLIP, CLIP-170, CLIP170, CYLN1, RSN}, MLRL (Myeloid leukemia-related gene (myeloid tumor suppressor)) [NCBI Gene 8201] {aka MLRG, MTS}, MAPT (microtubule associated protein tau) [NCBI Gene 4137] {aka DDPAC, FTD1, FTDP-17, MAPTL, MSTD, MTBT1}, TUBA1B (tubulin alpha 1b) [NCBI Gene 10376] {aka K-ALPHA-1}, TUBB3 (tubulin beta 3 class III) [NCBI Gene 10381] {aka CDCBM, CDCBM1, CFEOM3, CFEOM3A, FEOM3, TUBB4}, PRAME (PRAME nuclear receptor transcriptional regulator) [NCBI Gene 23532] {aka CT130, MAPE, OIP-4, OIP4}, KIF1A (kinesin family member 1A) [NCBI Gene 547] {aka ATSV, C2orf20, HSN2C, MRD9, NESCAVS, SPG30}, SPAST (spastin) [NCBI Gene 6683] {aka ADPSP, FSP2, SPG4}, INO80 (INO80 complex ATPase subunit) [NCBI Gene 54617] {aka INO80A, INOC1}, KIF2A (kinesin family member 2A) [NCBI Gene 3796] {aka CDCBM3, HK2, KIF2}
- **Diseases:** defects (MESH:D000013), neurodegenerative or muscular disorders (MESH:D019636), MD (MESH:D000092242), cancer (MESH:D009369), Alzheimer's disease (MESH:D000544), tubulopathies (MESH:C557674), degeneration (MESH:D009410)
- **Chemicals:** GTP (MESH:D006160), oxygen (MESH:D010100), nitrogen (MESH:D009584), EA (MESH:D004976), Taxol (MESH:D017239), histidine (MESH:D006639), ADP (MESH:D000244), water (MESH:D014867), ED (MESH:D004540), peptides (MESH:D010455), L-Glutamic acid (MESH:D018698), EDEA (-), amino acids (MESH:D000596), lipids (MESH:D008055), hydrogen (MESH:D006859)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12933465/full.md

## References

135 references — full list in the complete paper: https://tomesphere.com/paper/PMC12933465/full.md

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Source: https://tomesphere.com/paper/PMC12933465