# Ustilago maydis disrupts carbohydrate signaling networks to induce hypertrophy in host cells

**Authors:** Yoon Joo Lee, Dong Zhang, Sara Christina Stolze, Georgios Saridis, Malaika K. Ebert, Hirofumi Nakagami, Gunther Doehlemann

PMC · DOI: 10.1038/s41467-026-69532-8 · Nature Communications · 2026-02-20

## TL;DR

The fungus Ustilago maydis causes leaf tumors in maize by using a protein called Hap1 to alter plant metabolism and cell growth.

## Contribution

The study identifies Hap1 as a fungal effector that modulates SnRK1 signaling to induce hypertrophy in maize.

## Key findings

- Hap1 promotes endoreduplication and starch accumulation in infected maize tissues.
- Hap1 upregulates starch biosynthesis and cell cycle genes while suppressing plant defense.
- Hap1 interacts with ZmSnRK1α and increases its stability through Hip1 and Hip2.

## Abstract

Ustilago maydis infection in maize causes hypertrophic leaf tumors; however, the underlying mechanisms driving this excessive cell growth are unknown. In this study, we identify Hap1 (hypertrophy-associated protein 1) as an effector and virulence factor that regulates mesophyll cell hypertrophy. Using CRISPR-Cas9 mutagenesis, we demonstrate that Hap1 contributes to endoreduplication and starch accumulation in infected tissues. Transcriptomics revealed Hap1-dependent upregulation of starch biosynthesis and cell cycle genes, as well as suppression of plant defense. This links Hap1 to metabolic and cell cycle reprogramming, and immune suppression. To identify the target of Hap1 that drives metabolic reprogramming, we investigated its interaction with ZmSnRK1α in maize. We found that Hap1 interferes with the phosphorylation of SnRK1 substrates and that two Hap1-interacting effectors, Hip1 and Hip2, enhance its protein stability. We conclude that Hap1 contributes to the reprogramming of maize metabolism and cell cycle, as well as mesophyll cell hypertrophy, by modulating the SnRK1 signaling pathway to regulate starch biosynthesis and host defense responses.

Here the authors identify the fungal effector Hap1 as a key driver of maize leaf tumor growth. Hap1 rewires plant metabolism and the cell cycle via SnRK1 signaling, promoting starch accumulation and cell enlargement.

## Linked entities

- **Genes:** HAP1 (huntingtin associated protein 1) [NCBI Gene 9001], HIP1 (huntingtin interacting protein 1) [NCBI Gene 3092], UBE2K (ubiquitin conjugating enzyme E2 K) [NCBI Gene 3093]
- **Proteins:** HAP1 (huntingtin associated protein 1), HIP1 (huntingtin interacting protein 1), UBE2K (ubiquitin conjugating enzyme E2 K)

## Full-text entities

- **Genes:** starch-branching enzyme I [NCBI Gene 542315], histone H3 [NCBI Gene 103636448], Acaca (acetyl-CoA carboxylase alpha) [NCBI Gene 60581] {aka ACC1, Acac}, Hap1 (huntingtin-associated protein 1) [NCBI Gene 29430] {aka HAP1-A, HAP1-B}, PP2C [NCBI Gene 542176], sucrose synthase 2 [NCBI Gene 542091], protein phosphatase 2C [NCBI Gene 100286089], Sucrose synthase 7 [NCBI Gene 100278478], PRKAA1 (protein kinase AMP-activated catalytic subunit alpha 1) [NCBI Gene 5562] {aka AMPK, AMPK alpha 1, AMPKa1}, peroxidase [NCBI Gene 542029], SnRK1 [NCBI Gene 542687], HAP1 (huntingtin associated protein 1) [NCBI Gene 9001] {aka HAP2, HIP5, HLP, hHLP1}, serine-threonine kinase [NCBI Gene 100217272], phosphatase [NCBI Gene 100217049], LOC542238 (amylose extender 1) [NCBI Gene 542238] {aka GRMZM2G032628, SBE1, SBEIIb, ae1}, SPS1 [NCBI Gene 542711]
- **Diseases:** calcium (MESH:D002128), hypertrophic (MESH:D002312), CR-H (MESH:D000848), chlorosis (MESH:D000747), Infection (MESH:D007239), hypertrophy (MESH:D006984), U. maydis infection (MESH:C536925), clubroot disease (MESH:D004194), hypertrophic tumor (MESH:D009369), Fusarium head blight (MESH:D006258)
- **Chemicals:** acetosyringone (MESH:C051667), piperidine (MESH:C032727), TiO2 (MESH:C009495), Co (MESH:D003035), ammonium acetate (MESH:C018824), Sucrose (MESH:D013395), cysteine (MESH:D003545), lipid (MESH:D008055), ammonium hydroxide (MESH:D064753), Lugol (MESH:C010389), KCl (MESH:D011189), tween (MESH:D011136), PI (MESH:D011419), BioRender (-), phosphopeptide (MESH:D010748), CAA (MESH:C013874), silica (MESH:D012822), Glycerol (MESH:D005990), phosphoric acid (MESH:C030242), urea (MESH:D014508), amino acids (MESH:D000596), TFA (MESH:D014269), Ser (MESH:D012694), starch (MESH:D013213), DDA (MESH:C000849), carbohydrate (MESH:D002241), PD (MESH:D010165), carboxin (MESH:D002261), LA (MESH:D007811), Peptides (MESH:D010455), TRIzol (MESH:C411644), CaCl2 (MESH:D002122), MES (MESH:C004550), brassinosteroid (MESH:D060406), DTT (MESH:D004229), SDS (MESH:D012967), methionine (MESH:D008715), MgCl2 (MESH:D015636), ABA (MESH:D000040), NaCl (MESH:D012965), sugar (MESH:D000073893), FA (MESH:C030544), lactic acid (MESH:D019344), ethylene (MESH:C036216), EDTA (MESH:D004492), nitrogen (MESH:D009584), ACN (MESH:C032159), Empore (MESH:C003771), agar (MESH:D000362), D-luciferin (MESH:C532924), Triton X-100 (MESH:D017830), TCA (MESH:D014233), carbon (MESH:D002244)
- **Species:** Plasmodiophora brassicae (species) [taxon 37360], Nicotiana benthamiana (species) [taxon 4100], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Agrobacterium tumefaciens (species) [taxon 358], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Rattus norvegicus (brown rat, species) [taxon 10116], Zea mays (maize, species) [taxon 4577], Homo sapiens (human, species) [taxon 9606], Mycosarcoma maydis (corn smut, species) [taxon 5270], Escherichia coli (E. coli, species) [taxon 562], Fusarium graminearum (species) [taxon 5518], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932]
- **Cell lines:** CR-UMAG_02473 — Homo sapiens (Human), Transformed cell line (CVCL_M998), UMAG_00792 — Homo sapiens (Human), Parkinson disease, Transformed cell line (CVCL_BZ35), UMAG_00793 — Homo sapiens (Human), Parkinson disease, Transformed cell line (CVCL_BZ36), UMAG_00753 — Homo sapiens (Human), Finite cell line (CVCL_2H03), HPT — Mesocricetus auratus (Golden hamster), Hamster neoplasm, Cancer cell line (CVCL_Y446), UMAG_10642 — Homo sapiens (Human), Sjogren-Larsson syndrome, Finite cell line (CVCL_HQ04), CR — Cairina moschata (Muscovy duck), Transformed cell line (CVCL_S509)

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12932821/full.md

## References

3 references — full list in the complete paper: https://tomesphere.com/paper/PMC12932821/full.md

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Source: https://tomesphere.com/paper/PMC12932821