# Salidroside targets the Notch1/Hes5 axis to reconstruct the molecular innate immune–vascular network and correlates with repair after ischemic stroke

**Authors:** Jing Zeng, Xiaohua Huang, Jingyi Zeng, Qi Huang, Wenyi Song, Youfeng Xie, Guining Liang, Qingyan Wei, Yating Lan, Donghua Zou, Rongjie Li, Lian Gu

PMC · DOI: 10.3389/fimmu.2026.1756559 · Frontiers in Immunology · 2026-02-11

## TL;DR

This study explores how salidroside, a compound from traditional Chinese medicine, may help repair brain damage after a stroke by targeting specific immune and vascular cells.

## Contribution

The study identifies a specific astrocyte subpopulation and its response to salidroside at single-cell resolution in ischemic stroke.

## Key findings

- Ischemic stroke causes significant changes in immune and glial cell subpopulations in the brain.
- Salidroside treatment modulates Notch1/Hes5 signaling in astrocytes and partially normalizes vascular and immune alterations.
- Salidroside is associated with reduced neuroimmune activation and altered cell communication in stroke models.

## Abstract

Ischemic stroke (IS) induces profound dysregulation of the neuro–molecular innate immune–vascular network, yet the molecular immune states and regulatory mechanisms of key cellular subpopulations remain insufficiently defined. Although traditional Chinese medicine (TCM) exhibits multi-target immunomodulatory potential, its cell-type and cell-state–specific actions within the ischemic brain microenvironment at single-cell resolution remain unclear.

Single-cell RNA sequencing was used to construct a cellular atlas of the ischemic mouse brain, followed by integrative bioinformatic analyses to characterize innate immune–related neural cell subpopulations and their regulatory networks. Network pharmacology and molecular docking were applied to identify salidroside (SAL), a major active compound of Rhodiola, and predict its potential molecular targets. In vivo experiments were performed to validate cellular and molecular changes associated with SAL treatment.

In a mouse model of IS, ischemic injury induced pronounced imbalances across multiple immune and glial cell subpopulations. A transcriptionally defined Notch1+ Hes5+ astrocyte (ASC), enriched for progenitor-like and reparative gene signatures, was markedly reduced after ischemic injury, whereas reactive SerpinA3N+ ASC and pro-inflammatory Sell+ microglia (MG) were expanded. Additionally, alterations were observed in immune-regulatory cell populations, including Cxcl12+ endothelial cells (ECs) and Gpr34+ Ptgs1+ MG. In vivo validation showed that SAL treatment was associated with modulation of Notch1/Hes5 signaling in ASC, reduced reactive ASC features, and partial normalization of ECs alterations, accompanied by changes consistent with attenuated neuroimmune activation. These effects coincided with altered intercellular communication, particularly involving NOTCH signaling.

This study provides single-cell–level insights into innate immune microenvironment remodeling following IS and identifies a Notch1+ Hes5+ ASC subpopulation with transcriptional features associated with reparative-related programs and responsiveness to SAL. The findings suggest that SAL-associated neuroprotection was accompanied by modulation of ASC states and immune–glial communication, highlighting the potential of SAL-associated immunoregulatory effects at the single-cell level in IS.

## Linked entities

- **Genes:** NOTCH1 (notch receptor 1) [NCBI Gene 4851], HES5 (hes family bHLH transcription factor 5) [NCBI Gene 388585], Serpina3n (serine (or cysteine) peptidase inhibitor, clade A, member 3N) [NCBI Gene 20716], SELL (selectin L) [NCBI Gene 6402], CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387], GPR34 (G protein-coupled receptor 34) [NCBI Gene 2857], PTGS1 (prostaglandin-endoperoxide synthase 1) [NCBI Gene 5742]
- **Chemicals:** salidroside (PubChem CID 159278)
- **Diseases:** ischemic stroke (MONDO:1060198)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Sell (selectin, lymphocyte) [NCBI Gene 20343] {aka CD62L, L-selectin, LAM-1, LECAM-1, LECAM1, Lnhr}, NOTCH1 (notch receptor 1) [NCBI Gene 4851] {aka AOS5, AOVD1, TAN1, hN1}, Nr1d1 (nuclear receptor subfamily 1, group D, member 1) [NCBI Gene 217166] {aka A530070C09Rik}, Jak2 (Janus kinase 2) [NCBI Gene 16452] {aka Fd17}, Serpina3n (serine (or cysteine) peptidase inhibitor, clade A, member 3N) [NCBI Gene 20716] {aka Spi2-2, Spi2.2, Spi2/eb.4}, Runx3 (runt related transcription factor 3) [NCBI Gene 12399] {aka AML2, Cbfa3, Pebp2a3, Rx3}, Notch1 (notch 1) [NCBI Gene 18128] {aka 9930111A19Rik, Mis6, N1, Tan1, lin-12}, N (Notch) [NCBI Gene 31293] {aka 1.1, 16-178, 16-55, Ax, CG3936, CT13012}, Flt1 (FMS-like tyrosine kinase 1) [NCBI Gene 14254] {aka Flt-1, VEGFR-1, VEGFR1, sFlt1}, Foxd2 (forkhead box D2) [NCBI Gene 17301] {aka Mf2}, Itpr3 (inositol 1,4,5-triphosphate receptor 3) [NCBI Gene 16440] {aka IP3R 3, IP3R-3, Ip3r3, Itpr-3, tf}, E2f1 (E2F transcription factor 1) [NCBI Gene 13555] {aka E2F-1, Tg(Wnt1-cre)2Sor, mKIAA4009}, Hes5 (hes family bHLH transcription factor 5) [NCBI Gene 15208] {aka bHLHb38}, grn (grain) [NCBI Gene 40962] {aka CG9656, CG9656-PA, Dmel\CG9656, GATAc, GRAIN, Gata-c}, Stat3 (signal transducer and activator of transcription 3) [NCBI Gene 20848] {aka 1110034C02Rik, Aprf}, Synpo2 (synaptopodin 2) [NCBI Gene 118449] {aka 1110069I04Rik, 2310068J10Rik, 9530006G20Rik, Myo}, COX1 (cytochrome c oxidase subunit I) [NCBI Gene 17708] {aka CoxI}, Ptgs1 (prostaglandin-endoperoxide synthase 1) [NCBI Gene 19224] {aka COX1, Cox-1, Cox-3, PGHS-1, PHS 1, Pghs1}, Hc (hemolytic complement) [NCBI Gene 15139] {aka C5, C5a, He, Hfib2}, ac (achaete) [NCBI Gene 30981] {aka 990 E5 F1, AS-C, AS-C T5, AS-C T5ac, ASC, Achaete}, Ascl1 (achaete-scute family bHLH transcription factor 1) [NCBI Gene 17172] {aka ASH1, Mash1, bHLHa46}, Cxcl12 (C-X-C motif chemokine ligand 12) [NCBI Gene 20315] {aka Pbsf, Scyb12, Sdf1, Tlsf, Tpar1}, Gfap (glial fibrillary acidic protein) [NCBI Gene 14580], HES5 (hes family bHLH transcription factor 5) [NCBI Gene 388585] {aka bHLHb38}, Tlr4 (toll-like receptor 4) [NCBI Gene 21898] {aka Lps, Ly87, Ran/M1, Rasl2-8}, Aim2 (absent in melanoma 2) [NCBI Gene 383619] {aka Gm1313, Ifi210}, Itgb1bp1 (integrin beta 1 binding protein 1) [NCBI Gene 16413] {aka Icap1}, dpp (decapentaplegic) [NCBI Gene 33432] {aka BMP, Bmp, CG9885, DPP-C, Dm-DPP, DmDPP}, Gpr34 (G protein-coupled receptor 34) [NCBI Gene 23890] {aka Lypsr1}, Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, Stat6 (signal transducer and activator of transcription 6) [NCBI Gene 20852], Pla1a (phospholipase A1 member A) [NCBI Gene 85031] {aka Ps-pla1, Pspla1}, Grn (granulin) [NCBI Gene 14824] {aka GP88, PCDGF, PEPI, Pgrn, epithelin}, Klf15 (Kruppel-like transcription factor 15) [NCBI Gene 66277] {aka 1810013I09Rik, CKLF, KKLF, hlb444}
- **Diseases:** SMC (MESH:D018235), ischemia (MESH:D007511), inflammatory dysregulation (MESH:D021081), Stroke (MESH:D020521), OLG (MESH:D056784), neuroinflammation (MESH:D000090862), HS (MESH:D000083302), CNS diseases (MESH:D002493), vascular dysfunction (MESH:D002561), IS (MESH:D002544), cerebral ischemia (MESH:D002545), ischemic injury (MESH:D017202), neurotoxic (MESH:D020258), MCAO (MESH:D020244), vascular occlusion (MESH:D008641), ischemic brain injury (MESH:D001930), thrombotic (MESH:D013927), reactive astrogliosis (MESH:D005911), hyperlipidemia (MESH:D006949), inflammation (MESH:D007249)
- **Chemicals:** 4',6-Diamidino-2-phenylindole (MESH:C007293), GLU- (MESH:D018698), alcohol (MESH:D000438), tryptophan (MESH:D014364), cottonseed oil (MESH:D003369), astragaloside IV (MESH:C052064), PFA (MESH:C003043), AP (MESH:D000667), pentobarbital sodium (MESH:D010424), SAL (MESH:C009172), EDTA (MESH:D004492), prostaglandin (MESH:D011453), paraffin (MESH:D010232), 3-HKA (-), silicon (MESH:D012825), ginsenosides (MESH:D036145)
- **Species:** Rhodiola (genus) [taxon 202994], Homo sapiens (human, species) [taxon 9606], Rodentia (rodent, order) [taxon 9989], Mus musculus (house mouse, species) [taxon 10090], Rhodiola rosea (rose-root, species) [taxon 203015]

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## Figures

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## References

52 references — full list in the complete paper: https://tomesphere.com/paper/PMC12932452/full.md

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Source: https://tomesphere.com/paper/PMC12932452