# The impact of nanodrugs on the metagenome of tobacco rhizosphere soil

**Authors:** Chun-Mei Lai, Xiao-Shan Xiao, Li-Wei Liu, Xue-Li Li, Yu-Wei Luo, Yan-Qi Liang, Yan Cheng, Yuan Qin

PMC · DOI: 10.3389/fmicb.2025.1715400 · Frontiers in Microbiology · 2026-02-11

## TL;DR

This study shows that nanodrugs improve tobacco health by enhancing soil microbes and activating key metabolic functions.

## Contribution

The study reveals how nanodrugs shape soil microbial communities and activate metabolic pathways to reduce tobacco diseases.

## Key findings

- Nanodrugs increased bacterial diversity and recruited beneficial microbes like Sphingomonas and Pseudomonas.
- Nanodrug treatment enriched energy metabolism functions such as electron transfer and ATPase activity.
- Key metabolic pathways like fatty acid metabolism and purine metabolism were significantly activated.

## Abstract

The occurrence of tobacco diseases seriously restricts the healthy development of the tobacco industry. Soil microorganisms play an important role in regulating ecosystem functions. However, the impact of nanodrugs on the rhizosphere microbial community of tobacco and its related functions is still unclear. Therefore, this study combined field experiments to evaluate the effect of nanodrugs in reducing diseases and combined metagenomic sequencing to further explore the micro-ecological mechanism of nanodrugs in stably reducing soil biological barriers. The results show that nanodrugs can significantly improve the health level of tobacco. Metagenomic sequencing found that nanodrugs treatment increased the diversity and abundance of bacterial communities and could regulate the structure of soil microbial communities. It could selectively recruit beneficial microorganisms such as Sphingomonas, Bradyrhizobium, Pseudomonas, and Nocardioides to assist tobacco in disease control. GO function analysis showed that nanodrug treatment groups had significant enrichment of energy metabolism-related functions such as electron transfer activity, ATPase activity, and redox processes. KEGG pathway analysis showed that the relative abundance of key metabolic pathways such as fatty acid metabolism, aminoacyl-tRNA biosynthesis, ribosome, and purine metabolism was significantly increased. This study found that nanodrugs may indirectly promote plant health and alleviate tobacco diseases by shaping microbial community structure, enriching beneficial bacterial communities, and activating key metabolic pathways. These findings provide a theoretical basis for the application of NMs in the regulation of agricultural micro-ecosystems.

## Linked entities

- **Species:** Sphingomonas (taxon 13687), Bradyrhizobium (taxon 374), Pseudomonas (taxon 286), Nocardioides (taxon 1839)

## Full-text entities

- **Diseases:** black (MESH:D007898), sheath blight (MESH:D018317), tobacco diseases (MESH:D014029), disease (MESH:D004194), bacterial (MESH:D001424), fungal infections (MESH:D009181), X (MESH:D000326), toxicity (MESH:D064420)
- **Chemicals:** CuCl2 (MESH:C029892), water (MESH:D014867), terpenoids (MESH:D013729), copper (MESH:D003300), Silver (MESH:D012834), polyketides (MESH:D061065), phosphate (MESH:D010710), phosphorus (MESH:D010758), sugar (MESH:D000073893), nitrogen (MESH:D009584), SeNPs (MESH:C059702), glycan (MESH:D011134), C (MESH:D002244), substances (MESH:C012600), ATP (MESH:D000255), Agarose (MESH:D012685), purine (MESH:C030985), A (MESH:D001151), auxins (MESH:D007210), sulfur (MESH:D013455), graphene (MESH:D006108), Carbon nanosols (-), aminoacyl-tRNA (MESH:D012346), potassium (MESH:D011188), amino acid (MESH:D000596), carbohydrates (MESH:D002241), Fatty acids (MESH:D005227), hydrocarbons (MESH:D006838), nicotine (MESH:D009538), selenium (MESH:D012643)
- **Species:** Nitrosomonas (genus) [taxon 914], Sphingomonas (genus) [taxon 13687], Nitrospiria (class) [taxon 203693], Thiobacillus (genus) [taxon 919], Chaetomium (genus) [taxon 5149], Tobacco mosaic virus (no rank) [taxon 12242], Rhodobacter (genus) [taxon 1060], Dechloromonas (genus) [taxon 73029], Nicotiana tabacum (American tobacco, species) [taxon 4097], Nitrosotalea (genus) [taxon 1078904], Dyella (genus) [taxon 231454], Bradyrhizobium (genus) [taxon 374], Phytophthora nicotianae [taxon 4790], Rhodanobacter (genus) [taxon 75309], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Pseudomonas (RNA similarity group I, genus) [taxon 286], Ralstonia solanacearum (species) [taxon 305], Minimidochium (genus) [taxon 648992], Lysobacter (genus) [taxon 68], Streptomyces (genus) [taxon 1883], Bacillus (genus) [taxon 55087], Nocardioides (genus) [taxon 1839], Thiobacter (genus) [taxon 279809], Rhizobium (genus) [taxon 379], Ralstonia (genus) [taxon 48736], Burkholderia (genus) [taxon 32008], Acidobacteriota (phylum) [taxon 57723]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12932420/full.md

## References

42 references — full list in the complete paper: https://tomesphere.com/paper/PMC12932420/full.md

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Source: https://tomesphere.com/paper/PMC12932420