# Genomic and functional insights into the thermophilic strain Geobacillus sp. Geo 8.1: a source of thermostable xylanase for sustainable bioprocesses

**Authors:** Songül Yaşar Yıldız, Ilaria Finore, Bora Ceylan, Doğa Umaç, Ceyda Kasavi, Gennaro Finore, Antonio Federico, Francesco Nizzolino, Luigi Leone, Annarita Poli, Ebru Toksoy Öner

PMC · DOI: 10.1007/s11274-026-04840-1 · World Journal of Microbiology & Biotechnology · 2026-02-24

## TL;DR

A heat-loving bacterium from a hot spring in Italy produces stable enzymes that could help in sustainable industrial processes.

## Contribution

Discovery of a new thermophilic strain with a complete genomic profile and thermostable xylanase activity for bioprocessing.

## Key findings

- The draft genome of Geobacillus sp. Geo 8.1 includes genes for carbohydrate, lipid, and protein metabolism.
- Crude enzyme extracts showed high xylanase activity at 65°C, with xylose as the main product.
- The strain has a complete D-xylose utilization pathway, linking hemicellulose breakdown to central metabolism.

## Abstract

A thermophilic bacterium, designated Geobacillus sp. Geo 8.1, was isolated from a submarine hydrothermal spring of Ischia Island (Italy) and characterized through genomic and biochemical analyses to evaluate its biotechnological potential. The draft genome (3.41 Mbp; GC 52.5%) revealed 3,751 coding sequences, including complete pathways for carbohydrate, lipid, and protein metabolism, and enzymes involved in stress response and hydrocarbon degradation. Phylogenomic and digital DNA–DNA hybridization analyses placed Geo 8.1 within the Geobacillus thermoleovorans/Geobacillus kaustophilus cluster. Functional annotation highlighted diverse genes encoding thermostable hydrolases such as xylanases, β-xylosidases, lipases, proteases, and α-amylases, together with catalases and dehalogenases relevant to environmental and industrial applications. Crude enzyme extracts exhibited strong xylanase activity (184 U/mL at 65 °C), and thin-layer chromatography confirmed the production of xylose as the major hydrolysis product, indicating the coordinated action of endo-xylanase and β-xylosidase. Genome reconstruction further demonstrated a complete D-xylose utilization pathway linking hemicellulose degradation to central carbon metabolism. The combined genomic and enzyme data reveal Geobacillus sp. Geo 8.1 represents a promising thermophilic biocatalyst for producing thermostable enzymes applicable to lignocellulose valorization, bioremediation, and various industrial processes.

The online version contains supplementary material available at 10.1007/s11274-026-04840-1.

## Linked entities

- **Species:** Geobacillus sp. Geo 8.1 (taxon 3455697)

## Full-text entities

- **Chemicals:** Bacitracin (MESH:D001414), Chloramphenicol (MESH:D002701), rhodamine B (MESH:C029773), Neomycin (MESH:D009355), Lugol's iodine (MESH:C010389), cellulose (MESH:D002482), Lincomycin (MESH:D008034), G + C (MESH:C057580), lignocellulose (MESH:C036909), lipid (MESH:D008055), Novobiocin (MESH:D009675), xylotriose (MESH:C515044), ammonium sulfate (MESH:D000645), sterol (MESH:D013261), Nystatin (MESH:D009761), D-xylose (MESH:D014994), CMC (MESH:D002266), xylobiose (MESH:C004173), Starch (MESH:D013213), chlorine (MESH:D002713), TCA (MESH:D014238), carbohydrate (MESH:D002241), hydrocarbon (MESH:D006838), Congo red (MESH:D003224), xylo-oligosaccharides (MESH:C570991), tetramethyl-p-phenylenediamine (MESH:C000599600), amino acid (MESH:D000596), oligosaccharides (MESH:D009844), n-butanol (MESH:D020001), disulfide (MESH:D004220), Tetracycline (MESH:D013752), glycerol (MESH:D005990), olive oil (MESH:D000069463), Geo 8.1 (-), hydrogen peroxide (MESH:D006861), sulfur (MESH:D013455), hemicellulose (MESH:C007916), Erythromycin (MESH:D004917), Kanamycin (MESH:D007612), ethanol (MESH:D000431), Fusidic Acid (MESH:D005672), D-xylulose-5-phosphate (MESH:C031625), MnCl2 (MESH:C025340), acetic acid (MESH:D019342), Penicillin G (MESH:D010400), Vancomycin (MESH:D014640), Xylan (MESH:D014990), H2O. (MESH:D014867), agar (MESH:D000362), pentose phosphate (MESH:D010428), carbon (MESH:D002244), polysaccharide (MESH:D011134), nitrogen (MESH:D009584), phosphate (MESH:D010710), phosphorus (MESH:D010758), sugars (MESH:D000073893), oxygen (MESH:D010100), metal (MESH:D008670), NaCl (MESH:D012965)
- **Species:** Thermomonas hydrothermalis (species) [taxon 213588], Anoxybacillus (genus) [taxon 150247], Geobacillus thermodenitrificans subsp. calidus (subspecies) [taxon 504926], Homo sapiens (human, species) [taxon 9606], Parageobacillus thermantarcticus (species) [taxon 186116], A. geothermalis [taxon 1490051], Geobacillus thermodenitrificans subsp. thermodenitrificans DSM 465 (strain) [taxon 1413215], Geobacillus zalihae (species) [taxon 213419], Geobacillus sp. (species) [taxon 1891658], Geobacillus kaustophilus NBRC 102445 (strain) [taxon 1220595], Geobacillus thermocatenulatus (species) [taxon 33938], Geobacillus kaustophilus (species) [taxon 1462], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Geobacillus thermodenitrificans (species) [taxon 33940], Geobacillus stearothermophilus ATCC 12980 (strain) [taxon 1366047], Geobacillus stearothermophilus T6 (strain) [taxon 646309], Geobacillus thermoleovorans (species) [taxon 33941], Geobacillus stearothermophilus (species) [taxon 1422]
- **Cell lines:** DUSELR13 — Homo sapiens (Human), Childhood T acute lymphoblastic leukemia, Cancer cell line (CVCL_1081), Geo 8.1 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0271), 8.1 — Mus musculus (Mouse), Hybridoma (CVCL_C2BT)

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## References

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Source: https://tomesphere.com/paper/PMC12932336