# Simulated microgravity induces cerebral dysfunction by disturbing protective microbiota-metabolite-microglia signaling across the gut‒brain axis

**Authors:** Biying Zhang, Yue Si, Yiteng Liu, Jingjing Wei, Mengyun Li, Dailing Si, Huaxian Li, Xichen Wang, Peijun Han, Wenlan Wang, Junxiang Bao, Linfeng Cheng, Yingfeng Lei, Hongwei Ma, Yong Liu

PMC · DOI: 10.1080/19490976.2026.2635820 · Gut Microbes · 2026-02-23

## TL;DR

Simulated microgravity harms brain function by disrupting gut bacteria and their protective metabolites, which can be improved with linoleic acid.

## Contribution

Identifies a microbiota-metabolite-microglia signaling pathway linking simulated microgravity to brain dysfunction and proposes LA supplementation as a countermeasure.

## Key findings

- Simulated microgravity causes gut dysbiosis, increasing Proteobacteria and reducing linoleic acid (LA) production.
- LA supplementation mitigates neuroinflammation and cognitive deficits in simulated microgravity conditions.
- Fecal microbiota transplantation from SMG-treated rats reproduces cognitive impairments in recipients under normal gravity.

## Abstract

Long-duration spaceflight characterized by microgravity adversely affects operator proficiency postlanding, yet the mechanisms by which microgravity induces cerebral dysfunction refractory to short-term recovery among astronauts remain poorly defined. Here, we demonstrate that simulated microgravity (SMG) leads to chronic behavior disorders and cognitive deficits via a microbiota-metabolite-brain axis. Fecal microbiota transplantation (FMT) from long-term SMG-treated donor rats to recipients (n = 5 per group) under normal gravity (NG) induces anxiety-like behaviors and spatial working memory disturbances by impairing synaptic plasticity in the hippocampus, reproducing the phenotype of SMG-exposed rats. SMG destroys intestinal barriers and alters the gut microbiota to a proinflammatory state with an increased abundance of Proteobacteria but decreased production of linoleic acid (LA) and LA-derived metabolites, which is highly associated with neuroinflammation in the hippocampus. Mechanistically, LA can be taken up by the hippocampus under NG conditions, and then block inflammatory microglial activation by interacting with signal transducer and activator of transcription 1 (STAT1) and inhibiting its phosphorylation at Tyr 701 and Ser 727. However, the Proteobacteria, especially Pseudomonas aeruginosa, tend to be the dominant phylum in gut microbiota under SMG conditions and consume large amounts of LA, breaking LA-dependent immune homeostasis in the central nervous system (CNS). Dietary supplementation with LA significantly mitigated SMG-induced neuroinflammation and cognitive impairment. Taken together, our findings in SD rats models reveal a critical role for gut microbiota dysbiosis in simulated microgravity-associated encephalopathy, offering a novel strategy for LA replenishment to improve brain function during spaceflight.

Simulated microgravity-induced cognitive dysfunction is associated with gut microbiota dysbiosis.A sustained increase in the abundance of the phylum Proteobacteria contribute to the undue consumption of linoleic acid (LA), a metabolite that can be taken up by the microglia in the hippocampus and restrain neuroinflammation through inhibition of STAT1 signaling.Dietary supplementation with LA under simulated microgravity conditions could improve brain function by rebuilding the immune homeostasis in the hippocampus and mitigating the synaptic impairment.

Simulated microgravity-induced cognitive dysfunction is associated with gut microbiota dysbiosis.

A sustained increase in the abundance of the phylum Proteobacteria contribute to the undue consumption of linoleic acid (LA), a metabolite that can be taken up by the microglia in the hippocampus and restrain neuroinflammation through inhibition of STAT1 signaling.

Dietary supplementation with LA under simulated microgravity conditions could improve brain function by rebuilding the immune homeostasis in the hippocampus and mitigating the synaptic impairment.

## Linked entities

- **Proteins:** STAT1 (signal transducer and activator of transcription 1)
- **Chemicals:** linoleic acid (PubChem CID 5280450)
- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, Ca2 (carbonic anhydrase 2) [NCBI Gene 54231] {aka Car2}, Cxcr4 (C-X-C motif chemokine receptor 4) [NCBI Gene 60628], Vegfb (vascular endothelial growth factor B) [NCBI Gene 22340] {aka VEGF-B, Vrf}, Il10ra (interleukin 10 receptor subunit alpha) [NCBI Gene 117539], Itgax (integrin alpha X) [NCBI Gene 16411] {aka Cd11c, Cr4, N418}, Cd68 (CD68 antigen) [NCBI Gene 12514] {aka Lamp4, Scard1, gp110}, Ocln (occludin) [NCBI Gene 83497], Gpx1 (glutathione peroxidase 1) [NCBI Gene 24404] {aka GSHPx, GSHPx-1}, Tgfa (transforming growth factor alpha) [NCBI Gene 21802] {aka wa-1, wa1}, Stat1 (signal transducer and activator of transcription 1) [NCBI Gene 20846] {aka 2010005J02Rik}, Tnfrsf11b (TNF receptor superfamily member 11B) [NCBI Gene 25341] {aka Opg}, S100a8 (S100 calcium binding protein A8) [NCBI Gene 116547] {aka Mrp8}, Actb (actin, beta) [NCBI Gene 81822] {aka Actx}, Ccr5 (C-C motif chemokine receptor 5) [NCBI Gene 117029] {aka Ckr5, Cmkbr5}, Tnfsf10 (TNF superfamily member 10) [NCBI Gene 246775] {aka Tnlg6a, Trail}, Ogdh (oxoglutarate dehydrogenase) [NCBI Gene 360975] {aka E1o, OGDH-E1}, Ccl3 (C-C motif chemokine ligand 3) [NCBI Gene 25542] {aka MIP-1a, Scya3}, Csf1 (colony stimulating factor 1) [NCBI Gene 78965] {aka PG-M-CSF}, Gria1 (glutamate ionotropic receptor AMPA type subunit 1) [NCBI Gene 50592] {aka GluA1, gluR-A}, Acsl1 (acyl-CoA synthetase long-chain family member 1) [NCBI Gene 14081] {aka Acas, Acas1, Acs, FACS, Facl2, LACS 1}, Ifitm3 (interferon induced transmembrane protein 3) [NCBI Gene 361673] {aka DSPA2b, rat8}, Aif1 (allograft inflammatory factor 1) [NCBI Gene 29427] {aka BART-1, Bart1, iba1, mrf-1}, TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}, Cxcl12 (C-X-C motif chemokine ligand 12) [NCBI Gene 24772] {aka Sdf1}, Tjp1 (tight junction protein 1) [NCBI Gene 292994] {aka ZO-1}, Il1b (interleukin 1 beta) [NCBI Gene 24494] {aka IL-1F2}, Trem2 (triggering receptor expressed on myeloid cells 2) [NCBI Gene 83433] {aka TREM-2, Trem2a, Trem2b, Trem2c}, Pde6b (phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide) [NCBI Gene 18587] {aka Pdeb, r, rd, rd-1, rd1, rd10}, Tlr4 (toll-like receptor 4) [NCBI Gene 29260], Camk2b (calcium/calmodulin-dependent protein kinase II beta) [NCBI Gene 24245] {aka Ck2b}, Tnf (tumor necrosis factor) [NCBI Gene 24835] {aka RATTNF, TNF-alpha, Tnfa}, Ephb1 (Eph receptor B1) [NCBI Gene 24338] {aka Ephb2, Erk, elk}, Camk2a (calcium/calmodulin-dependent protein kinase II alpha) [NCBI Gene 25400] {aka PK2CDD, PKCCD}, Gria2 (glutamate ionotropic receptor AMPA type subunit 2) [NCBI Gene 29627] {aka GluA2, GluR-K2, GluR2, gluR-B}, Il2rg (interleukin 2 receptor subunit gamma) [NCBI Gene 140924] {aka Ab2-183, Cd132}, Bmp2 (bone morphogenetic protein 2) [NCBI Gene 29373], NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548] {aka AGTAVPRL, AII, AVP, C1orf7, CIAS1, CLR1.1}, Cx3cr1 (C-X3-C motif chemokine receptor 1) [NCBI Gene 171056] {aka Rbs11}, Dlg4 (discs large MAGUK scaffold protein 4) [NCBI Gene 29495] {aka Dlgh4, PSD95, Sap90}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, Prph2 (peripherin 2) [NCBI Gene 19133] {aka AOFMD, AVMD, Nmf193, PRPH, RP7, Rd-2}, Il6 (interleukin 6) [NCBI Gene 24498] {aka ILg6, Ifnb2}, Stat1 (signal transducer and activator of transcription 1) [NCBI Gene 25124] {aka DD6G4-4}, Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, Trem2 (triggering receptor expressed on myeloid cells 2) [NCBI Gene 301227] {aka Trem2-Mia, Trem2-Mib}, Snca (synuclein alpha) [NCBI Gene 29219], Il6st (interleukin 6 cytokine family signal transducer) [NCBI Gene 25205] {aka Ac1055, Gp130, Il-6rb}, Ifitm2 (interferon induced transmembrane protein 2) [NCBI Gene 114709] {aka Ifitm3l, Ifitml}, STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772] {aka CANDF7, IMD31A, IMD31B, IMD31C, ISGF-3, STAT91}, Sod1 (superoxide dismutase 1) [NCBI Gene 24786] {aka CuZnSOD}, Ahr (aryl-hydrocarbon receptor) [NCBI Gene 11622] {aka Ah, Ahh, Ahre, In, bHLHe76}, Bdnf (brain-derived neurotrophic factor) [NCBI Gene 24225], Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, Tbr1 (T-box brain transcription factor 1) [NCBI Gene 680427], Apoe (apolipoprotein E) [NCBI Gene 11816] {aka Apo-E}, CD19 (CD19 molecule) [NCBI Gene 930] {aka B4, CVID3}, Il33 (interleukin 33) [NCBI Gene 361749] {aka RGD1311155}, Arg1 (arginase 1) [NCBI Gene 29221]
- **Diseases:** behavior disorders (MESH:D001523), EAE (MESH:D004679), AD (MESH:D000544), colitis (MESH:D003092), dysbiosis (MESH:D064806), immune disorders (MESH:D007154), gastrointestinal issues (MESH:D005767), weight loss (MESH:D015431), Anxiety (MESH:D001007), neuroinflammation (MESH:D000090862), edema (MESH:D004487), CNS diseases (MESH:D002493), osteoporosis (MESH:D010024), Inflammatory (MESH:D007249), muscle atrophy (MESH:D009133), neurodegeneration (MESH:D019636), injuries (MESH:D014947), amyotrophic lateral sclerosis (MESH:D000690), cerebral dysfunction (MESH:D002547), SMG (MESH:C565484), Death (MESH:D003643), AP (MESH:D009207), pain (MESH:D010146), brain dysfunction (MESH:D001927), proinflammatory bacteria (MESH:C000719206), ASD (MESH:D000067877), brain injury (MESH:D001930), atherosclerosis (MESH:D050197), mitochondrial impairment (MESH:D028361), PD (MESH:D010300), decline in cardiovascular function (MESH:D018376), ACSVD (MESH:D059345), malaise of motor perception (MESH:C535473), metabolic dysregulation (MESH:D021081), social interaction deficits (MESH:D009461), MDD (MESH:D003865), intestinal dysfunction (MESH:D007410), cognitive deficits (MESH:D003072), colon injury (MESH:D003108), memory disturbances (MESH:D008569), motor disorders (MESH:D000068079), cervical dislocation (MESH:D002575), weight gain (MESH:D015430), proinflammatory cytokines (MESH:D000080424), neuronal injury (MESH:D009410), autoimmune encephalomyelitis (MESH:D004681), depression (MESH:D003866), hypoxic (MESH:D002534), dementia (MESH:D003704)
- **Chemicals:** Butyrate (MESH:D002087), xylene (MESH:D014992), MgSO4 (MESH:D008278), RNS (MESH:D026361), amine (MESH:D000588), Triton X-100 (MESH:D017830), Ser (MESH:D012694), acetonitrile (MESH:C032159), Arg (MESH:D001120), fatty acid (MESH:D005227), streptomycin (MESH:D013307), metronidazole (MESH:D008795), phosphocreatine (MESH:D010725), TCA (MESH:D014233), paraffin wax (MESH:D010232), ethanolamine (MESH:D019856), GTP (MESH:D006160), NaHCO3 (MESH:D017693), MgCl2 (MESH:D015636), 9, 12, 13-TriHOME (-), H&amp;E (MESH:D006371), NaCl (MESH:D012965), LA (MESH:D019787), PS (MESH:D010758), tTCA (MESH:C031677), formic acid (MESH:C030544), 3-indolepropionic acid (MESH:C095446), osmium tetroxide (MESH:D009993), hematoxylin (MESH:D006416), QX-314 (MESH:C012647), HEPES (MESH:D006531), penicillin (MESH:D010406), Na+ (MESH:D012964), Tween-20 (MESH:D011136), lysophosphatidylcholine (MESH:D008244), CaCl2 (MESH:D002122), Bicuculline (MESH:D001640), eosin Y (MESH:D004801), sodium acetate (MESH:D019346), Acetate (MESH:D000085), KCl (MESH:D011189), glutaraldehyde (MESH:D005976), thiourea (MESH:D013890), HCl (MESH:D006851), glutamate (MESH:D018698), DL-APV (MESH:D015763), SDS (MESH:D012967), Tryptophan (MESH:D014364), PVDF (MESH:C024865), copper (MESH:D003300), TTX (MESH:D013779), kynurenine (MESH:D007737), 4',6-diamidino-2-phenylindole (MESH:C007293), ethanol (MESH:D000431), D-glucose (MESH:D005947), neomycin (MESH:D009355), EDC (MESH:C024565), ROS (MESH:D017382), CAS (MESH:D002118), Clodronate (MESH:D004002)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Alistipes (genus) [taxon 239759], Pseudomonas aeruginosa (species) [taxon 287], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606], Escherichia coli (E. coli, species) [taxon 562], Shigella flexneri (species) [taxon 623], Lactobacillus acidophilus (species) [taxon 1579], gut metagenome (species) [taxon 749906], Ruminococcus (genus) [taxon 1263], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Akkermansia (genus) [taxon 239934]
- **Mutations:** phenylalanine-tyrosine
- **Cell lines:** BV2 — Mus musculus (Mouse), Transformed cell line (CVCL_0182)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12931916/full.md

## References

105 references — full list in the complete paper: https://tomesphere.com/paper/PMC12931916/full.md

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Source: https://tomesphere.com/paper/PMC12931916