# Root triterpenoid metabolites drive the assembly and feedback regulation of the rhizosphere microbiome during flowering to senescence in Rhododendron hybridum ‘Yangmeihong’

**Authors:** Fei Shan, Chenxi Leng, Yufeng Xiao, Ximin Zhang, Ming Tang, Yin Yi, Jing Tang

PMC · DOI: 10.3389/fmicb.2026.1753104 · Frontiers in Microbiology · 2026-02-10

## TL;DR

This study shows how root triterpenoid metabolites influence the rhizosphere microbiome during the flowering to senescence transition in Rhododendron hybridum.

## Contribution

The study identifies root triterpenoid metabolites as key drivers of rhizosphere microbiome assembly and feedback regulation during plant senescence.

## Key findings

- Root metabolites and rhizosphere microbiome show significant temporal dynamics during flowering to senescence.
- Seven volatile terpenoids correlate with 77 microbial taxa, including plant growth-promoting bacteria.
- Microbial taxa are potentially involved in sulfur cycling and nucleic acid metabolism during senescence.

## Abstract

The flowering-to-senescence transition is a critical developmental period in ornamental plants, yet the interplay between root metabolites and the rhizosphere microbiome during this process remains poorly characterized. Integrating metabolomic and microbiomic analyses of Rhododendron hybridum, we investigated their dynamic interactions. Our analyses revealed both the root metabolome and rhizosphere microbiome exhibited significant temporal dynamics. Differential metabolites significantly enriched in sesquiterpenoid and triterpenoid biosynthesis, while microbial α-diversity peaked at full bloom before declining. The rhizosphere microbial network complexity decreased from flowering to senescence, accompanied by a shift in community assembly from stochastic to more deterministic processes. Furthermore, root metabolites mediated stage-specific assembly of the rhizosphere microbiome. Specifically, seven volatile terpenoids, upregulated during senescence, were significantly correlated with 77 microbial taxa, including putative plant growth-promoting bacteria. Functional prediction suggested that these interacting microbial taxa are potentially involved in sulfur cycling, methionine biosynthesis, and nucleic acid metabolism, indicating a potential role in feedback regulation during senescence. Our findings demonstrate that root triterpenoid metabolites are pivotal in driving rhizosphere microbiome assembly and may receive functional feedback, providing novel insights into microbiome-mediated regulation of floral development and senescence.

## Linked entities

- **Chemicals:** triterpenoid (PubChem CID 451674), sesquiterpenoid (PubChem CID 139087999)

## Full-text entities

- **Diseases:** pests (MESH:D029021), DAMs (MESH:D012734)
- **Chemicals:** K+ (MESH:D011188), phosphate (MESH:D010710), phosphorus (MESH:D010758), formic acid (MESH:C030544), alpha-farnesene (MESH:C062672), sulfate (MESH:D013431), Na+ (MESH:D012964), strigolactones (MESH:C000591191), (Z)-1-Methyl-4-(6-methylhept-5-en-2-ylidene)cyclohex-1-ene (-), L-methionine (MESH:D008715), sodium chloride (MESH:D012965), alpha-thujene (MESH:C000590711), helium (MESH:D006371), sulfur (MESH:D013455), methanol (MESH:D000432), grayanotoxins (MESH:C001311), triterpene (MESH:D014315), esters (MESH:D004952), acetonitrile (MESH:C032159), carbohydrate (MESH:D002241), carbon (MESH:D002244), ethylene (MESH:C036216), amino acid (MESH:D000596), delta-cadinene (MESH:C000607799), nitrogen (MESH:D009584), cysteine (MESH:D003545), phenolic acids (MESH:C017616), sesquiterpenes (MESH:D012717), Terpenoids (MESH:D013729), TB (MESH:D013725), water (MESH:D014867), carotenoids (MESH:D002338), CO2 (MESH:D002245), flavonoids (MESH:D005419), diterpene (MESH:D004224), jasmonates (MESH:C011006), galactose (MESH:D005690), glycosides (MESH:D006027), auxin (MESH:D007210), alpha-humulene (MESH:C042686), brassinosteroids (MESH:D060406), ethylmalonyl-CoA (MESH:C102829), pyrimidine nucleotide (MESH:D011742), IAA (MESH:C030737), 3,4-dimethoxycinnamic acid (MESH:C065784), Beta-selinene (MESH:C087920), benzyl benzoate (MESH:C006723), L-tryptophan (MESH:D014364), SLs (MESH:D012967), alkaloids (MESH:D000470)
- **Species:** Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Escherichia coli (E. coli, species) [taxon 562], Brassica napus (oilseed rape, species) [taxon 3708], Rhododendron (genus) [taxon 4346], Acidobacteriota (phylum) [taxon 57723], Patescibacteria group (clade) [taxon 1783273], Caballeronia (genus) [taxon 1827195], Rhodopila (genus) [taxon 1070], Burkholderia (genus) [taxon 32008], Gaiella (genus) [taxon 1154586], Dyella (genus) [taxon 231454], Bdellovibrio (genus) [taxon 958], Pseudomonas aeruginosa (species) [taxon 287], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Dongia (genus) [taxon 1146845], phototrophic bacterium (species) [taxon 52958], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Acetobacter subgen. Acetobacter (subgenus) [taxon 151157], Rhododendron x hybridum (species) [taxon 1328307], Paraburkholderia (genus) [taxon 1822464], Aquicella (genus) [taxon 254245], Puia (genus) [taxon 2045098], Codonopsis pilosula (species) [taxon 86864]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12931525/full.md

## References

103 references — full list in the complete paper: https://tomesphere.com/paper/PMC12931525/full.md

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Source: https://tomesphere.com/paper/PMC12931525