# TCA cycle intermediates as an adjunct strategy for human iPSC-derived cardiomyocyte maturation

**Authors:** Keshav Narayan Alagarsamy, Emilee Bueckert, Mehak Gupta, Michel Aliani, Sanjiv Dhingra

PMC · DOI: 10.1016/j.bbadva.2026.100183 · BBA Advances · 2026-02-16

## TL;DR

Adding TCA cycle intermediates helps improve the maturity of heart cells made from stem cells, which could aid in disease modeling and regenerative medicine.

## Contribution

The study shows that supplementing TCA cycle intermediates enhances the maturation of iPSC-derived cardiomyocytes.

## Key findings

- TCA cycle intermediates like succinate and malate improve calcium handling and cellular morphology in iPSC-CM.
- Supplementation enhances electrical activity and mitochondrial health, shifting energy metabolism toward oxidative phosphorylation.
- TCA supplementation upregulates maturation genes and downregulates fetal genes in iPSC-CM.

## Abstract

•Targeted metabolomics demonstrate that TCA cycle intermediates play an important role the maturation of iPSC derived cardiomyocytes.•Supplementation of succinate, malate, fumarate and α-ketoglutarate promotes metabolic and functional maturation of iPSC derived cardiomyocytes.

Targeted metabolomics demonstrate that TCA cycle intermediates play an important role the maturation of iPSC derived cardiomyocytes.

Supplementation of succinate, malate, fumarate and α-ketoglutarate promotes metabolic and functional maturation of iPSC derived cardiomyocytes.

Human induced pluripotent stem cell-derived cardiomyocytes (iPSC-CM) are a valuable tool for modeling cardiac diseases, drug testing, and regenerative applications. However, their application is limited by the immature phenotype of iPSC-CM. During maturation from fetal to adult phenotype cardiomyocytes undergo a transition from glycolysis to oxidative phosphorylation for energy production, which is supported by efficient tricarboxylic acid (TCA) cycle activity. Our metabolomics data suggest that the level of intermediates of TCA cycle including succinate, malate, fumarate, and α-ketoglutarate was very low in iPSC-CM. Therefore, we investigated the effect of supplementation with these metabolites on the maturation of iPSC-CM. We cultured iPSC-CM in glucose (Glu), galactose (Gal), or galactose plus TCA cycle intermediates (Gal+TCA) and evaluated the incremental effect of TCA cycle intermediates supplementation relative to Glu and Gal. The treatment with these TCA cycle intermediates led to improved calcium handling and cellular morphology of iPSC-CM relative to Glu and Gal. Furthermore, the treatment with TCA cycle metabolites enhanced electrical activity, improved mitochondrial health, and the cells were shifting toward oxidative phosphorylation relative to Glu only. This shift in the energy metabolism was associated with an upregulation in the expression of cardiomyocyte maturation genes and downregulation in the expression of fetal genes in Gal + TCA group relative to Glu. Overall, the benefits of Gal+TCA supplementation were quite evident compared to Glu alone but generally modest relative to Gal supplementation, supporting that TCA cycle intermediates supplementation can be used as an adjunct strategy to promote iPSC-CM maturation.

## Linked entities

- **Chemicals:** succinate (PubChem CID 160419), malate (PubChem CID 525), fumarate (PubChem CID 5460307), glucose (PubChem CID 5793), galactose (PubChem CID 6036)

## Full-text entities

- **Genes:** KEAP1 (kelch like ECH associated protein 1) [NCBI Gene 9817] {aka INrf2, KLHL19}, SOX2 (SRY-box transcription factor 2) [NCBI Gene 6657] {aka ANOP3, MCOPS3}, KCNJ2 (potassium inwardly rectifying channel subfamily J member 2) [NCBI Gene 3759] {aka ATFB9, HHBIRK1, HHIRK1, IRK1, KIR2.1, LQT7}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, CACNA1C (calcium voltage-gated channel subunit alpha1 C) [NCBI Gene 775] {aka CACH2, CACN2, CACNA1C-IT2, CACNL1A1, CCHL1A1, CaV1.2}, NANOG (Nanog homeobox) [NCBI Gene 79923], TNNI1 (troponin I1, slow skeletal type) [NCBI Gene 7135] {aka SSTNI, TNN1}, ACTN1 (actinin alpha 1) [NCBI Gene 87] {aka BDPLT15}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, ND1 (NADH dehydrogenase subunit 1) [NCBI Gene 4535] {aka MTND1}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, MYL7 (myosin light chain 7) [NCBI Gene 58498] {aka MYL2A, MYLC2A}, SUCNR1 (succinate receptor 1) [NCBI Gene 56670] {aka GPR91}, POU5F1 (POU class 5 homeobox 1) [NCBI Gene 5460] {aka OCT3, OCT4, OCT4Borf1, OTF-3, OTF3, OTF4}, mTOR [NCBI Gene 655393], PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 10891] {aka LEM6, PGC-1(alpha), PGC-1alpha, PGC-1v, PGC1, PGC1A}, TFAM (transcription factor A, mitochondrial) [NCBI Gene 7019] {aka MTDPS15, MTTF1, MTTFA, TCF6, TCF6L1, TCF6L2}, TOMM20 (translocase of outer mitochondrial membrane 20) [NCBI Gene 9804] {aka MAS20, MOM19, TOM20}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, PPARD (peroxisome proliferator activated receptor delta) [NCBI Gene 5467] {aka FAAR, NR1C2, NUC1, NUCI, NUCII, PPARB}, PLN (phospholamban) [NCBI Gene 5350] {aka CMD1P, CMH18, PLB}, MYL2 (myosin light chain 2) [NCBI Gene 4633] {aka CMH10, MFM12, MLC-2, MLC-2s/v, MLC-2v, MLC2}, TNNI3 (troponin I3, cardiac type) [NCBI Gene 7137] {aka CMD1FF, CMD2A, CMH7, RCM1, TNNC1, cTnI}, TBP (TATA-box binding protein) [NCBI Gene 6908] {aka GTF2D, GTF2D1, HDL4, SCA17, TBP1, TFIID}, SCN5A (sodium voltage-gated channel alpha subunit 5) [NCBI Gene 6331] {aka CDCD2, CMD1E, CMPD2, HB1, HB2, HBBD}
- **Diseases:** cytotoxicity (MESH:D064420), heart failure (MESH:D006333), arrhythmogenic disorders (MESH:D019571), MMP (MESH:D015433), cardiac disease (MESH:D006331), inherited cardiomyopathies (MESH:D009202), cardiotoxicity (MESH:D066126), iPSC-CM (MESH:D000092423)
- **Chemicals:** methanol (MESH:D000432), helium (MESH:D006371), pyruvate (MESH:D019289), Gal medium (-), Succinate (MESH:D019802), BSTFA (MESH:C047270), Oxygen (MESH:D010100), alpha-ketoglutarate (MESH:D007656), nitrogen (MESH:D009584), CCCP (MESH:D002258), L-lactic acid (MESH:D019344), L-ascorbic acid 2-phosphate (MESH:C011669), TCA (MESH:D014233), fatty acid (MESH:D005227), 2-DG (MESH:D003847), Triton X-100 (MESH:D017830), CO2 (MESH:D002245), rotenone (MESH:D012402), citrate (MESH:D019343), SYBR Green (MESH:C098022), MEA (MESH:D003543), ATP (MESH:D000255), water (MESH:D014867), MTBE (MESH:C043243), TBS (MESH:D013725), antimycin A (MESH:D000968), paraformaldehyde (MESH:C003043), CHIR99021 (MESH:C473711), lipid (MESH:D008055), TMRE (MESH:C110932), SDS (MESH:D012967), fumarate (MESH:D005650), TBS-T (MESH:C027647), PBS (MESH:D007854), oligomycin (MESH:D009840), Gal (MESH:D005690), Calcium (MESH:D002118), formaldehyde (MESH:D005557), GlutaMAX (MESH:C054122), Glu (MESH:D005947), DAPI (MESH:C007293), malate (MESH:C030298)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12930173/full.md

## References

49 references — full list in the complete paper: https://tomesphere.com/paper/PMC12930173/full.md

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Source: https://tomesphere.com/paper/PMC12930173