# Mechanistic modeling of amyloid dynamics relating to Alzheimer's disease progression

**Authors:** Andrzej Przekwas, Carly Norris, Harsha T. Garimella

PMC · DOI: 10.3389/fnagi.2026.1730480 · Frontiers in Aging Neuroscience · 2026-02-10

## TL;DR

This paper presents a detailed model of Alzheimer's disease progression that could help in early diagnosis and personalized treatment.

## Contribution

The novel contribution is an integrated mechanistic model of Alzheimer's progression combining amyloid dynamics and biomarker kinetics.

## Key findings

- The model integrates APP processing, Aβ peptide generation, aggregation, transport, and clearance mechanisms.
- It provides a framework for personalized precision neurology and pre-symptomatic diagnosis of Alzheimer's disease.
- The model supports the development of optimal therapeutic interventions for Alzheimer's.

## Abstract

The use of mechanistic models to support personalized medicine and precision diagnostics offers transformative potential for neurology. In this study, we developed a mechanistic model of Alzheimer's Disease progression (mAD) that integrates amyloid precursor protein (APP) processing, Aβ peptide generation, Aβ aggregation pathway modeling, Aβ transport, and whole-body biomarker kinetics (BxK) of Aβ40 and Aβ42 peptides, including enzymatic and microglial clearance mechanisms. The purpose of this work was to formulate an integrated, multiscale quantitative systems pharmacology (QSP) mechanistic model of Alzheimer's progression to advance neuroscience QSP frameworks. The model described in this work provides a basis for personalized precision neurology with the potential to facilitate pre-symptomatic AD diagnosis, thereby establishing early prevention strategies, and accelerating identification of optimal therapeutic interventions.

## Linked entities

- **Diseases:** Alzheimer's disease (MONDO:0004975)

## Full-text entities

- **Genes:** MME (membrane metalloendopeptidase) [NCBI Gene 4311] {aka CALLA, CD10, CMT2T, NEP, SCA43, SFE}, MXD1 (MAX dimerization protein 1) [NCBI Gene 4084] {aka BHLHC58, MAD, MAD1}, SH3BP5 (SH3 domain binding protein 5) [NCBI Gene 9467] {aka SAB, SH3BP-5}, CYLD (CYLD lysine 63 deubiquitinase) [NCBI Gene 1540] {aka BRSS, CDMT, CYLD1, CYLDI, EAC, FTDALS8}, ABCB1 (ATP binding cassette subfamily B member 1) [NCBI Gene 5243] {aka ABC20, CD243, CLCS, ENPAT, GP170, MDR1}, LINC02605 (long intergenic non-protein coding RNA 2605) [NCBI Gene 112935892] {aka AS, IL-7, IL-7-AS}, TSPAN31 (tetraspanin 31) [NCBI Gene 6302] {aka SAS}, APP (amyloid beta precursor protein) [NCBI Gene 351] {aka AAA, ABETA, ABPP, AD1, APPI, CTFgamma}, AGER (advanced glycosylation end-product specific receptor) [NCBI Gene 177] {aka RAGE, SCARJ1, sRAGE}, APOE (apolipoprotein E) [NCBI Gene 348] {aka AD2, APO-E, ApoE4, LDLCQ5, LPG}, IDE (insulin degrading enzyme) [NCBI Gene 3416] {aka INSULYSIN}, PGP (phosphoglycolate phosphatase) [NCBI Gene 283871] {aka AUM, G3PP, PGPase}, LRP1 (LDL receptor related protein 1) [NCBI Gene 4035] {aka A2MR, APOER, APR, CD91, DDH3, IGFBP-3R}, MAPT (microtubule associated protein tau) [NCBI Gene 4137] {aka DDPAC, FTD1, FTDP-17, MAPTL, MSTD, MTBT1}
- **Diseases:** hypertension (MESH:D006973), brain injuries (MESH:D001930), neurovascular dysfunction (MESH:D013901), toxicity (MESH:D064420), tauopathies (MESH:D024801), depression (MESH:D003866), Amyloid (MESH:C000718787), dementia (MESH:D003704), amyloid plaques (MESH:D058225), cognitive and behavioral deficits (MESH:D003072), inflammation (MESH:D007249), neurodegeneration (MESH:D019636), cancer (MESH:D009369), diabetes (MESH:D003920), neurotoxicity (MESH:D020258), addictions (MESH:D019966), MCI (MESH:D060825), AD (MESH:D000544), neuroinflammation (MESH:D000090862), TBI (MESH:D000070642), obesity (MESH:D009765), aggregation (MESH:D020914), cognitive symptoms (MESH:D019954), NFTs (MESH:D055956)
- **Chemicals:** Abeta17 - 40/42 (-), aducanumab (MESH:C000600266), lecanemab (MESH:C000612089), water (MESH:D014867)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12929527/full.md

## References

106 references — full list in the complete paper: https://tomesphere.com/paper/PMC12929527/full.md

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Source: https://tomesphere.com/paper/PMC12929527