# Microbiome composition of Drosophila suzukii varies across geographical regions

**Authors:** Matthew J. Medeiros, Allexa D. Burger, Donald K. Price, Joanne Y. Yew

PMC · DOI: 10.3389/fevo.2025.1696606 · Frontiers in ecology and evolution · 2026-02-24

## TL;DR

The study finds that the microbiome of the invasive fruit fly Drosophila suzukii varies by region, suggesting environmental factors shape its microbial community.

## Contribution

The paper reveals that D. suzukii incorporates region-specific microbes while maintaining conserved bacterial families, aiding its adaptability.

## Key findings

- Wild D. suzukii populations from different regions have distinct microbial compositions.
- Seven bacterial families are conserved across all D. suzukii populations.
- In Hawaiʻi, non-native D. suzukii has different bacterial communities from native species but similar fungal profiles.

## Abstract

Drosophila suzukii is a common agricultural pest in numerous parts of the world, costing more than $500 million annually in crop loss in the United States alone. Understanding the genetic and physiological mechanisms underlying its remarkable adaptability has been a major focus for the agricultural industry as well as evolutionary biologists. The microbiome, the community of microbes associated with host organisms, can play a pivotal role in local adaptation by improving host resilience to environmental stress and providing access to new sources of nutrition. Here, we test the hypothesis that the colonization of nonnative regions is associated with the incorporation of regionally-specific microbial taxa. We compare the microbiome profiles of wild-caught D. suzukii across five global sites, Asia, Europe, the United Kingdom, North America, and Hawaiʻi. We also compare microbial communities of D. suzukii found in Hawaiʻi to another local invasive species, D. immigrans, and native Hawaiian drosophilids. Our results reveal that wild-caught D. suzukii from Asia, Europe, the United Kingdom, North America, and the Hawaiian Islands exhibit distinct microbial compositions indicating that the environment is a stronger driver of microbiome composition than species identity. Seven bacterial families were conserved between all wild D. suzukii populations. Within Hawaiʻi, non-native D. suzukii bacterial communities differed from those of native Hawaiian Drosophila species as well as non-native D. immigrans. By contrast, fungal microbiome profiles between the Hawaiian Drosophila and two invasive species closely resemble each other. In sum, all populations of D. suzukii in this study contain a subset of conserved bacterial families but also incorporate local bacterial taxa. This strategy may contribute to the rapid range expansion of D. suzukii and enhance its ability to exploit new dietary sources.

## Linked entities

- **Species:** Drosophila suzukii (taxon 28584)

## Full-text entities

- **Chemicals:** sugar (MESH:D000073893), ethanol (MESH:D000431), polysaccharidess (-), lipid (MESH:D008055)
- **Species:** Musa acuminata (banana, species) [taxon 4641], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Agaricus bisporus (common mushroom, species) [taxon 5341], Platypodinae (ambrosia beetles, tribe) [taxon 122835], Citrobacter (genus) [taxon 544], Drosophila suzukii (species) [taxon 28584], Drosophila immigrans (species) [taxon 7250], Thitarodes sp. (species) [taxon 2841575], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Zymobacter (genus) [taxon 33073], Lactobacillaceae (family) [taxon 33958], Acetobacteraceae (family) [taxon 433], gut metagenome (species) [taxon 749906], Apis mellifera (bee, species) [taxon 7460], Drosophila melanogaster (fruit fly, species) [taxon 7227], Diptera (flies, order) [taxon 7147], Drosophilidae (pomace flies, family) [taxon 7214]

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12928383/full.md

## References

72 references — full list in the complete paper: https://tomesphere.com/paper/PMC12928383/full.md

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Source: https://tomesphere.com/paper/PMC12928383