# Effects of Age, Sex, and Social Network on Antibiotic Resistance Genes in the Gut Microbiome of Tibetan Macaques (Macaca thibetana)

**Authors:** Yue Ling, Dong‐Xin Yang, Ying‐Na Xia, Chuan‐Peng Bao, Fan Zhang, Xiao‐Juan Xu, Bing‐Hua Sun

PMC · DOI: 10.1002/ece3.73137 · Ecology and Evolution · 2026-02-20

## TL;DR

This study explores how age, sex, and social behavior influence antibiotic resistance genes in the gut microbiome of wild Tibetan macaques.

## Contribution

The study identifies specific antibiotic resistance genes influenced by age and social factors in a wild primate population.

## Key findings

- Multidrug, glycopeptide, and peptide resistance genes are most prevalent in Tibetan macaque gut microbiomes.
- Age significantly influences the abundance of specific antibiotic resistance genes like gryB, rpoB, and macB.
- Age is a key driver in the co-variation network between gut bacteria and antibiotic resistance genes.

## Abstract

The transmission and dissemination of antibiotic resistance genes (ARGs) have increasingly drawn global attention. However, our knowledge of the antibiotic resistance gene pool in wild primates' gut microbiomes and its influencing factors remains limited. In this study, we focus on a social group of Tibetan macaques (
Macaca thibetana
) in Huangshan, utilizing behavioral and metagenomic data to investigate the effects of host sex, age, and social network on the ARG profiles of the gut microbiome. Our results demonstrate a high diversity of ARGs in the gut microbiota of Tibetan macaques, with multidrug, glycopeptide, and peptide resistance genes being the most prevalent. Although host age, sex, and social networks did not significantly affect the overall diversity of ARGs, these factors were significantly correlated with the relative abundance of several highly abundant ARG types, including gryB, rpoB, macB, novA, efrA, patB, 
Staphylococcus aureus mupA conferring mupirocin resistance, RanA, and cdeA. Further analysis revealed extensive interactions between gut bacteria and ARGs, with age emerging as a potentially key factor in this covariation process. These findings provide new insights into the formation and transmission mechanisms of antibiotic resistance in the gut microbiome of wildlife, particularly in social primates.

Based on metagenomic and behavioral data from wild Tibetan macaques, this study reveals a unique gut resistome profile dominated by multidrug resistance genes. While individual factors like age, sex, and social centrality did not affect overall ARG diversity, they significantly influenced the abundance of specific, high‐prevalence ARGs. Furthermore, age emerged as a key driver of the co‐variation network between core gut bacteria and ARGs, providing new ecological insights into antibiotic resistance dynamics in wild social primates.

## Linked entities

- **Genes:** rpoB (RNA polymerase beta subunit) [NCBI Gene 800292], macB (macrolide ABC transporter permease/ATPase) [NCBI Gene 917704], Hnrnpk (heterogeneous nuclear ribonucleoprotein K) [NCBI Gene 15387], efrA (multidrug efflux ABC transporter subunit EfrA) [NCBI Gene 56742114], patB (promiscuous cystathionine / cystine beta-lyase / cysteine desulfhydrase) [NCBI Gene 937170], Mup1 (major urinary protein 1) [NCBI Gene 17840], ranA (GTP-binding nuclear protein Ran) [NCBI Gene 8628071], cdeA (multidrug efflux MATE transporter CdeA) [NCBI Gene 66353912]
- **Species:** Macaca thibetana (taxon 54602)

## Full-text entities

- **Genes:** ABL2 (ABL proto-oncogene 2, non-receptor tyrosine kinase) [NCBI Gene 27] {aka ABLL, ARG}, CYP19A1 (cytochrome P450 family 19 subfamily A member 1) [NCBI Gene 1588] {aka ARO, ARO1, CPV1, CYAR, CYP19, CYPXIX}
- **Diseases:** bacterial infections (MESH:D001424), infection (MESH:D007239), CD-HIT (MESH:D003424), Salmonella enterica  infections (MESH:D012480), ARGs (MESH:D004761)
- **Chemicals:** agarose (MESH:D012685), glycopeptide (MESH:D006020), rifampicin (MESH:D012293), fluoroquinolone (MESH:D024841), butyrate (MESH:D002087), tetracycline (MESH:D013752), bile acid (MESH:D001647), ARGs (-), fusidic acid (MESH:D005672), tetracyclines (MESH:D013754), testosterone (MESH:D013739), carbapenem (MESH:D015780), nitrogen (MESH:D009584), mupirocin (MESH:D016712), ceftiofur (MESH:C053503)
- **Species:** Anaerobutyricum (genus) [taxon 2569097], Capra hircus (domestic goat, species) [taxon 9925], Gallus gallus (bantam, species) [taxon 9031], Treponema (genus) [taxon 157], Oscillibacter (genus) [taxon 459786], Primates (primates, order) [taxon 9443], Homo sapiens (human, species) [taxon 9606], Clostridioides difficile (species) [taxon 1496], Clostridium (genus) [taxon 1485], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Bacteroides (genus) [taxon 816], Staphylococcus aureus (species) [taxon 1280], Alistipes (genus) [taxon 239759], Macaca fascicularis (crab eating macaque, species) [taxon 9541], Cercopithecidae (monkey, family) [taxon 9527], Macaca (macaque, genus) [taxon 9539], Ruminococcus (genus) [taxon 1263], Roseburia (genus) [taxon 841], Mycoplasma (genus) [taxon 2093], Helicobacter (genus) [taxon 209], Macaca thibetana (Pere David's macaque, species) [taxon 54602], Mus musculus (house mouse, species) [taxon 10090], Prevotella (genus) [taxon 838], Eubacterium (genus) [taxon 1730], Salmonella (genus) [taxon 590], Ailuropoda melanoleuca (giant panda, species) [taxon 9646], Faecalibacterium (genus) [taxon 216851]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12928124/full.md

## References

78 references — full list in the complete paper: https://tomesphere.com/paper/PMC12928124/full.md

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Source: https://tomesphere.com/paper/PMC12928124