# Regulation of autophagy‐mediated pathways by diet, physical activity, and sleep in Alzheimer's disease

**Authors:** Ajish Ariyath, Zoe Mputhia, Christopher Dougherty, Bushra Kaleelur Rahuman, W. M. A. D. Binosha Fernando, Belinda Brown, Samantha L. Gardener, Stephanie R. Rainey‐Smith, Ralph Martins, Prashant Bharadwaj

PMC · DOI: 10.1002/alz.71191 · Alzheimer's & Dementia · 2026-02-22

## TL;DR

This paper reviews how diet, exercise, and sleep affect autophagy in Alzheimer's disease, highlighting lifestyle's role in brain health.

## Contribution

The paper systematically reviews lifestyle-autophagy links in Alzheimer's and identifies gaps in biomarkers and translational models.

## Key findings

- Diet, physical activity, and sleep modulate autophagy, a key process disrupted in Alzheimer's disease.
- Mouse models and traditional autophagy markers have limitations in translating findings to human Alzheimer's biology.
- Brain-specific biomarkers and improved study designs are needed to evaluate lifestyle interventions' impact on autophagy.

## Abstract

Alzheimer's disease (AD) is a progressive, age‐related, neurodegenerative disorder marked by cognitive decline, memory loss, and accumulation of amyloid beta (Aβ) plaques and tau tangles. A key feature of AD is impaired protein homeostasis, often driven by autophagy dysfunction. Autophagy, a cellular degradation and recycling process, plays a vital role in maintaining neuronal health and is increasingly recognized as a therapeutic target in AD. Lifestyle factors such as diet, physical activity, and sleep can positively influence autophagy and support cognitive function. Intermittent fasting (IF) and calorie restriction (CR) activate autophagy and promote longevity; physical activity enhances cerebral blood flow and neurotrophic signaling; and adequate sleep supports autophagic processes, while sleep deprivation disrupts them. However, excessive autophagy may be detrimental. Understanding how lifestyle modulates autophagy is essential for developing non‐pharmacological strategies to delay or prevent AD. This review explores the mechanistic links between autophagy and lifestyle interventions to support brain health in aging.

Lifestyle factors modulate autophagy in AD: Diet, physical activity, and sleep significantly influence autophagy, a key cellular process disrupted in AD. However, the exact mechanisms remain unclear, and effects can vary depending on intervention type, duration, and model organism.Autophagy is a dynamic and context‐dependent process: Autophagy fluctuates naturally with time of day, nutritional status, and physical activity. Both overactivation and impairment can be detrimental, underscoring the need for a balanced autophagic response to maintain cellular health.Current models and markers have limitations: Mouse models may not fully translate to human AD biology, and commonly used autophagy markers like LC3 and p62 can be misleading without complementary techniques. Emerging human‐relevant models such as brain organoids and induced pluripotent stem cell‐derived neurons may improve translational accuracy.Measuring brain autophagy remains a major challenge: There are no reliable biomarkers for monitoring autophagy in the human brain, complicating efforts to evaluate lifestyle interventions. Future research must focus on identifying dynamic, brain‐specific biomarkers, and safe thresholds for autophagy activation.Lifestyle interventions show promise but require rigorous study design: Despite being safe and accessible, lifestyle interventions face challenges in trial design, adherence, and interpretation due to their complex, multidomain nature. Well‐powered, long‐term studies are needed to evaluate their true impact on autophagy and AD prevention.

Lifestyle factors modulate autophagy in AD: Diet, physical activity, and sleep significantly influence autophagy, a key cellular process disrupted in AD. However, the exact mechanisms remain unclear, and effects can vary depending on intervention type, duration, and model organism.

Autophagy is a dynamic and context‐dependent process: Autophagy fluctuates naturally with time of day, nutritional status, and physical activity. Both overactivation and impairment can be detrimental, underscoring the need for a balanced autophagic response to maintain cellular health.

Current models and markers have limitations: Mouse models may not fully translate to human AD biology, and commonly used autophagy markers like LC3 and p62 can be misleading without complementary techniques. Emerging human‐relevant models such as brain organoids and induced pluripotent stem cell‐derived neurons may improve translational accuracy.

Measuring brain autophagy remains a major challenge: There are no reliable biomarkers for monitoring autophagy in the human brain, complicating efforts to evaluate lifestyle interventions. Future research must focus on identifying dynamic, brain‐specific biomarkers, and safe thresholds for autophagy activation.

Lifestyle interventions show promise but require rigorous study design: Despite being safe and accessible, lifestyle interventions face challenges in trial design, adherence, and interpretation due to their complex, multidomain nature. Well‐powered, long‐term studies are needed to evaluate their true impact on autophagy and AD prevention.

## Linked entities

- **Proteins:** MAP1LC3A (microtubule associated protein 1 light chain 3 alpha), GTF2H1 (general transcription factor IIH subunit 1), MAPT (microtubule associated protein tau)
- **Diseases:** Alzheimer's disease (MONDO:0004975)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** PRKAA2 (protein kinase AMP-activated catalytic subunit alpha 2) [NCBI Gene 5563] {aka AMPK, AMPK2, AMPKa2, PRKAA}, PSEN1 (presenilin 1) [NCBI Gene 5663] {aka ACNINV3, AD3, CMD1U, FAD, PS-1, PS1}, Tfeb (transcription factor EB) [NCBI Gene 21425] {aka Tcfeb, bHLHe35}, Ghsr (growth hormone secretagogue receptor) [NCBI Gene 208188] {aka C530020I22Rik, GHRP, GHS-R, Ghsr1a}, HCRT (hypocretin neuropeptide precursor) [NCBI Gene 3060] {aka NRCLP1, OX, PPOX}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, FOXO3 (forkhead box O3) [NCBI Gene 2309] {aka AF6q21, FKHRL1, FKHRL1P2, FOXO2, FOXO3A}, GABARAPL2 (GABA type A receptor associated protein like 2) [NCBI Gene 11345] {aka ATG8, ATG8C, GATE-16, GATE16, GEF-2, GEF2}, Atg3 (autophagy related 3) [NCBI Gene 67841] {aka 2610016C12Rik, APG3, Apg3l, Atg3l, PC3-96}, BECN1 (beclin 1) [NCBI Gene 8678] {aka ATG6, VPS30, beclin1}, Rb1cc1 (RB1-inducible coiled-coil 1) [NCBI Gene 12421] {aka 2900055E04Rik, 5930404L04Rik, Cc1, FIP200, LaXp180}, VAMP8 (vesicle associated membrane protein 8) [NCBI Gene 8673] {aka EDB, VAMP-8}, RAB5A (RAB5A, member RAS oncogene family) [NCBI Gene 5868] {aka RAB5}, tor (tortured) [NCBI Gene 21977], Hcrt (hypocretin) [NCBI Gene 15171] {aka PPOX}, Pnpla2 (patatin-like phospholipase domain containing 2) [NCBI Gene 66853] {aka 0610039C21Rik, 1110001C14Rik, Atgl, TTS-2.2}, Pphln1 (periphilin 1) [NCBI Gene 223828] {aka CR, HSPC206, HSPC232}, Foxo3 (forkhead box O3) [NCBI Gene 56484] {aka 1110048B16Rik, 2010203A17Rik, FKHRL1, Fkhr2, Foxo3a}, Tsc2 (TSC complex subunit 2) [NCBI Gene 22084] {aka Nafld, Tcs2}, Tsc1 (TSC complex subunit 1) [NCBI Gene 64930], Rheb (Ras homolog enriched in brain) [NCBI Gene 19744] {aka Rheb1}, Trem2 (triggering receptor expressed on myeloid cells 2) [NCBI Gene 83433] {aka TREM-2, Trem2a, Trem2b, Trem2c}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, Igf1 (insulin-like growth factor 1) [NCBI Gene 16000] {aka C730016P09Rik, Igf-1, Igf-I}, Ctnnb1 (catenin beta 1) [NCBI Gene 12387] {aka Bfc, Catnb, Mesc}, MAP1LC3B (microtubule associated protein 1 light chain 3 beta) [NCBI Gene 81631] {aka ATG8F, LC3B, MAP1A/1BLC3, MAP1LC3B-a}, NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548] {aka AGTAVPRL, AII, AVP, C1orf7, CIAS1, CLR1.1}, ATG4B (autophagy related 4B cysteine peptidase) [NCBI Gene 23192] {aka APG4B, AUTL1, HsAPG4B}, Akt1s1 (AKT1 substrate 1) [NCBI Gene 67605] {aka 1110012J22Rik, Lobe, Lobel, PRAS40}, Snap29 (synaptosomal-associated protein 29) [NCBI Gene 67474] {aka 1300018G05Rik, Gs32}, Dnm1l (dynamin 1-like) [NCBI Gene 74006] {aka 6330417M19Rik, Dlp1, Dnmlp1, Drp1, python}, MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, Rptor (regulatory associated protein of MTOR, complex 1) [NCBI Gene 74370] {aka 4932417H02Rik, Rap, Raptor, mKIAA1303}, NUP62 (nucleoporin 62) [NCBI Gene 23636] {aka IBSN, SNDI, p62}, Hif1a (hypoxia inducible factor 1, alpha subunit) [NCBI Gene 15251] {aka HIF-1-alpha, HIF1-alpha, HIF1alpha, MOP1, bHLHe78}, Atg13 (autophagy related 13) [NCBI Gene 51897] {aka 1110053A20Rik, D2Ertd391e, Harbi1}, Stx17 (syntaxin 17) [NCBI Gene 67727] {aka 4833418L03Rik, 6330411F21Rik, 9030425C21Rik}, CREB1 (cAMP responsive element binding protein 1) [NCBI Gene 1385] {aka CREB, CREB-1}, Camkk2 (calcium/calmodulin-dependent protein kinase kinase 2, beta) [NCBI Gene 207565] {aka 6330570N16Rik, mKIAA0787}, Bcl2 (B cell leukemia/lymphoma 2) [NCBI Gene 12043] {aka Bcl-2, C430015F12Rik, D630044D05Rik, D830018M01Rik}, Foxo1 (forkhead box O1) [NCBI Gene 56458] {aka Afxh, FKHR, Fkhr1, Foxo1a}, Rictor (RPTOR independent companion of MTOR, complex 2) [NCBI Gene 78757] {aka 4921505C17Rik, 6030405M08Rik, AVO3, D530039E11Rik}, GABARAP (GABA type A receptor-associated protein) [NCBI Gene 11337] {aka ATG8A, GABARAP-a, MM46}, Atg14 (autophagy related 14) [NCBI Gene 100504663] {aka 4832427M01, Atg14L, D14Ertd114e, D14Ertd436e}, ATG101 (autophagy related 101) [NCBI Gene 60673] {aka C12orf44}, Sqstm1 (sequestosome 1) [NCBI Gene 18412] {aka A170, OSF-6, Osi, STAP, STONE14, p62}, TFEB (transcription factor EB) [NCBI Gene 7942] {aka ALPHATFEB, BHLHE35, TCFEB}, PSEN2 (presenilin 2) [NCBI Gene 5664] {aka AD3L, AD4, CMD1V, PS2, STM2}, App (amyloid beta precursor protein) [NCBI Gene 11820] {aka Abeta, Abpp, Adap, Ag, Cvap, E030013M08Rik}, BNIP3 (BCL2 interacting protein 3) [NCBI Gene 664] {aka HABON, NIP3}, ULK2 (unc-51 like autophagy activating kinase 2) [NCBI Gene 9706] {aka ATG1B, Unc51.2}, Retreg1 (reticulophagy regulator 1) [NCBI Gene 66270] {aka 1810015C04Rik, Fam134b, Retreg1d}, SIRT1 (sirtuin 1) [NCBI Gene 23411] {aka SIR2, SIR2L1, SIR2alpha}, Mlst8 (MTOR associated protein, LST8 homolog (S. cerevisiae)) [NCBI Gene 56716] {aka 0610033N12Rik, Gbl}, Bdnf (brain derived neurotrophic factor) [NCBI Gene 12064], MAP1LC3A (microtubule associated protein 1 light chain 3 alpha) [NCBI Gene 84557] {aka ATG8E, LC3, LC3A, MAP1ALC3, MAP1BLC3}, MAPT (microtubule associated protein tau) [NCBI Gene 4137] {aka DDPAC, FTD1, FTDP-17, MAPTL, MSTD, MTBT1}, Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, Sirt1 (sirtuin 1) [NCBI Gene 93759] {aka SIR2L1, Sir2, Sir2a, Sir2alpha}, SNF4 (AMP-activated serine/threonine-protein kinase regulatory subunit SNF4) [NCBI Gene 852763] {aka CAT3, SCI1}
- **Diseases:** ventricular enlargement (MESH:D006332), heart disease (MESH:D006331), amyloid (MESH:C000718787), Dementia (MESH:D003704), Sleep deprivation (MESH:D012892), obstructive sleep apnea (MESH:D020181), type 2 diabetes (MESH:D003924), Neuronal degeneration (MESH:D009410), hypercholesterolemia (MESH:D006937), cognitive decline (MESH:D003072), loss of memory (MESH:D008569), REM sleep deprivation (MESH:D020187), ketosis (MESH:D007662), CR (MESH:D002313), brain disorders (MESH:D001927), hippocampal injury (MESH:D001930), hypertension (MESH:D006973), REM (MESH:D020923), hypersomnolence (MESH:D006970), amyotrophic lateral sclerosis (MESH:D000690), epilepsy (MESH:D004827), carotid atherosclerosis (MESH:D002340), toxicity (MESH:D064420), CVDs (MESH:D002561), age- (MESH:D019588), protein misfolding disorders (MESH:D057165), IF (MESH:D007003), cognitive symptoms (MESH:D019954), MIND (MESH:D017086), stroke (MESH:D020521), overweight (MESH:D050177), white matter hyperintensities (MESH:D056784), language deficits (MESH:D007806), disorders (MESH:D009358), hypoxia (MESH:D000860), NFTs (MESH:D055956), thyroid injury (MESH:D013966), circadian rhythm disorders (MESH:D021081), mental distress (MESH:D012128), dyslipidemia (MESH:D050171), Sleep (MESH:D012893), Mitochondrial dysfunction (MESH:D028361), Parkinson's disease (MESH:D010300), muscle atrophy (MESH:D009133), inflammation (MESH:D007249), Neurodegenerative diseases (MESH:D019636), parasomnias (MESH:D020447), Disrupted sleep (MESH:D019958), lysosomal (MESH:D016464), traumatic brain injury (MESH:D000070642), atrophy (MESH:D001284), anxiety (MESH:D001007), neuroinflammation (MESH:D000090862), CNS (MESH:D002493), neural damage (MESH:D015441), Insomnia (MESH:D007319), behavioral abnormalities (MESH:D001523), synaptic failure (MESH:D051437), AD (MESH:D000544), MCI (MESH:D060825)
- **Chemicals:** lipid (MESH:D008055), LPSs (MESH:D008070), latrepirdine (MESH:C010119), Polyphenols (MESH:D059808), ATP (MESH:D000255), MCT (MESH:C000709826), AMP (MESH:D000249), oleuropein aglycone (MESH:C000625725), trehalose (MESH:D014199), serotonin (MESH:D012701), glucose (MESH:D005947), ROS (MESH:D017382), DHA (MESH:C027493), calcium (MESH:D002118), SCFA (MESH:D005232), dopamine (MESH:D004298), alcohol (MESH:D000438), Ca2 + (-), hydrogen sulfide (MESH:D006862), Melatonin (MESH:D008550), curcumin (MESH:D003474), acetoacetate (MESH:C016635), acetone (MESH:D000096), carbohydrate (MESH:D002241), fatty acid (MESH:D005227), selenium (MESH:D012643), butyrate (MESH:D002087), nilotinib (MESH:C498826), amino acids (MESH:D000596), acetylcholine (MESH:D000109), cholesterol (MESH:D002784), ketone bodies (MESH:D007657), resveratrol (MESH:D000077185), propofol (MESH:D015742), noradrenaline (MESH:D009638), glutamate (MESH:D018698), oxygen (MESH:D010100), zinc (MESH:D015032), EGCG (MESH:C045651), beta-hydroxybutyrate (MESH:D020155), vitamin D (MESH:D014807), ketone (MESH:D007659), lecanemab (MESH:C000612089), rapamycin (MESH:D020123), Omega-3 fatty acids (MESH:D015525), Pinocembrin (MESH:C016063), vitamin E (MESH:D014810), cortisol (MESH:D006854)
- **Species:** Curcuma longa (turmeric, species) [taxon 136217], gut metagenome (species) [taxon 749906], Drosophila melanogaster (fruit fly, species) [taxon 7227], Homo sapiens (human, species) [taxon 9606], Bifidobacterium (genus) [taxon 1678], Rattus norvegicus (brown rat, species) [taxon 10116], Lactobacillus (genus) [taxon 1578], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Caenorhabditis elegans (species) [taxon 6239], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** P301S, P13K, V717I, serine/threonine
- **Cell lines:** HT-22 — Mus musculus (Mouse), Transformed cell line (CVCL_0321), /6 — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_5985)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12928064/full.md

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12928064/full.md

## References

309 references — full list in the complete paper: https://tomesphere.com/paper/PMC12928064/full.md

---
Source: https://tomesphere.com/paper/PMC12928064