# Novel Mutations in KCNJ10 Gene Associated With SeSAME Syndrome: Rare Disorder With Possible Common Mutation

**Authors:** Shayan Shakeri, Sanaz Mohammadi, Forough Sadeghipour, Marjan Masoudi, Mona Entezam

PMC · DOI: 10.1002/mgg3.70194 · Molecular Genetics & Genomic Medicine · 2026-02-22

## TL;DR

This study identifies two new mutations in the KCNJ10 gene linked to SeSAME syndrome, a rare disorder causing seizures, hearing loss, and developmental delays.

## Contribution

The study reports two novel KCNJ10 mutations and their effects on protein structure and function in SeSAME syndrome.

## Key findings

- Two novel KCNJ10 mutations (p.A118T and p.Y323H) were identified in three Iranian families.
- The mutations affect different domains of the Kir4.1 protein, potentially impacting channel stability and function.
- The mutations are associated with SeSAME-like symptoms but without renal involvement.

## Abstract

Mutations in the KCNJ10 gene cause SeSAME syndrome, an autosomal recessive disorder characterised by seizures, sensorineural deafness, ataxia, intellectual impairment and electrolyte imbalances. KCNJ10 encodes an inwardly rectifying potassium channel Kir4.1, which is essential for preserving potassium ion homeostasis.

We assessed three Iranian families with SeSAME syndrome–like symptoms through whole‐exome sequencing (WES). Segregation analysis and Sanger sequencing were also used to confirm identified mutations. Additionally, bioinformatic tools were utilised to predict the pathogenicity of the variants.

We identified two novel KCNJ10 mutations, c.967 T>C (p.Y323H) and c.352G>A (p.A118T) in three families. While there was no evidence of renal involvement, the probands from these families displayed early‐onset seizures, ataxia, developmental delays and hearing abnormalities. Based on the Kir4.1 protein's structural modelling, the stability of the channel is influenced by both mutations. Precisely, p.A118T alters the transmembrane domain that is critical to channel operation, whereas p.Y323H modifies the cytoplasmic C‐terminal domain, which may compromise intracellular localisation and regulation.

Our findings can expand the spectrum of mutations in the KCNJ10 gene and provide insight into the genotype–phenotype correlation in the SeSAME syndrome.

Whole‐exome sequencing in three Iranian families identified two novel KCNJ10 variants (p.A118T, p.Y323H) associated with seizures, ataxia, developmental delay and hearing loss without renal involvement.

## Linked entities

- **Genes:** KCNJ10 (potassium inwardly rectifying channel subfamily J member 10) [NCBI Gene 3766]
- **Proteins:** KCNJ10 (potassium inwardly rectifying channel subfamily J member 10), KCNJ10 (potassium inwardly rectifying channel subfamily J member 10)
- **Diseases:** SeSAME syndrome (MONDO:0013005)

## Full-text entities

- **Genes:** Kcnj10 (potassium inwardly-rectifying channel, subfamily J, member 10) [NCBI Gene 29718], KCNJ10 (potassium inwardly rectifying channel subfamily J member 10) [NCBI Gene 3766] {aka BIRK-10, KCNJ13-PEN, KIR1.2, KIR4.1, SESAME}, ATP8A2 (ATPase phospholipid transporting 8A2) [NCBI Gene 51761] {aka ATP, ATPIB, CAMRQ4, IB, ML-1}, KCNJ16 (potassium inwardly rectifying channel subfamily J member 16) [NCBI Gene 3773] {aka BIR9, HKTD, KIR5.1}
- **Diseases:** renal tubulopathy (MESH:C562654), electrolyte (MESH:D014883), autism spectrum disorder (MESH:D000067877), dystonia (MESH:D004421), autosomal recessive disorder (MESH:D030342), Sensorineural deafness (MESH:D006319), Seizure (MESH:D012640), hearing abnormalities (MESH:D034381), neurological abnormalities (MESH:D009461), metabolic alkalosis (MESH:D000471), cerebellar impairment (MESH:D002526), EAST syndrome (MESH:C557674), nystagmus (MESH:D009759), Intellectual impairment (MESH:C565406), deterioration in motor skills (MESH:D019957), white matter abnormalities (MESH:D056784), PKD (MESH:C537180), brain hypoxia (MESH:D002534), renal involvement (MESH:C565423), intellectual disabilities (MESH:D008607), Ataxia (MESH:D001259), tremors (MESH:D014202), Epilepsy (MESH:D004827), disability (MESH:D009069), intellectual handicap (MESH:D009422), developmental delay (MESH:D002658), choreoathetosis (MESH:C567034), VUS (MESH:D065309)
- **Chemicals:** PIP2 (MESH:D019269), phospholipid (MESH:D010743), imidazole (MESH:C029899), Amino acids (MESH:D000596), urea (MESH:D014508), K+ (MESH:D011188), disulfide (MESH:D004220), sodium (MESH:D012964), PyMOL (-), creatinine (MESH:D003404), calcium (MESH:D002118), hydrogen (MESH:D006859)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116]
- **Mutations:** p.Y323H, C140R, G77R, R65P, p.A118T, c.352G>A, R297C, c.967 T>C, A118T, L218F, T164I, Y323H, R175Q, c.352G>A, c.967 T>C, G288S, I60T

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12927915/full.md

## References

27 references — full list in the complete paper: https://tomesphere.com/paper/PMC12927915/full.md

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Source: https://tomesphere.com/paper/PMC12927915