# DEC1 regulates osteoblast proliferation and differentiation via the RUNX2 signaling pathway: Insights into the molecular mechanism of DEC1-mediated transcriptional regulation in bone metabolism

**Authors:** Wenjie Qian, Kai Mei, Lei Zhu, Jinpeng Lv, Changjun Yun

PMC · DOI: 10.1515/biol-2025-1217 · Open Life Sciences · 2026-02-24

## TL;DR

This study explores how DEC1 influences bone metabolism by regulating the RUNX2 signaling pathway, affecting both osteoblast and osteoclast activity.

## Contribution

The study reveals a novel regulatory mechanism of DEC1 in bone metabolism through its interaction with the RUNX2 signaling pathway.

## Key findings

- DEC1 knockout mice showed reduced bone mineral density and structural parameters under ovariectomy conditions.
- DEC1 knockdown increased RUNX2 expression but impaired osteoblast differentiation in vitro.
- ChIP-seq confirmed RUNX2 enrichment near gene transcription start sites, linking DEC1 to RUNX2 activity.

## Abstract

Differentiated embryo chondrocyte 1 (Dec1, protein DEC1) plays a critical role in bone metabolism, but its interaction with the Runt-related transcription factor 2 (RUNX2) signaling pathway remains poorly understood. To investigate how DEC1 regulates osteoblast and osteoclast differentiation through the RUNX2 signaling pathway. To model estrogen deficiency–induced osteoporosis, ovariectomy (OVX) was performed in DEC1 knockout (DEC1−/−) and wild-type (DEC1+/+) mice, and bone parameters were assessed by micro-computed tomography (micro-CT). Primary bone marrow mesenchymal stem cells (BMSCs) were isolated for osteoblast induction, and RAW 264.7 macrophage-like cells were used for osteoclast differentiation. Flow cytometry was applied to assess lineage markers. RUNX2 expression and transcriptional activity were analyzed by qRT-PCR, Western blotting, GFP-tagging, and chromatin immunoprecipitation sequencing (ChIP-seq). DEC1−/− mice showed significant reductions in bone mineral density (BMD), bone volume fraction (BV/TV), trabecular number (Tb.N), and trabecular thickness (Tb.Th) under OVX. In vitro, DEC1 knockdown increased RUNX2 expression but impaired osteoblast differentiation, with reduced ALP, Osterix, and Osteocalcin expression. ChIP-seq confirmed RUNX2 enrichment near transcription start sites (TSS). Osteoclast markers (CD254, TCIRG1, ACP5) were also reduced in DEC1−/− mice. DEC1 regulates bone metabolism by modulating RUNX2 signaling, highlighting its dual role in osteoblast and osteoclast differentiation.

## Linked entities

- **Genes:** BHLHE40 (basic helix-loop-helix family member e40) [NCBI Gene 8553], RUNX2 (RUNX family transcription factor 2) [NCBI Gene 860], ALPP (alkaline phosphatase, placental) [NCBI Gene 250], SP7 (Sp7 transcription factor) [NCBI Gene 121340], bglap2 (bone gamma-carboxyglutamate (gla) protein (osteocalcin) 2) [NCBI Gene 100493875], TNFSF11 (TNF superfamily member 11) [NCBI Gene 8600], TCIRG1 (T cell immune regulator 1, ATPase H+ transporting V0 subunit a3) [NCBI Gene 10312], ACP5 (acid phosphatase 5, tartrate resistant) [NCBI Gene 54]
- **Proteins:** BHLHE40 (basic helix-loop-helix family member e40), RUNX2 (RUNX family transcription factor 2)
- **Diseases:** osteoporosis (MONDO:0005298)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Ifng (interferon gamma) [NCBI Gene 15978] {aka IFN-g, If2f, Ifg}, Eng (endoglin) [NCBI Gene 13805] {aka CD105, Endo, S-endoglin}, Mmp9 (matrix metallopeptidase 9) [NCBI Gene 17395] {aka B/MMP9, Clg4b, Gel B, MMP-9, pro-MMP-9}, alp (alopecia, recessive) [NCBI Gene 11691], Il6 (interleukin 6) [NCBI Gene 16193] {aka Il-6}, Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, Cat (catalase) [NCBI Gene 12359] {aka 2210418N07, Cas-1, Cas1, Cs-1}, Itgb3 (integrin beta 3) [NCBI Gene 16416] {aka CD61, GP3A, INGRB3}, Cd44 (CD44 antigen) [NCBI Gene 12505] {aka HERMES, Ly-24, Pgp-1}, Il1b (interleukin 1 beta) [NCBI Gene 16176] {aka IL-1beta, Il-1b}, Blnk (B cell linker) [NCBI Gene 17060] {aka BASH, Bca, Ly-57, Ly57, Lyw-57, SLP-65}, Sp7 (Sp7 transcription factor 7) [NCBI Gene 170574] {aka 6430578P22Rik, C22, Osx}, Tcirg1 (T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3) [NCBI Gene 27060] {aka ATP6N1C, ATP6a3, Atp6i, OC-116, OPTB1, Stv1}, Icam1 (intercellular adhesion molecule 1) [NCBI Gene 15894] {aka CD54, Icam-1, Ly-47, MALA-2}, Ptprc (protein tyrosine phosphatase receptor type C) [NCBI Gene 19264] {aka B220, CD45R, Cd45, L-CA, Ly-5, Lyt-4}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, Cd34 (CD34 antigen) [NCBI Gene 12490], Acp5 (acid phosphatase 5, tartrate resistant) [NCBI Gene 11433] {aka TRACP, TRAP}, Bglap2 (bone gamma-carboxyglutamate protein 2) [NCBI Gene 12097] {aka BGP2, Bglap1, Bgp, Og2, mOC-B}, Tnf (tumor necrosis factor) [NCBI Gene 21926] {aka DIF, TNF-a, TNF-alpha, TNFSF2, TNFalpha, Tnfa}, Ctnnb1 (catenin beta 1) [NCBI Gene 12387] {aka Bfc, Catnb, Mesc}, Runx2 (runt related transcription factor 2) [NCBI Gene 12393] {aka AML3, CBF-alpha-1, Cbf, Cbfa-1, Cbfa1, LS3}, Thy1 (thymus cell antigen 1, theta) [NCBI Gene 21838] {aka CD90, T25, Thy-1, Thy-1.2, Thy1.1, Thy1.2}, Tnfsf11 (tumor necrosis factor (ligand) superfamily, member 11) [NCBI Gene 21943] {aka Ly109l, ODF, OPGL, RANKL, Trance}, Itgb1 (integrin beta 1 (fibronectin receptor beta)) [NCBI Gene 16412] {aka 4633401G24Rik, CD29, Fnrb, Gm9863, gpIIa}
- **Diseases:** Osteoclast (MESH:D001862), inflammatory (MESH:D007249), fracture (MESH:D050723), cancer (MESH:D009369), estrogen (MESH:D056828), deficient (MESH:D007153), fractures of the hip, spine, and wrist (MESH:D000092503), osteoporosis (MESH:D010024), bone degeneration (MESH:D001847)
- **Chemicals:** water (MESH:D014867), TRIzol (MESH:C411644), ascorbic acid (MESH:D001205), SDS (MESH:D012967), alpha-MEM (MESH:C420642), glycine (MESH:D005998), ethanol (MESH:D000431), streptomycin (MESH:D013307), CO2 (MESH:D002245), cetylpyridinium chloride (MESH:D002594), paraformaldehyde (MESH:C003043), PVDF (MESH:C024865), PBS (MESH:D007854), calcium (MESH:D002118), Alizarin Red S (MESH:C004468), formaldehyde (MESH:D005557), aluminum (MESH:D000535), A4403 (-), penicillin (MESH:D010406), puromycin (MESH:D011691), beta-glycerophosphate (MESH:C031463), Lipofectamine (MESH:C086724), dexamethasone (MESH:D003907)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Abelson murine leukemia virus (species) [taxon 11788], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** RAW 264.7 — Mus musculus (Mouse), Mouse leukemia, Cancer cell line (CVCL_0493), ATCC  TIB-71 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023)

## Full text

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## Figures

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## References

23 references — full list in the complete paper: https://tomesphere.com/paper/PMC12927550/full.md

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Source: https://tomesphere.com/paper/PMC12927550