# Drug resistance mechanisms in Mycobacterium tuberculosis infection and challenges in vaccine development

**Authors:** Shuying Zhang, Juan Cheng, Yuanyuan Tang

PMC · DOI: 10.3389/fphar.2026.1762214 · Frontiers in Pharmacology · 2026-02-09

## TL;DR

This paper reviews how drug-resistant tuberculosis bacteria evade treatment and discusses new vaccine and therapy approaches to combat the disease.

## Contribution

The paper synthesizes Mtb drug resistance mechanisms and links them to vaccine development challenges and novel therapeutic strategies.

## Key findings

- Mtb resistance involves cell wall remodeling, metabolic changes, and immune evasion.
- Current vaccines like BCG have limited efficacy against drug-resistant TB.
- New drugs and host-directed therapies offer potential for improved treatment.

## Abstract

Drug-resistant Mycobacterium tuberculosis(Mtb) has become a global public health crisis, and its diverse drug resistance jointly reduces the effectiveness of antibacterial drugs. Mtb resistance is not merely genetic but involves a synergistic interplay of cell wall remodeling, metabolic reprogramming, and epigenetic regulation, all of which are closely linked to its capacity for immune evasion. These mechanisms lead to the failure of traditional treatments, exacerbating the prolongation of treatment duration, the increase in mortality rate and the spread of drug-resistant bacteria. Vaccine research has gradually become a key strategy for preventing and controlling the spread of drug-resistant tuberculosis. This review synthesizes these multifaceted resistance pathways and parallels them with the challenges in vaccine development, highlighting the limited efficacy of Bacillus Calmette-Guérin and the promise of next-generation candidates. It further explores the landscape of novel therapeutic strategies, including new drugs like bedaquiline and host-directed therapies. In the future, efforts should be focused on the development of multivalent vaccines, the integration of chemoimmunotherapy, and the sharing of global monitoring data to contribute to the ultimate goal of eliminating tuberculosis.

## Linked entities

- **Chemicals:** bedaquiline (PubChem CID 5388906)
- **Diseases:** tuberculosis (MONDO:0018076)
- **Species:** Mycobacterium tuberculosis (taxon 1773)

## Full-text entities

- **Genes:** DDN (dendrin) [NCBI Gene 23109], SIRT2 (sirtuin 2) [NCBI Gene 22933] {aka SIR2, SIR2L, SIR2L2}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, IL4R (interleukin 4 receptor) [NCBI Gene 3566] {aka CD124, IL-4RA, IL4RA}, KLHDC2 (kelch domain containing 2) [NCBI Gene 23588] {aka HCLP-1, HCLP1, LCP}, CGAS (cyclic GMP-AMP synthase) [NCBI Gene 115004] {aka C6orf150, D4, MB21D1, h-cGAS}, RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970] {aka AIF3BL3, CMCU, NFKB3, p65}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, CD274 (CD274 molecule) [NCBI Gene 29126] {aka ADMIO5, B7-H, B7H1, PD-L1, PDCD1L1, PDCD1LG1}, GFM1 (G elongation factor mitochondrial 1) [NCBI Gene 85476] {aka COXPD1, EFG, EFG1, EFGM, EGF1, GFM}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}, INHA (inhibin subunit alpha) [NCBI Gene 3623], TLR2 (toll like receptor 2) [NCBI Gene 7097] {aka CD282, TIL4}, IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, TYMS (thymidylate synthetase) [NCBI Gene 7298] {aka DKCD, HST422, TMS, TS}, Tlr4 (toll-like receptor 4) [NCBI Gene 21898] {aka Lps, Ly87, Ran/M1, Rasl2-8}, PLP1 (proteolipid protein 1) [NCBI Gene 5354] {aka GPM6C, HLD1, MMPL, PLP, PLP/DM20, PMD}, PAND1 (Panic disorder 1) [NCBI Gene 387572] {aka PAND}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, Ifng (interferon gamma) [NCBI Gene 15978] {aka IFN-g, If2f, Ifg}, TLR3 (toll like receptor 3) [NCBI Gene 7098] {aka CD283, IIAE2, IMD83}, RPSA (ribosomal protein SA) [NCBI Gene 3921] {aka 37LRP, 67LR, ICAS, LAMBR, LAMR1, LBP}, STING1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 340061] {aka ERIS, MITA, MPYS, NET23, SAVI, STING}, CD84 (CD84 molecule) [NCBI Gene 8832] {aka LY9B, SLAMF5, hCD84, mCD84}, STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772] {aka CANDF7, IMD31A, IMD31B, IMD31C, ISGF-3, STAT91}
- **Diseases:** infection (MESH:D007239), extensively drug-resistant tuberculosis (MESH:D054908), adult pulmonary TB (MESH:D014397), toxicity (MESH:D064420), bacterial (MESH:D001424), Mtb infection (MESH:D014376), Granuloma (MESH:D006099), HIV-infected (MESH:D015658), infectious diseases (MESH:D003141), inflammation (MESH:D007249), meningeal disease (MESH:D004194), MDR-TB (MESH:D018088), pulmonary disease (MESH:D008171), hypoxic (MESH:D002534), granulomatous lesions (MESH:D006105), hypoxia (MESH:D000860)
- **Chemicals:** PAS (MESH:D010131), Rv2652c (-), methylcitrate (MESH:C031605), delamanid (MESH:C516022), everolimus (MESH:D000068338), BDQ (MESH:C493870), arabinogalactan (MESH:C005653), fatty acids (MESH:D005227), RIF (MESH:D012293), linezolid (MESH:D000069349), FQ (MESH:D024841), glutathione (MESH:D005978), ATP (MESH:D000255), lipid (MESH:D008055), NAD + (MESH:D009243), trehalose (MESH:D014199), vitamin D (MESH:D014807), INH (MESH:D007538), pretomanid (MESH:C410767), PZA (MESH:D011718), nitrogen (MESH:D009584), pyrazinoic acid (MESH:C005296), SQ109 (MESH:C506841), withaferin A (MESH:C009684), streptomycin (MESH:D013307), carbon (MESH:D002244), mycolic acid (MESH:D009171), ADP (MESH:D000244), levofloxacin (MESH:D064704), D-cycloserine (MESH:D003523), NO (MESH:D009569), glyoxylate (MESH:C031150)
- **Species:** Mycobacterium tuberculosis variant bovis (biotype) [taxon 1765], Mycobacterium tuberculosis (species) [taxon 1773], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Homo sapiens (human, species) [taxon 9606], Mycobacterium tuberculosis variant bovis BCG (no rank) [taxon 33892], Bacillus sp. CG (species) [taxon 1196795], Mus musculus (house mouse, species) [taxon 10090], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Human immunodeficiency virus 1 (no rank) [taxon 11676]
- **Mutations:** P280L, D94G, serine/threonine, D595Y, S450L, H445Y, C15T, Ser315Thr, S315

## Full text

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## Figures

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## References

153 references — full list in the complete paper: https://tomesphere.com/paper/PMC12926377/full.md

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Source: https://tomesphere.com/paper/PMC12926377