# Personalized sepsis mortality prediction: An interpretable machine learning nomogram

**Authors:** Lulu Weng, Haidong Li, Yonglai Lv, Jiayi Luo, Zhenliang Wen, Jiawen Shi, Li Zhong

PMC · DOI: 10.1016/j.clinsp.2026.100872 · 2026-02-15

## TL;DR

A machine learning tool predicts sepsis mortality using seven clinical factors and offers interpretable results to help doctors identify high-risk patients early.

## Contribution

A novel interpretable machine learning nomogram for sepsis mortality prediction with SHAP-based interpretability.

## Key findings

- The nomogram achieved an AUC of 0.900 in the training cohort and 0.796 in the validation cohort.
- Seven clinical parameters were identified as independent mortality predictors.
- SHAP analysis confirmed the model's interpretability and clinical utility.

## Abstract

•A machine learning nomogram predicts in-hospital mortality in sepsis.•Seven clinical parameters were identified as independent mortality predictors.•The nomogram showed excellent discrimination with an AUC of 0.900.•SHAP analysis offers interpretability to the machine learning model.•The tool facilitates early risk stratification of high-risk patients.

A machine learning nomogram predicts in-hospital mortality in sepsis.

Seven clinical parameters were identified as independent mortality predictors.

The nomogram showed excellent discrimination with an AUC of 0.900.

SHAP analysis offers interpretability to the machine learning model.

The tool facilitates early risk stratification of high-risk patients.

Sepsis remains a major cause of mortality in ICU patients, requiring accurate prognostic tools for optimal management. This study aimed to develop and validate an interpretable machine learning-based nomogram for predicting in-hospital mortality in sepsis patients to guide clinical decision-making.

This retrospective cohort study included 407 adult sepsis patients from ICU admissions between January 2019 and December 2024. Patients were randomly divided into training (n = 284) and validation (n = 123) cohorts. A LASSO-based multivariate logistic regression was applied to construct a predictive nomogram.

Seven independent predictors emerged for in-hospital mortality: age, abdominal infection, vasopressor requirement, WBC, BNP, APACHE II score, and mechanical ventilation support. The nomogram showed strong discrimination with an AUC of 0.900 in the training cohort and 0.796 in the validation cohort. Calibration curves, decision curve analysis, and SHAP interpretation confirmed good model performance and clinical utility.

The novel machine learning-based nomogram provides a practical, interpretable risk assessment tool for early mortality prediction, potentially improving patient outcomes through enhanced clinical understanding and timely interventions in critically ill sepsis patients.

## Full-text entities

- **Genes:** MB (myoglobin) [NCBI Gene 4151] {aka MYOSB, PVALB}, NPPB (natriuretic peptide B) [NCBI Gene 4879] {aka BNP, Iso-ANP}, Aspartate Aminotransferase [NCBI Gene 882671], LDH [NCBI Gene 879877], F2 (coagulation factor II, thrombin) [NCBI Gene 2147] {aka PT, RPRGL2, THPH1}, SHROOM4 (shroom family member 4) [NCBI Gene 57477] {aka MRXSSDS, SHAP, shrm4}
- **Diseases:** fever (MESH:D005334), hypotension (MESH:D007022), pneumonia (MESH:D011014), Organ Failure (MESH:D009102), leukopenia (MESH:D007970), cardiovascular and respiratory failures (MESH:D012131), chronic kidney disease (MESH:D051436), diabetes (MESH:D003920), critical illness (MESH:D016638), inflammatory (MESH:D007249), Disease (MESH:D004194), respiratory infections (MESH:D012141), PICC (MESH:D056824), Bloodstream Infection (MESH:D018805), septic (MESH:D001170), Fungal infections (MESH:D009181), septic shock (MESH:D012772), APACHE II (MESH:D000071069), myocardial dysfunction (MESH:D006331), genitourinary infections (MESH:D014564), Abdominal Infection (MESH:D000007), myocardial depression (MESH:D003866), heart failure (MESH:D006333), leukocytosis (MESH:D007964), cardiac and cerebrovascular comorbidities (MESH:D002561), chills (MESH:D023341), immune dysfunction (MESH:D007154), bone marrow suppression (MESH:D001855), coagulation (MESH:D001778), infection (MESH:D007239), CRBSI (MESH:D055499), Death (MESH:D003643), Hypertension (MESH:D006973)
- **Chemicals:** Chloride (MESH:D002712), norepinephrine (MESH:D009638), Uric Acid (MESH:D014527), Bilirubin (MESH:D001663), lactate (MESH:D019344), Oxygen (MESH:D010100), Calcium (MESH:D002118), Creatinine (MESH:D003404), Glucose (MESH:D005947), Hydrogen (MESH:D006859), Urea Nitrogen (MESH:C530477), lipopolysaccharides (MESH:D008070), prednisone (MESH:D011241), Carbon Dioxide (MESH:D002245), Bicarbonate ion (MESH:D001639), Cl- (MESH:D002713), Na+ (MESH:D012964), K+ (MESH:D011188), DBil (-)
- **Species:** Pseudomonas aeruginosa (species) [taxon 287], Escherichia coli (E. coli, species) [taxon 562], Candida albicans (species) [taxon 5476], Bacillus (genus) [taxon 55087], Enterococcus faecium (species) [taxon 1352], Acinetobacter baumannii (species) [taxon 470], Enterobacteriaceae (enterobacteria, family) [taxon 543], Homo sapiens (human, species) [taxon 9606], Staphylococcus (genus) [taxon 1279], Stenotrophomonas maltophilia (species) [taxon 40324], Corynebacterium (genus) [taxon 1716]

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12924733/full.md

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Source: https://tomesphere.com/paper/PMC12924733