# Deficiency of Werner RecQ-type DNA helicase causes premature malnutrition in zebrafish

**Authors:** Kota Ujibe, Makoto Kashima, Miku Kataoka, Rintaro Shimada, Masashige Okamoto, Isao Kobayashi, Seiji Wada, Hiroki Matsuda, Akira Sakamoto, Hiromi Hirata

PMC · DOI: 10.1016/j.isci.2026.114760 · 2026-01-21

## TL;DR

Zebrafish lacking the WRN gene show early signs of malnutrition and organ defects, leading to premature death, which can be partially improved with more food.

## Contribution

This study identifies early-onset malnutrition and organ defects in zebrafish WRN mutants, revealing new insights into Werner syndrome pathology.

## Key findings

- Severe wrn mutants showed high DNA damage and apoptosis, causing gut and pancreatic defects.
- Severe wrn mutants exhibited low glucose, glycogen, and fat levels, indicating malnutrition.
- Increased food availability partially rescued the survival of wrn mutant zebrafish.

## Abstract

Werner syndrome is a genetic progeria characterized by premature aging symptoms, but its early-onset pathology remains unclear. We generated wrn truncation mutant (wrn-/-) zebrafish using CRISPR/Cas9 and identified two premature mortality phases: 7–21 and 60–90 days post-fertilization (dpf). Time-course transcriptomics revealed two wrn-/- subgroups. One showed the reduced expression of intestinal and pancreatic exocrine genes at 7–9 dpf, while the other maintained normal expression initially but eventually showed reduced pancreatic exocrine genes by 21–35 dpf. The prematurely dying wrn-/- larvae exhibited intestinal villi and pancreatic defects, along with DNA damage, cell-cycle arrest, and apoptosis. They also had lower glycogen, glucose, and fat levels compared to wild-type and late-dying wrn-/- larvae, suggesting malnutrition. Notably, excess feeding partially improved their survival. These findings reveal early pathological features in the zebrafish model of Werner syndrome.

•Zebrafish wrn truncated mutants segregate into mild and severe phenotypic classes•Severe wrn mutants showed high DNA damage and apoptosis, causing gut and pancreatic defects•Severe wrn mutants showed low glucose, glycogen, and fat levels, indicating malnutrition•Increased food availability partially rescued the survival of wrn mutant zebrafish

Zebrafish wrn truncated mutants segregate into mild and severe phenotypic classes

Severe wrn mutants showed high DNA damage and apoptosis, causing gut and pancreatic defects

Severe wrn mutants showed low glucose, glycogen, and fat levels, indicating malnutrition

Increased food availability partially rescued the survival of wrn mutant zebrafish

Developmental biology; Pathophysiology

## Linked entities

- **Genes:** WRN (WRN RecQ like helicase) [NCBI Gene 7486]
- **Diseases:** Werner syndrome (MONDO:0010196)
- **Species:** Danio rerio (taxon 7955)

## Full-text entities

- **Genes:** sqstm1 (sequestosome 1) [NCBI Gene 406452] {aka p62, sb:cb621, zgc:85784}, blm (BLM RecQ like helicase) [NCBI Gene 572540], amy2a (amylase alpha 2A) [NCBI Gene 406539] {aka amy3, wu:fb64c06, zgc:66270, zgc:77877}, cdkn1a (cyclin dependent kinase inhibitor 1A) [NCBI Gene 100151416] {aka cip1, p21, si:ch1073-48m5.2, waf1}, actb2 (actin, beta 2) [NCBI Gene 57935] {aka actbb, bact2, bactin2}, glb1 (galactosidase, beta 1) [NCBI Gene 548343] {aka zgc:110823}, ptf1a (pancreas associated transcription factor 1a) [NCBI Gene 368662] {aka PTF1, si:zc142h2.2, zgc:112216}, gclm (glutamate-cysteine ligase, modifier subunit) [NCBI Gene 333974] {aka GLCLR, id:ibd3182, wu:fi24c07, zgc:55903}, pcca (propionyl-CoA carboxylase subunit alpha) [NCBI Gene 437019] {aka fb92g02, wu:fb92g02, zgc:100925}, fabp2 (fatty acid binding protein 2, intestinal) [NCBI Gene 30708] {aka I-FABP, ifabp, zgc:92264}, mtor (mechanistic target of rapamycin kinase) [NCBI Gene 324254] {aka frap1, tor, wu:fc22h08}, fosab (Fos proto-oncogene, AP-1 transcription factor subunit b) [NCBI Gene 394198] {aka cb1065, fos, zgc:77885}, trnR (tRNA-Arg) [NCBI Gene 140515] {aka mttr}, recql5 (RecQ helicase-like 5) [NCBI Gene 566553] {aka recql5l}, bnip3lb (BCL2 interacting protein 3 like b) [NCBI Gene 554650] {aka bnip3l, nip3, zgc:110478}, optn (optineurin) [NCBI Gene 336159] {aka si:ch211-240l19.3, wu:fj52f04, zgc:66386, zgc:77868}, txnb (thioredoxin b) [NCBI Gene 436734] {aka txn, zgc:92903}, recql4 (RecQ helicase-like 4) [NCBI Gene 567383], tp53 (tumor protein p53) [NCBI Gene 30590] {aka brp53, drp53, etID22686.5, fb40d06, p53, wu:fb40d06}, fis1 (fission, mitochondrial 1) [NCBI Gene 797988] {aka im:6905231, si:dkey-1c17.5}, hk1 (hexokinase 1) [NCBI Gene 406791] {aka im:7148527, wu:fc09d08, wu:fc16e02, wu:fc21e02, wu:fq14b11, zgc:55790}, wrn (WRN RecQ like helicase) [NCBI Gene 569495], atg9a (ATG9 autophagy related 9 homolog A (S. cerevisiae)) [NCBI Gene 100009663] {aka zgc:158700}, apoa1a (apolipoprotein A-Ia) [NCBI Gene 30355] {aka Apo-AIa, ApoA-Ia, apoa, apoa1, cb49, wu:fb33f01}, mitfa (melanocyte inducing transcription factor a) [NCBI Gene 30080] {aka nacre, z3A.1}
- **Diseases:** Cockayne syndrome (MESH:D003057), abnormalities in the pancreas and intestine (MESH:D007410), Hutchinson-Gilford progeria syndrome (MESH:D011371), developmental malformations (MESH:C564254), metabolic (MESH:D008659), genetic disorders (MESH:D030342), nutritional deficits (MESH:D009748), Bloom Syndrome (MESH:D001816), XP (MESH:D014983), Deficiency of Werner RecQ-type DNA helicase (MESH:D014898), cataracts (MESH:D002386), digestive tissue defects (MESH:D004065), premature (MESH:C536271), A-T (MESH:D001260), infertility (MESH:D007246), arteriosclerosis (MESH:D001161), impaired (MESH:D060825), progeroid (MESH:C536423), emaciation (MESH:D004614), lethality (MESH:C536057), age-related diseases (MESH:D010024), gut and pancreatic defects (MESH:D010195), insulin-resistant diabetes (MESH:D007333), dermal atrophy (MESH:D001284), and bone (MESH:D001847), exocrine pancreatic insufficiency (MESH:D010188), mitochondrial damage (MESH:D028361), growth retardation (MESH:D006130), death (MESH:D003643), wrn deficiency (MESH:D007153), Malnutrition (MESH:D044342)
- **Chemicals:** isoamyl alcohol (MESH:C029683), isopropanol (MESH:D019840), Alexa Fluor  555 (MESH:C000608607), heparin (MESH:D006493), KCl (MESH:D011189), EdU (MESH:C022811), glutaraldehyde (MESH:D005976), eosin (MESH:D004801), NAD+ (MESH:D009243), PBS (MESH:D007854), Tween-20 (MESH:D011136), Glucose (MESH:D005947), Ethanol (MESH:D000431), levamisole (MESH:D007978), DMSO (MESH:D004121), water (MESH:D014867), phenol (MESH:D019800), Oil Red O (MESH:C011049), chloroform (MESH:D002725), Lipid (MESH:D008055), Glycogen (MESH:D006003), sucrose (MESH:D013395), EDTA (MESH:D004492), NP-40 (MESH:C010615), tricarboxylic acid (MESH:D014233), polyacrylamide (MESH:C016679), sapanisertib (MESH:C572449), fatty acid (MESH:D005227), Acetone (MESH:D000096), Triton X-100 (MESH:D017830), methanol (MESH:D000432), NaCl (MESH:D012965), H&amp;E (MESH:D006371), AcroPrep (-), Paraffin (MESH:D010232), formamide (MESH:C031066), Hematoxylin (MESH:D006416), Trisodium Citrate Dihydrate (MESH:D000077559), DIG (MESH:D004076)
- **Species:** Streptococcus pyogenes (species) [taxon 1314], Cottus asper (prickly sculpin, species) [taxon 214916], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606], Danio rerio (leopard danio, species) [taxon 7955], Escherichia coli (E. coli, species) [taxon 562]
- **Mutations:** T717Sfs*9, alanine residue at position 716, S3C, 3 M, 3P, 3Q
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12924724/full.md

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Source: https://tomesphere.com/paper/PMC12924724