# The hidden regulators: Non‐coding RNAs in KMT2A ‐rearranged acute lymphoblastic leukemia

**Authors:** Maria Augusta Poersch, Ana Carolina Rodrigues, Priscila Elias Ferreira Stricker, Alexandre Luiz Korte Azevedo, Daniel Pacheco Bruschi, Jaqueline Carvalho de Oliveira

PMC · DOI: 10.1002/ijc.70283 · International Journal of Cancer · 2025-12-08

## TL;DR

This paper explores how non-coding RNAs contribute to the development and progression of a high-risk type of leukemia called KMT2A-rearranged ALL, suggesting their potential use in diagnosis and treatment.

## Contribution

The study highlights the novel roles of non-coding RNAs in the molecular and epigenetic regulation of KMT2A-rearranged ALL.

## Key findings

- Non-coding RNAs, including circRNAs, lncRNAs, miRNAs, and eRNAs, regulate gene expression and chromatin dynamics in KMT2A-rearranged ALL.
- Fusion-derived circRNAs promote oncogenic signaling and chemoresistance in this leukemia subtype.
- Non-coding RNAs may serve as biomarkers for disease classification and treatment response prediction in KMT2A-rearranged ALL.

## Abstract

Acute lymphoblastic leukemia (ALL) driven by KMT2A rearrangements (KMT2A‐r) is an aggressive hematologic malignancy with poor prognosis and a high incidence in infants. While KMT2A fusion proteins drive leukemogenesis through transcriptional dysregulation, recent discoveries have highlighted the pivotal role of non‐coding RNAs (ncRNAs) in shaping the molecular and epigenetic landscape of this disease. These key regulators of gene expression influence chromatin dynamics, transcriptional activation, and post‐transcriptional control. Circular RNAs (circRNAs) contribute to genome instability and facilitate chromosomal translocations, while some fusion‐derived circRNAs (f‐circRNAs) sustain oncogenic signaling and promote chemoresistance. Long non‐coding RNAs (lncRNAs) orchestrate transcriptional programs that maintain leukemic stem cell properties and reinforce aberrant self‐renewal pathways. MicroRNAs (miRNAs) modulate critical oncogenic networks by regulating KMT2A fusion transcripts and downstream effectors, thereby impacting drug resistance, apoptosis, and proliferation. Meanwhile, enhancer RNAs (eRNAs) fine‐tune transcriptional activity and epigenetic regulation, influencing KMT2A target gene expression and chromatin accessibility. Collectively, these ncRNAs integrate into the complex regulatory circuits of KMT2A‐r ALL, revealing their potential as biomarkers for disease classification, risk stratification, and treatment response prediction. Understanding their interplay with KMT2A fusion proteins not only provides new insights into leukemogenesis but also highlights promising opportunities for therapeutic intervention and precision medicine in this high‐risk leukemia subtype.

## Linked entities

- **Genes:** KMT2A (lysine methyltransferase 2A) [NCBI Gene 4297]
- **Diseases:** acute lymphoblastic leukemia (MONDO:0004967)

## Full-text entities

- **Genes:** KMT2A (lysine methyltransferase 2A) [NCBI Gene 4297] {aka ALL-1, ALL1, CXXC7, GAS7, HRX, HTRX}
- **Diseases:** leukemia (MESH:D007938), ALL (MESH:D054198), hematologic malignancy (MESH:D019337)

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12922646/full.md

## References

98 references — full list in the complete paper: https://tomesphere.com/paper/PMC12922646/full.md

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Source: https://tomesphere.com/paper/PMC12922646